RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 SUGP1Q8IWZ8 645 aaKnown RBP10.85□□□□□ -0.67
RPA1-206ENST00000573994 RSAD2Q8WXG1 361 aa10.85□□□□□ -0.67
RPA1-206ENST00000573994 DHX58Q96C10 678 aa10.85□□□□□ -0.67
RPA1-206ENST00000573994 FAM122AQ96E09 287 aa10.85□□□□□ -0.67
RPA1-206ENST00000573994 SUSD3Q96L08 255 aa10.85□□□□□ -0.67
RPA1-206ENST00000573994 MFSD14AQ96MC6 490 aa10.85□□□□□ -0.67
RPA1-206ENST00000573994 TSPAN18Q96SJ8 248 aa10.85□□□□□ -0.67
RPA1-206ENST00000573994 ST6GALNAC4Q9H4F1 302 aa10.85□□□□□ -0.67
RPA1-206ENST00000573994 PLEKHA5Q9HAU0 1116 aa10.85□□□□□ -0.67
RPA1-206ENST00000573994 HCFC1R1Q9NWW0 138 aa10.85□□□□□ -0.67
RPA1-206ENST00000573994 FBXL5Q9UKA1 691 aa10.85□□□□□ -0.67
RPA1-206ENST00000573994 CPSF3Q9UKF6 684 aaKnown RBP10.85□□□□□ -0.67
RPA1-206ENST00000573994 UBQLN1Q9UMX0 589 aaKnown RBP10.85□□□□□ -0.67
RPA1-206ENST00000573994 TIMM13Q9Y5L4 95 aaPredicted RBP10.85□□□□□ -0.67
RPA1-206ENST00000573994 BACE2Q9Y5Z0 518 aa10.85□□□□□ -0.67
RPA1-206ENST00000573994 VWA8A3KMH1 1905 aa10.85□□□□□ -0.67
RPA1-206ENST00000573994 C2orf16Q68DN1 1984 aa10.85□□□□□ -0.67
RPA1-206ENST00000573994 WDR27A2RRH5 827 aa10.84□□□□□ -0.67
RPA1-206ENST00000573994 SYN3O14994 580 aa10.84□□□□□ -0.67
RPA1-206ENST00000573994 XYLBO75191 536 aa10.84□□□□□ -0.67
RPA1-206ENST00000573994 PAPLNO95428 1278 aa10.84□□□□□ -0.67
RPA1-206ENST00000573994 FSHRP23945 695 aa10.84□□□□□ -0.67
RPA1-206ENST00000573994 ADSSP30520 456 aa10.84□□□□□ -0.67
RPA1-206ENST00000573994 LRPAP1P30533 357 aa10.84□□□□□ -0.67
RPA1-206ENST00000573994 TMEM132DQ14C87 1099 aa10.84□□□□□ -0.67
RPA1-206ENST00000573994 CTXN3Q4LDR2 81 aa10.84□□□□□ -0.67
RPA1-206ENST00000573994 L1TD1Q5T7N2 865 aaKnown RBP10.84□□□□□ -0.67
RPA1-206ENST00000573994 ZNF280DQ6N043 979 aa10.84□□□□□ -0.67
RPA1-206ENST00000573994 SHC4Q6S5L8 630 aa10.84□□□□□ -0.67
RPA1-206ENST00000573994 RTL10Q7L3V2 364 aa10.84□□□□□ -0.67
RPA1-206ENST00000573994 UBALD2Q8IYN6 164 aa10.84□□□□□ -0.67
RPA1-206ENST00000573994 GLIS3Q8NEA6 775 aa10.84□□□□□ -0.67
RPA1-206ENST00000573994 ZSWIM2Q8NEG5 633 aa10.84□□□□□ -0.67
RPA1-206ENST00000573994 NOC3LQ8WTT2 800 aaKnown RBP10.84□□□□□ -0.67
RPA1-206ENST00000573994 POMGNT1Q8WZA1 660 aa10.84□□□□□ -0.67
RPA1-206ENST00000573994 HPS3Q969F9 1004 aa10.84□□□□□ -0.67
RPA1-206ENST00000573994 HVCN1Q96D96 273 aa10.84□□□□□ -0.67
RPA1-206ENST00000573994 SAAL1Q96ER3 474 aa10.84□□□□□ -0.67
RPA1-206ENST00000573994 CHAMP1Q96JM3 812 aa10.84□□□□□ -0.67
RPA1-206ENST00000573994 FAM84AQ96KN4 292 aa10.84□□□□□ -0.67
RPA1-206ENST00000573994 ACCSQ96QU6 501 aa10.84□□□□□ -0.67
RPA1-206ENST00000573994 KCNK12Q9HB15 430 aa10.84□□□□□ -0.67
RPA1-206ENST00000573994 PANK4Q9NVE7 773 aa10.84□□□□□ -0.67
RPA1-206ENST00000573994 SEL1LQ9UBV2 794 aa10.84□□□□□ -0.67
RPA1-206ENST00000573994 AGO2Q9UKV8 859 aaKnown RBP10.84□□□□□ -0.67
RPA1-206ENST00000573994 MYH11P35749 1972 aa10.83□□□□□ -0.68
RPA1-206ENST00000573994 FRMD3A2A2Y4 597 aa10.83□□□□□ -0.68
RPA1-206ENST00000573994 H7C4K7 107 aa10.83□□□□□ -0.68
RPA1-206ENST00000573994 PRRG1O14668 218 aa10.83□□□□□ -0.68
RPA1-206ENST00000573994 NARSO43776 548 aaKnown RBP10.83□□□□□ -0.68
RPA1-206ENST00000573994 CUTAO60888 179 aa10.83□□□□□ -0.68
RPA1-206ENST00000573994 PPP6R2O75170 966 aa10.83□□□□□ -0.68
RPA1-206ENST00000573994 HNRNPA1P09651 372 aaKnown RBP eCLIP10.83□□□□□ -0.68
RPA1-206ENST00000573994 OR4Q2P0C623 313 aa10.83□□□□□ -0.68
RPA1-206ENST00000573994 CYP3A5P20815 502 aa10.83□□□□□ -0.68
RPA1-206ENST00000573994 HOXA9P31269 272 aa10.83□□□□□ -0.68
RPA1-206ENST00000573994 ME1P48163 572 aa10.83□□□□□ -0.68
RPA1-206ENST00000573994 ASIC1P78348 528 aa10.83□□□□□ -0.68
RPA1-206ENST00000573994 DNM1Q05193 864 aaKnown RBP10.83□□□□□ -0.68
RPA1-206ENST00000573994 ZBTB6Q15916 424 aa10.83□□□□□ -0.68
RPA1-206ENST00000573994 SPATA1Q5VX52 437 aa10.83□□□□□ -0.68
RPA1-206ENST00000573994 SLC8B1Q6J4K2 584 aa10.83□□□□□ -0.68
RPA1-206ENST00000573994 DSTYKQ6XUX3 929 aa10.83□□□□□ -0.68
RPA1-206ENST00000573994 EFCAB13Q8IY85 973 aa10.83□□□□□ -0.68
RPA1-206ENST00000573994 FBXL6Q8N531 539 aa10.83□□□□□ -0.68
RPA1-206ENST00000573994 APPL2Q8NEU8 664 aa10.83□□□□□ -0.68
RPA1-206ENST00000573994 BEST2Q8NFU1 509 aa10.83□□□□□ -0.68
RPA1-206ENST00000573994 ITFG1Q8TB96 612 aa10.83□□□□□ -0.68
RPA1-206ENST00000573994 KCNG4Q8TDN1 519 aa10.83□□□□□ -0.68
RPA1-206ENST00000573994 ING5Q8WYH8 240 aa10.83□□□□□ -0.68
RPA1-206ENST00000573994 FAM213AQ9BRX8 229 aa10.83□□□□□ -0.68
RPA1-206ENST00000573994 STRA6Q9BX79 667 aa10.83□□□□□ -0.68
RPA1-206ENST00000573994 TNMDQ9H2S6 317 aa10.83□□□□□ -0.68
RPA1-206ENST00000573994 EPS15L1Q9UBC2 864 aa10.83□□□□□ -0.68
RPA1-206ENST00000573994 EXOC7Q9UPT5 735 aa10.83□□□□□ -0.68
RPA1-206ENST00000573994 GOLGA8IPA6NC78 632 aa10.82□□□□□ -0.68
RPA1-206ENST00000573994 GOLGA8JA6NMD2 632 aa10.82□□□□□ -0.68
RPA1-206ENST00000573994 M0QZQ0 153 aa10.82□□□□□ -0.68
RPA1-206ENST00000573994 SPTLC1O15269 473 aa10.82□□□□□ -0.68
RPA1-206ENST00000573994 XPOTO43592 962 aaKnown RBP10.82□□□□□ -0.68
RPA1-206ENST00000573994 TBC1D4O60343 1298 aa10.82□□□□□ -0.68
RPA1-206ENST00000573994 PRPF6O94906 941 aaKnown RBP10.82□□□□□ -0.68
RPA1-206ENST00000573994 SEC24AO95486 1093 aa10.82□□□□□ -0.68
RPA1-206ENST00000573994 ADRB2P07550 413 aa10.82□□□□□ -0.68
RPA1-206ENST00000573994 CPB1P15086 417 aa10.82□□□□□ -0.68
RPA1-206ENST00000573994 PAX3P23760 479 aa10.82□□□□□ -0.68
RPA1-206ENST00000573994 CASP1P29466 404 aa10.82□□□□□ -0.68
RPA1-206ENST00000573994 ELF1P32519 619 aa10.82□□□□□ -0.68
RPA1-206ENST00000573994 AARSP49588 968 aaKnown RBP eCLIP10.82□□□□□ -0.68
RPA1-206ENST00000573994 CDR1P51861 262 aa10.82□□□□□ -0.68
RPA1-206ENST00000573994 WNT7BP56706 349 aa10.82□□□□□ -0.68
RPA1-206ENST00000573994 POU5F1Q01860 360 aaKnown RBP10.82□□□□□ -0.68
RPA1-206ENST00000573994 YWHAHQ04917 246 aaPredicted RBP10.82□□□□□ -0.68
RPA1-206ENST00000573994 TDGQ13569 410 aa10.82□□□□□ -0.68
RPA1-206ENST00000573994 MRPL58Q14197 206 aaKnown RBP10.82□□□□□ -0.68
RPA1-206ENST00000573994 PABPC1LQ4VXU2 614 aaKnown RBP10.82□□□□□ -0.68
RPA1-206ENST00000573994 C9orf57Q5W0N0 161 aa10.82□□□□□ -0.68
RPA1-206ENST00000573994 ATL3Q6DD88 541 aa10.82□□□□□ -0.68
RPA1-206ENST00000573994 SLFN12LQ6IEE8 588 aa10.82□□□□□ -0.68
RPA1-206ENST00000573994 CRELD2Q6UXH1 353 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms