RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 TADA2BQ86TJ2 420 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 HOOK3Q86VS8 718 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 NLGN2Q8NFZ4 835 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 SLC16A10Q8TF71 515 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 SREK1Q8WXA9 508 aaKnown RBP9.31□□□□□ -0.92
LINC00558-201ENST00000569422 HVCN1Q96D96 273 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 OTUD5Q96G74 571 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 SCLT1Q96NL6 688 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 NCAPGQ9BPX3 1015 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 PLVAPQ9BX97 442 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 PORCNQ9H237 461 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 NXF1Q9UBU9 619 aaKnown RBP9.31□□□□□ -0.92
LINC00558-201ENST00000569422 SLC12A6Q9UHW9 1150 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 FBXO9Q9UK97 447 aaPredicted RBP9.31□□□□□ -0.92
LINC00558-201ENST00000569422 CD2APQ9Y5K6 639 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 BHMG1C9JSJ3 638 aaPredicted RBP9.31□□□□□ -0.92
LINC00558-201ENST00000569422 HGSO14964 777 aaPredicted RBP9.31□□□□□ -0.92
LINC00558-201ENST00000569422 CAPSQ13938 189 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 PSMD6Q15008 389 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 SIX1Q15475 284 aaPredicted RBP9.31□□□□□ -0.92
LINC00558-201ENST00000569422 KYNUQ16719 465 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 TMEM63BQ5T3F8 832 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 RHPN2Q8IUC4 686 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 RNF149Q8NC42 400 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 SENP7Q9BQF6 1050 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 IMPG2Q9BZV3 1241 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 CTNNAL1Q9UBT7 734 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 PCYOX1Q9UHG3 505 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 AFG3L2Q9Y4W6 797 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 GSTTP1A0A1W2PQM5 241 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 ADM5C9JUS6 153 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 NOP56O00567 594 aaKnown RBP9.3□□□□□ -0.92
LINC00558-201ENST00000569422 FAM107AO95990 144 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 HSPA6P17066 643 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 GTF2H1P32780 548 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 ALDH5A1P51649 535 aaPredicted RBP9.3□□□□□ -0.92
LINC00558-201ENST00000569422 MYL6P60660 151 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 LIN9Q5TKA1 542 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 EFCAB13Q8IY85 973 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 ANKRD42Q8N9B4 389 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 PPM1EQ8WY54 764 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 CABS1Q96KC9 395 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 ELP3Q9H9T3 547 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.3□□□□□ -0.92
LINC00558-201ENST00000569422 A0A087WUV0 522 aaPredicted RBP9.3□□□□□ -0.92
LINC00558-201ENST00000569422 A6NNZ2 444 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 GOLGA8SH3BPF8 625 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 INO80B-WBP1J3KQ70 363 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 RASGRF2O14827 1237 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 POTEJP0CG39 1038 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 ITGA8P53708 1063 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 PLCB3Q01970 1234 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 HSDL1Q3SXM5 330 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 TUBB8Q3ZCM7 444 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 CYP4A22Q5TCH4 519 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 AGBL2Q5U5Z8 902 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 ANKS1BQ7Z6G8 1248 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 APOBEC3FQ8IUX4 373 aaKnown RBP9.3□□□□□ -0.92
LINC00558-201ENST00000569422 C1orf131Q8NDD1 294 aaKnown RBP9.3□□□□□ -0.92
LINC00558-201ENST00000569422 COPS5Q92905 334 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 PCYT2Q99447 389 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 PRMT1Q99873 361 aaKnown RBP9.3□□□□□ -0.92
LINC00558-201ENST00000569422 INO80BQ9C086 356 aaPredicted RBP9.3□□□□□ -0.92
LINC00558-201ENST00000569422 CDC42EP4Q9H3Q1 356 aaKnown RBP9.3□□□□□ -0.92
LINC00558-201ENST00000569422 SUDS3Q9H7L9 328 aaPredicted RBP9.3□□□□□ -0.92
LINC00558-201ENST00000569422 KCNK9Q9NPC2 374 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 ATAD5Q96QE3 1844 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 GOLGA6L7A0A1B0GV03 622 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 FZD9O00144 591 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 PPP1R12AO14974 1030 aaPredicted RBP9.3□□□□□ -0.92
LINC00558-201ENST00000569422 RIPK2O43353 540 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 DDNO94850 711 aaPredicted RBP9.3□□□□□ -0.92
LINC00558-201ENST00000569422 VIMP08670 466 aaKnown RBP9.3□□□□□ -0.92
LINC00558-201ENST00000569422 CD19P15391 556 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 CREB1P16220 341 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 NAMPTP43490 491 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 EIF3BP55884 814 aaKnown RBP9.3□□□□□ -0.92
LINC00558-201ENST00000569422 DYNLT1P63172 113 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 ADCY2Q08462 1091 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 CLUL1Q15846 466 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 CYP4F22Q6NT55 531 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 DCUN1D2Q6PH85 259 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 ZNF365Q70YC5 407 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 DYDC1Q8WWB3 177 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 C9orf72Q96LT7 481 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 MCEEQ96PE7 176 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 DHX33Q9H6R0 707 aaKnown RBP9.3□□□□□ -0.92
LINC00558-201ENST00000569422 C10orf88Q9H8K7 445 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 NRBP2Q9NSY0 501 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 DDX20Q9UHI6 824 aaKnown RBP9.3□□□□□ -0.92
LINC00558-201ENST00000569422 GGT7Q9UJ14 662 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 ZNF112Q9UJU3 913 aa9.3□□□□□ -0.92
LINC00558-201ENST00000569422 MAFBQ9Y5Q3 323 aaPredicted RBP9.3□□□□□ -0.92
LINC00558-201ENST00000569422 NFASCO94856 1347 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 SOWAHBA6NEL2 793 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 PMM2O15305 246 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 MEFVO15553 781 aaPredicted RBP9.29□□□□□ -0.92
LINC00558-201ENST00000569422 USP2O75604 605 aaPredicted RBP9.29□□□□□ -0.92
LINC00558-201ENST00000569422 MTA2O94776 668 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 IFNB1P01574 187 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms