RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 CIB1Q99828 191 aa8.4□□□□□ -1.07
TOM1L1-220ENST00000575333 CCSER1Q9C0I3 900 aa8.4□□□□□ -1.07
TOM1L1-220ENST00000575333 KLC2Q9H0B6 622 aa8.4□□□□□ -1.07
TOM1L1-220ENST00000575333 ZMYND12Q9H0C1 365 aa8.4□□□□□ -1.07
TOM1L1-220ENST00000575333 GLT8D2Q9H1C3 349 aa8.4□□□□□ -1.07
TOM1L1-220ENST00000575333 RUBCNLQ9H714 662 aa8.4□□□□□ -1.07
TOM1L1-220ENST00000575333 CNNM2Q9H8M5 875 aa8.4□□□□□ -1.07
TOM1L1-220ENST00000575333 ZNF287Q9HBT7 754 aa8.4□□□□□ -1.07
TOM1L1-220ENST00000575333 XAB2Q9HCS7 855 aaKnown RBP8.4□□□□□ -1.07
TOM1L1-220ENST00000575333 IL1RAPL2Q9NP60 686 aa8.4□□□□□ -1.07
TOM1L1-220ENST00000575333 C12orf4Q9NQ89 552 aa8.4□□□□□ -1.07
TOM1L1-220ENST00000575333 DDX56Q9NY93 547 aaKnown RBP8.4□□□□□ -1.07
TOM1L1-220ENST00000575333 LRWD1Q9UFC0 647 aa8.4□□□□□ -1.07
TOM1L1-220ENST00000575333 KCNN3Q9UGI6 736 aa8.4□□□□□ -1.07
TOM1L1-220ENST00000575333 PCDHA13Q9Y5I0 950 aa8.4□□□□□ -1.07
TOM1L1-220ENST00000575333 ACEP12821 1306 aa8.4□□□□□ -1.07
TOM1L1-220ENST00000575333 DCCP43146 1447 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 C15orf38-AP3S2A0A0A6YYH1 394 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 KCNJ18B7U540 433 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 PEX1O43933 1283 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 PDE8AO60658 829 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 MAGEC1O60732 1142 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 CSDE1O75534 798 aaKnown RBP8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 CIB2O75838 187 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 MOCS3O95396 460 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 FUCA1P04066 466 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 CALM1P0DP23 149 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 CALM2P0DP24 149 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 CALM3P0DP25 149 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 ALAS1P13196 640 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 CDH2P19022 906 aaPredicted RBP8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 KPNA1P52294 538 aaPredicted RBP8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 GNG2P59768 71 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 TFAP4Q01664 338 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 LRRC63Q05C16 580 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 MGAT5Q09328 741 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 C19orf57Q0VDD7 668 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 NFE2L1Q14494 772 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 KCNJ12Q14500 433 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 PPP2R5BQ15173 497 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 CLUL1Q15846 466 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 CERKLQ49MI3 558 aaPredicted RBP8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 NADK2Q4G0N4 442 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 PPP6R3Q5H9R7 873 aaPredicted RBP8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 CCNJQ5T5M9 372 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 KLHDC7AQ5VTJ3 777 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 PPP4R4Q6NUP7 873 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 FAM117BQ6P1L5 589 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 FAM122CQ6P4D5 195 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 UGT2A3Q6UWM9 527 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 CYP4V2Q6ZWL3 525 aaPredicted RBP8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 ARPINQ7Z6K5 226 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 NOSTRINQ8IVI9 506 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 NDUFAF2Q8N183 169 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 CHCHD4Q8N4Q1 142 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 MARVELD2Q8N4S9 558 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 ANKRD53Q8N9V6 530 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 RNF169Q8NCN4 708 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 ZFP28Q8NHY6 868 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 BRSK1Q8TDC3 778 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 RAPGEF4Q8WZA2 1011 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 GLMNQ92990 594 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 RUNDC3BQ96NL0 473 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 NLRP3Q96P20 1036 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 TGS1Q96RS0 853 aaKnown RBP8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 INO80BQ9C086 356 aaPredicted RBP8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 SLC12A5Q9H2X9 1139 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 MARCH7Q9H992 704 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 EHMT1Q9H9B1 1298 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 DIABLOQ9NR28 239 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 HMGXB4Q9UGU5 601 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 VANGL2Q9ULK5 521 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 DOLKQ9UPQ8 538 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 FMN2Q9NZ56 1722 aa8.39□□□□□ -1.07
TOM1L1-220ENST00000575333 A0A1W2PQ67 120 aa8.38□□□□□ -1.07
TOM1L1-220ENST00000575333 H7C1D1 291 aa8.38□□□□□ -1.07
TOM1L1-220ENST00000575333 K7EPI3 171 aa8.38□□□□□ -1.07
TOM1L1-220ENST00000575333 RNF225M0QZC1 329 aaPredicted RBP8.38□□□□□ -1.07
TOM1L1-220ENST00000575333 MAGEB2O15479 319 aa8.38□□□□□ -1.07
TOM1L1-220ENST00000575333 SURF6O75683 361 aaKnown RBP8.38□□□□□ -1.07
TOM1L1-220ENST00000575333 ALX3O95076 343 aa8.38□□□□□ -1.07
TOM1L1-220ENST00000575333 POLR3DP05423 398 aaPredicted RBP8.38□□□□□ -1.07
TOM1L1-220ENST00000575333 TCEA1P23193 301 aaKnown RBP8.38□□□□□ -1.07
TOM1L1-220ENST00000575333 CFL1P23528 166 aaKnown RBP8.38□□□□□ -1.07
TOM1L1-220ENST00000575333 TBXAS1P24557 533 aaPredicted RBP8.38□□□□□ -1.07
TOM1L1-220ENST00000575333 ADSLP30566 484 aaPredicted RBP8.38□□□□□ -1.07
TOM1L1-220ENST00000575333 IST1P53990 364 aa8.38□□□□□ -1.07
TOM1L1-220ENST00000575333 VCPP55072 806 aaKnown RBP8.38□□□□□ -1.07
TOM1L1-220ENST00000575333 C21orf59P57076 290 aa8.38□□□□□ -1.07
TOM1L1-220ENST00000575333 TAGLNQ01995 201 aaKnown RBP8.38□□□□□ -1.07
TOM1L1-220ENST00000575333 KLHL38Q2WGJ6 581 aa8.38□□□□□ -1.07
TOM1L1-220ENST00000575333 KCTD21Q4G0X4 260 aa8.38□□□□□ -1.07
TOM1L1-220ENST00000575333 TJAP1Q5JTD0 557 aa8.38□□□□□ -1.07
TOM1L1-220ENST00000575333 IDO2Q6ZQW0 420 aa8.38□□□□□ -1.07
TOM1L1-220ENST00000575333 RGS9BPQ6ZS82 235 aa8.38□□□□□ -1.07
TOM1L1-220ENST00000575333 PEX26Q7Z412 305 aa8.38□□□□□ -1.07
TOM1L1-220ENST00000575333 LILRB2Q8N423 598 aa8.38□□□□□ -1.07
TOM1L1-220ENST00000575333 DDX54Q8TDD1 881 aaKnown RBP8.38□□□□□ -1.07
TOM1L1-220ENST00000575333 SCFD2Q8WU76 684 aa8.38□□□□□ -1.07
TOM1L1-220ENST00000575333 TRIM63Q969Q1 353 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms