RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 DUSP4Q13115 394 aa9.37□□□□□ -0.91
CTDNEP1-203ENST00000570385 MTAPQ13126 283 aa9.37□□□□□ -0.91
CTDNEP1-203ENST00000570385 FZD5Q13467 585 aa9.37□□□□□ -0.91
CTDNEP1-203ENST00000570385 TMEM119Q4V9L6 283 aa9.37□□□□□ -0.91
CTDNEP1-203ENST00000570385 HYIQ5T013 277 aa9.37□□□□□ -0.91
CTDNEP1-203ENST00000570385 STXBP5Q5T5C0 1151 aa9.37□□□□□ -0.91
CTDNEP1-203ENST00000570385 VITQ6UXI7 678 aa9.37□□□□□ -0.91
CTDNEP1-203ENST00000570385 DSTYKQ6XUX3 929 aa9.37□□□□□ -0.91
CTDNEP1-203ENST00000570385 GPBP1Q86WP2 473 aa9.37□□□□□ -0.91
CTDNEP1-203ENST00000570385 MYCT1Q8N699 235 aa9.37□□□□□ -0.91
CTDNEP1-203ENST00000570385 TTC9BQ8N6N2 239 aa9.37□□□□□ -0.91
CTDNEP1-203ENST00000570385 SUMF1Q8NBK3 374 aa9.37□□□□□ -0.91
CTDNEP1-203ENST00000570385 ATAD1Q8NBU5 361 aa9.37□□□□□ -0.91
CTDNEP1-203ENST00000570385 ZSCAN18Q8TBC5 510 aaPredicted RBP9.37□□□□□ -0.91
CTDNEP1-203ENST00000570385 ATRIPQ8WXE1 791 aa9.37□□□□□ -0.91
CTDNEP1-203ENST00000570385 RUBCNQ92622 972 aa9.37□□□□□ -0.91
CTDNEP1-203ENST00000570385 SMARCD2Q92925 531 aa9.37□□□□□ -0.91
CTDNEP1-203ENST00000570385 TMEM209Q96SK2 561 aa9.37□□□□□ -0.91
CTDNEP1-203ENST00000570385 TIPINQ9BVW5 301 aa9.37□□□□□ -0.91
CTDNEP1-203ENST00000570385 OSBPL6Q9BZF3 934 aa9.37□□□□□ -0.91
CTDNEP1-203ENST00000570385 AVENQ9NQS1 362 aaPredicted RBP9.37□□□□□ -0.91
CTDNEP1-203ENST00000570385 ASAH2Q9NR71 780 aa9.37□□□□□ -0.91
CTDNEP1-203ENST00000570385 YIPF1Q9Y548 306 aa9.37□□□□□ -0.91
CTDNEP1-203ENST00000570385 CACNA1AO00555 2505 aa9.37□□□□□ -0.91
CTDNEP1-203ENST00000570385 PDCD11Q14690 1871 aaKnown RBP9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 DCHS1Q96JQ0 3298 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 A0A1W2PRU2 124 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 TTC26A0AVF1 554 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 TISP43B9A030 160 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 K7ENM7 598 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 M0QZQ0 153 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 ZNF263O14978 683 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 HNRNPDLO14979 420 aaKnown RBP9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 NCAM2O15394 837 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 FAM13AO94988 1023 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 OAZ2O95190 189 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 KRT18P05783 430 aaKnown RBP9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 UBA7P41226 1012 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 NCKAP1LP55160 1127 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 FOXK2Q01167 660 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 MCM6Q14566 821 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 KARSQ15046 597 aaKnown RBP9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 RABEP1Q15276 862 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 ZBTB6Q15916 424 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 ENOX2Q16206 610 aaKnown RBP9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 LPAL2Q16609 132 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 JADE1Q6IE81 842 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 USP37Q86T82 979 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 RASSF8Q8NHQ8 419 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 TTC8Q8TAM2 541 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 SHKBP1Q8TBC3 707 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 FAM3CQ92520 227 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 CLDN23Q96B33 292 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 RSPRY1Q96DX4 576 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 NELL2Q99435 816 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 MSTO1Q9BUK6 570 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 DNAJC25Q9H1X3 360 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 IKZF4Q9H2S9 585 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 RPF1Q9H9Y2 349 aaKnown RBP9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 LMAN1LQ9HAT1 526 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 PLEKHA5Q9HAU0 1116 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 ZNF334Q9HCZ1 680 aaPredicted RBP9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 LARSQ9P2J5 1176 aaKnown RBP9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 NCDNQ9UBB6 729 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 FBXO4Q9UKT5 387 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 TBX20Q9UMR3 447 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 UBQLN1Q9UMX0 589 aaKnown RBP9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 MRPS17Q9Y2R5 130 aaKnown RBP9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 KIF3AQ9Y496 699 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 PIAS3Q9Y6X2 628 aa9.36□□□□□ -0.91
CTDNEP1-203ENST00000570385 TICRRQ7Z2Z1 1910 aa9.35□□□□□ -0.91
CTDNEP1-203ENST00000570385 MED19A0JLT2 244 aaPredicted RBP9.35□□□□□ -0.91
CTDNEP1-203ENST00000570385 HEPACAM2A8MVW5 462 aa9.35□□□□□ -0.91
CTDNEP1-203ENST00000570385 ANKRD63C9JTQ0 380 aa9.35□□□□□ -0.91
CTDNEP1-203ENST00000570385 SPTLC1O15269 473 aa9.35□□□□□ -0.91
CTDNEP1-203ENST00000570385 NFICP08651 508 aa9.35□□□□□ -0.91
CTDNEP1-203ENST00000570385 PSMC3P17980 439 aa9.35□□□□□ -0.91
CTDNEP1-203ENST00000570385 PLCG1P19174 1290 aa9.35□□□□□ -0.91
CTDNEP1-203ENST00000570385 CCNE1P24864 410 aa9.35□□□□□ -0.91
CTDNEP1-203ENST00000570385 NMT1P30419 496 aaKnown RBP9.35□□□□□ -0.91
CTDNEP1-203ENST00000570385 LRPAP1P30533 357 aa9.35□□□□□ -0.91
CTDNEP1-203ENST00000570385 SOX9P48436 509 aa9.35□□□□□ -0.91
CTDNEP1-203ENST00000570385 ACOT2P49753 483 aa9.35□□□□□ -0.91
CTDNEP1-203ENST00000570385 EPHB3P54753 998 aa9.35□□□□□ -0.91
CTDNEP1-203ENST00000570385 MAPK8IP2Q13387 824 aaPredicted RBP9.35□□□□□ -0.91
CTDNEP1-203ENST00000570385 ZNF528Q3MIS6 628 aa9.35□□□□□ -0.91
CTDNEP1-203ENST00000570385 ZC2HC1CQ53FD0 456 aaPredicted RBP9.35□□□□□ -0.91
CTDNEP1-203ENST00000570385 ARL6IP4Q66PJ3 421 aaKnown RBP9.35□□□□□ -0.91
CTDNEP1-203ENST00000570385 OVOS1Q6IE37 1185 aa9.35□□□□□ -0.91
CTDNEP1-203ENST00000570385 SLC39A4Q6P5W5 647 aa9.35□□□□□ -0.91
CTDNEP1-203ENST00000570385 ERMP1Q7Z2K6 904 aa9.35□□□□□ -0.91
CTDNEP1-203ENST00000570385 DGLUCYQ7Z3D6 616 aa9.35□□□□□ -0.91
CTDNEP1-203ENST00000570385 MAP4K3Q8IVH8 894 aa9.35□□□□□ -0.91
CTDNEP1-203ENST00000570385 DNASE1L2Q92874 299 aa9.35□□□□□ -0.91
CTDNEP1-203ENST00000570385 IRF7Q92985 503 aa9.35□□□□□ -0.91
CTDNEP1-203ENST00000570385 CALML4Q96GE6 196 aa9.35□□□□□ -0.91
CTDNEP1-203ENST00000570385 ZFYVE19Q96K21 471 aa9.35□□□□□ -0.91
CTDNEP1-203ENST00000570385 LRRC3Q9BY71 257 aa9.35□□□□□ -0.91
CTDNEP1-203ENST00000570385 BLOC1S4Q9NUP1 217 aa9.35□□□□□ -0.91
CTDNEP1-203ENST00000570385 ZSCAN32Q9NX65 697 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms