RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 MUTP22033 750 aa12.91□□□□□ -0.34
GTF3C1-209ENST00000568569 CTHP32929 405 aa12.91□□□□□ -0.34
GTF3C1-209ENST00000568569 MCM4P33991 863 aa12.91□□□□□ -0.34
GTF3C1-209ENST00000568569 SOX9P48436 509 aa12.91□□□□□ -0.34
GTF3C1-209ENST00000568569 PLD1Q13393 1074 aa12.91□□□□□ -0.34
GTF3C1-209ENST00000568569 TRIM29Q14134 588 aa12.91□□□□□ -0.34
GTF3C1-209ENST00000568569 HAUS3Q68CZ6 603 aa12.91□□□□□ -0.34
GTF3C1-209ENST00000568569 RNF19BQ6ZMZ0 732 aa12.91□□□□□ -0.34
GTF3C1-209ENST00000568569 WDR5BQ86VZ2 330 aa12.91□□□□□ -0.34
GTF3C1-209ENST00000568569 DDX12PQ92771 950 aa12.91□□□□□ -0.34
GTF3C1-209ENST00000568569 RSPRY1Q96DX4 576 aa12.91□□□□□ -0.34
GTF3C1-209ENST00000568569 TBC1D32Q96NH3 1257 aa12.91□□□□□ -0.34
GTF3C1-209ENST00000568569 ACO2Q99798 780 aaKnown RBP12.91□□□□□ -0.34
GTF3C1-209ENST00000568569 MRPL4Q9BYD3 311 aaKnown RBP12.91□□□□□ -0.34
GTF3C1-209ENST00000568569 PTPRHQ9HD43 1115 aa12.91□□□□□ -0.34
GTF3C1-209ENST00000568569 MCF2P10911 925 aa12.9□□□□□ -0.34
GTF3C1-209ENST00000568569 MARCKSP29966 332 aaPredicted RBP12.9□□□□□ -0.34
GTF3C1-209ENST00000568569 YWHAHQ04917 246 aaPredicted RBP12.9□□□□□ -0.34
GTF3C1-209ENST00000568569 DMP1Q13316 513 aaPredicted RBP12.9□□□□□ -0.34
GTF3C1-209ENST00000568569 CCINQ13939 588 aa12.9□□□□□ -0.34
GTF3C1-209ENST00000568569 ANKRD1Q15327 319 aa12.9□□□□□ -0.34
GTF3C1-209ENST00000568569 SF3A2Q15428 464 aaKnown RBP12.9□□□□□ -0.34
GTF3C1-209ENST00000568569 WDR44Q5JSH3 913 aa12.9□□□□□ -0.34
GTF3C1-209ENST00000568569 N4BP2L1Q5TBK1 243 aaPredicted RBP12.9□□□□□ -0.34
GTF3C1-209ENST00000568569 TXNDC11Q6PKC3 985 aa12.9□□□□□ -0.34
GTF3C1-209ENST00000568569 HAUS6Q7Z4H7 955 aa12.9□□□□□ -0.34
GTF3C1-209ENST00000568569 TMC8Q8IU68 726 aa12.9□□□□□ -0.34
GTF3C1-209ENST00000568569 SYNPOQ8N3V7 929 aa12.9□□□□□ -0.34
GTF3C1-209ENST00000568569 BEST2Q8NFU1 509 aa12.9□□□□□ -0.34
GTF3C1-209ENST00000568569 C18orf25Q96B23 403 aaPredicted RBP12.9□□□□□ -0.34
GTF3C1-209ENST00000568569 LOXL4Q96JB6 756 aa12.9□□□□□ -0.34
GTF3C1-209ENST00000568569 OXCT2Q9BYC2 517 aaPredicted RBP12.9□□□□□ -0.34
GTF3C1-209ENST00000568569 BHMT2Q9H2M3 363 aa12.9□□□□□ -0.34
GTF3C1-209ENST00000568569 POLD4Q9HCU8 107 aa12.9□□□□□ -0.34
GTF3C1-209ENST00000568569 PCDHB8Q9UN66 801 aa12.9□□□□□ -0.34
GTF3C1-209ENST00000568569 ATRXP46100 2492 aa12.9□□□□□ -0.34
GTF3C1-209ENST00000568569 SDK1Q7Z5N4 2213 aa12.89□□□□□ -0.35
GTF3C1-209ENST00000568569 CCDC169A6NNP5 214 aa12.89□□□□□ -0.35
GTF3C1-209ENST00000568569 TM4SF5O14894 197 aa12.89□□□□□ -0.35
GTF3C1-209ENST00000568569 OR52Z1P0C646 297 aa12.89□□□□□ -0.35
GTF3C1-209ENST00000568569 ZNF806P0C7X5 589 aa12.89□□□□□ -0.35
GTF3C1-209ENST00000568569 NPTX2P47972 431 aa12.89□□□□□ -0.35
GTF3C1-209ENST00000568569 EPHB3P54753 998 aa12.89□□□□□ -0.35
GTF3C1-209ENST00000568569 PEX3P56589 373 aa12.89□□□□□ -0.35
GTF3C1-209ENST00000568569 ARHGAP29Q52LW3 1261 aa12.89□□□□□ -0.35
GTF3C1-209ENST00000568569 MPZL3Q6UWV2 235 aa12.89□□□□□ -0.35
GTF3C1-209ENST00000568569 ARID3BQ8IVW6 561 aaPredicted RBP12.89□□□□□ -0.35
GTF3C1-209ENST00000568569 TCHPQ9BT92 498 aa12.89□□□□□ -0.35
GTF3C1-209ENST00000568569 TARS2Q9BW92 718 aaKnown RBP12.89□□□□□ -0.35
GTF3C1-209ENST00000568569 LRRC3Q9BY71 257 aa12.89□□□□□ -0.35
GTF3C1-209ENST00000568569 ARRDC1-AS1Q9H2J1 176 aa12.89□□□□□ -0.35
GTF3C1-209ENST00000568569 TMEM134Q9H6X4 195 aa12.89□□□□□ -0.35
GTF3C1-209ENST00000568569 C2orf42Q9NWW7 574 aa12.89□□□□□ -0.35
GTF3C1-209ENST00000568569 GTSE1Q9NYZ3 720 aa12.89□□□□□ -0.35
GTF3C1-209ENST00000568569 ARHGAP28Q9P2N2 729 aa12.89□□□□□ -0.35
GTF3C1-209ENST00000568569 TICRRQ7Z2Z1 1910 aa12.89□□□□□ -0.35
GTF3C1-209ENST00000568569 LAMA1P25391 3075 aa12.89□□□□□ -0.35
GTF3C1-209ENST00000568569 CCDC163A0A0D9SF12 145 aa12.88□□□□□ -0.35
GTF3C1-209ENST00000568569 DPYSL4O14531 572 aa12.88□□□□□ -0.35
GTF3C1-209ENST00000568569 AXIN1O15169 862 aa12.88□□□□□ -0.35
GTF3C1-209ENST00000568569 RPP40O75818 363 aaKnown RBP12.88□□□□□ -0.35
GTF3C1-209ENST00000568569 OAZ2O95190 189 aa12.88□□□□□ -0.35
GTF3C1-209ENST00000568569 EPN2O95208 641 aa12.88□□□□□ -0.35
GTF3C1-209ENST00000568569 PROZP22891 400 aa12.88□□□□□ -0.35
GTF3C1-209ENST00000568569 ALDH1A3P47895 512 aa12.88□□□□□ -0.35
GTF3C1-209ENST00000568569 FOSBP53539 338 aa12.88□□□□□ -0.35
GTF3C1-209ENST00000568569 PLCB2Q00722 1185 aa12.88□□□□□ -0.35
GTF3C1-209ENST00000568569 ORC2Q13416 577 aaPredicted RBP12.88□□□□□ -0.35
GTF3C1-209ENST00000568569 PON2Q15165 354 aa12.88□□□□□ -0.35
GTF3C1-209ENST00000568569 STXBP5Q5T5C0 1151 aa12.88□□□□□ -0.35
GTF3C1-209ENST00000568569 STPG1Q5TH74 334 aa12.88□□□□□ -0.35
GTF3C1-209ENST00000568569 CACNA2D4Q7Z3S7 1137 aa12.88□□□□□ -0.35
GTF3C1-209ENST00000568569 NECAB1Q8N987 351 aa12.88□□□□□ -0.35
GTF3C1-209ENST00000568569 GAB3Q8WWW8 586 aa12.88□□□□□ -0.35
GTF3C1-209ENST00000568569 GTF3C6Q969F1 213 aa12.88□□□□□ -0.35
GTF3C1-209ENST00000568569 PGLYRP2Q96PD5 576 aa12.88□□□□□ -0.35
GTF3C1-209ENST00000568569 DNAJC25Q9H1X3 360 aa12.88□□□□□ -0.35
GTF3C1-209ENST00000568569 RXFP3Q9NSD7 469 aa12.88□□□□□ -0.35
GTF3C1-209ENST00000568569 OBP2AQ9NY56 170 aa12.88□□□□□ -0.35
GTF3C1-209ENST00000568569 TUBGCP4Q9UGJ1 667 aa12.88□□□□□ -0.35
GTF3C1-209ENST00000568569 PCDHGA5Q9Y5G8 931 aa12.88□□□□□ -0.35
GTF3C1-209ENST00000568569 ABLIM1O14639 778 aa12.87□□□□□ -0.35
GTF3C1-209ENST00000568569 MEFVO15553 781 aaPredicted RBP12.87□□□□□ -0.35
GTF3C1-209ENST00000568569 VNN2O95498 520 aa12.87□□□□□ -0.35
GTF3C1-209ENST00000568569 FGF19O95750 216 aa12.87□□□□□ -0.35
GTF3C1-209ENST00000568569 OR4Q2P0C623 313 aa12.87□□□□□ -0.35
GTF3C1-209ENST00000568569 HARSP12081 509 aaKnown RBP12.87□□□□□ -0.35
GTF3C1-209ENST00000568569 CCT6AP40227 531 aaKnown RBP12.87□□□□□ -0.35
GTF3C1-209ENST00000568569 RAP1GAPP47736 663 aa12.87□□□□□ -0.35
GTF3C1-209ENST00000568569 DUSP4Q13115 394 aa12.87□□□□□ -0.35
GTF3C1-209ENST00000568569 SAFBQ15424 915 aaKnown RBP eCLIP12.87□□□□□ -0.35
GTF3C1-209ENST00000568569 CCDC6Q16204 474 aa12.87□□□□□ -0.35
GTF3C1-209ENST00000568569 ECM1Q16610 540 aa12.87□□□□□ -0.35
GTF3C1-209ENST00000568569 TAS1R3Q7RTX0 852 aa12.87□□□□□ -0.35
GTF3C1-209ENST00000568569 USP37Q86T82 979 aa12.87□□□□□ -0.35
GTF3C1-209ENST00000568569 NSUN7Q8NE18 718 aaKnown RBP12.87□□□□□ -0.35
GTF3C1-209ENST00000568569 TTC8Q8TAM2 541 aa12.87□□□□□ -0.35
GTF3C1-209ENST00000568569 ZFYVE19Q96K21 471 aa12.87□□□□□ -0.35
GTF3C1-209ENST00000568569 LRRC3BQ96PB8 259 aa12.87□□□□□ -0.35
GTF3C1-209ENST00000568569 MKNK1Q9BUB5 465 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms