RNA–Protein interactions for RNA: ENST00000568566.5

TSC2-223, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-223ENST00000568566 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.12□□□□□ -0.95
TSC2-223ENST00000568566 KANSL3Q9P2N6 904 aa9.12□□□□□ -0.95
TSC2-223ENST00000568566 ANKFY1Q9P2R3 1169 aa9.12□□□□□ -0.95
TSC2-223ENST00000568566 PARP2Q9UGN5 583 aa9.12□□□□□ -0.95
TSC2-223ENST00000568566 USP25Q9UHP3 1055 aa9.12□□□□□ -0.95
TSC2-223ENST00000568566 SSX2IPQ9Y2D8 614 aa9.12□□□□□ -0.95
TSC2-223ENST00000568566 PATJQ8NI35 1801 aa9.12□□□□□ -0.95
TSC2-223ENST00000568566 CFAP47Q6ZTR5 3102 aa9.11□□□□□ -0.95
TSC2-223ENST00000568566 ARL5CA6NH57 179 aa9.11□□□□□ -0.95
TSC2-223ENST00000568566 PTGESO14684 152 aa9.11□□□□□ -0.95
TSC2-223ENST00000568566 RECQL4O94761 1208 aa9.11□□□□□ -0.95
TSC2-223ENST00000568566 PIGRP01833 764 aa9.11□□□□□ -0.95
TSC2-223ENST00000568566 ITGA4P13612 1032 aa9.11□□□□□ -0.95
TSC2-223ENST00000568566 FSHRP23945 695 aa9.11□□□□□ -0.95
TSC2-223ENST00000568566 ACOT2P49753 483 aa9.11□□□□□ -0.95
TSC2-223ENST00000568566 SCNN1GP51170 649 aa9.11□□□□□ -0.95
TSC2-223ENST00000568566 SMTNP53814 917 aa9.11□□□□□ -0.95
TSC2-223ENST00000568566 GPC5P78333 572 aa9.11□□□□□ -0.95
TSC2-223ENST00000568566 AMPD3Q01432 767 aa9.11□□□□□ -0.95
TSC2-223ENST00000568566 DSG1Q02413 1049 aa9.11□□□□□ -0.95
TSC2-223ENST00000568566 SOX4Q06945 474 aaPredicted RBP9.11□□□□□ -0.95
TSC2-223ENST00000568566 UBXN2BQ14CS0 331 aa9.11□□□□□ -0.95
TSC2-223ENST00000568566 SLC10A6Q3KNW5 377 aa9.11□□□□□ -0.95
TSC2-223ENST00000568566 ZNF568Q3ZCX4 644 aa9.11□□□□□ -0.95
TSC2-223ENST00000568566 NOTUMQ6P988 496 aa9.11□□□□□ -0.95
TSC2-223ENST00000568566 SLC27A1Q6PCB7 646 aa9.11□□□□□ -0.95
TSC2-223ENST00000568566 PARM1Q6UWI2 310 aa9.11□□□□□ -0.95
TSC2-223ENST00000568566 RNF168Q8IYW5 571 aaPredicted RBP9.11□□□□□ -0.95
TSC2-223ENST00000568566 SPATA20Q8TB22 786 aa9.11□□□□□ -0.95
TSC2-223ENST00000568566 FGF14Q92915 247 aa9.11□□□□□ -0.95
TSC2-223ENST00000568566 BICD1Q96G01 975 aa9.11□□□□□ -0.95
TSC2-223ENST00000568566 EEF2KMTQ96G04 330 aa9.11□□□□□ -0.95
TSC2-223ENST00000568566 TIGD1Q96MW7 591 aa9.11□□□□□ -0.95
TSC2-223ENST00000568566 PAAF1Q9BRP4 392 aa9.11□□□□□ -0.95
TSC2-223ENST00000568566 TCHPQ9BT92 498 aa9.11□□□□□ -0.95
TSC2-223ENST00000568566 PRKD2Q9BZL6 878 aa9.11□□□□□ -0.95
TSC2-223ENST00000568566 CLSTN2Q9H4D0 955 aa9.11□□□□□ -0.95
TSC2-223ENST00000568566 ST6GALNAC4Q9H4F1 302 aa9.11□□□□□ -0.95
TSC2-223ENST00000568566 PLEKHA4Q9H4M7 779 aa9.11□□□□□ -0.95
TSC2-223ENST00000568566 MAGEF1Q9HAY2 307 aa9.11□□□□□ -0.95
TSC2-223ENST00000568566 RXFP1Q9HBX9 757 aa9.11□□□□□ -0.95
TSC2-223ENST00000568566 EXOC1Q9NV70 894 aa9.11□□□□□ -0.95
TSC2-223ENST00000568566 ZDHHC7Q9NXF8 308 aa9.11□□□□□ -0.95
TSC2-223ENST00000568566 MTF2Q9Y483 593 aaPredicted RBP9.11□□□□□ -0.95
TSC2-223ENST00000568566 TDRD15B5MCY1 1934 aaKnown RBP9.11□□□□□ -0.95
TSC2-223ENST00000568566 MTCL1Q9Y4B5 1905 aaKnown RBP9.11□□□□□ -0.95
TSC2-223ENST00000568566 CEP295Q9C0D2 2601 aa9.1□□□□□ -0.95
TSC2-223ENST00000568566 A0A0B4J269 797 aa9.1□□□□□ -0.95
TSC2-223ENST00000568566 LACTBL1A8MY62 500 aa9.1□□□□□ -0.95
TSC2-223ENST00000568566 PPP1R3GB7ZBB8 358 aa9.1□□□□□ -0.95
TSC2-223ENST00000568566 TULP1O00294 542 aaPredicted RBP9.1□□□□□ -0.95
TSC2-223ENST00000568566 N4BP3O15049 544 aa9.1□□□□□ -0.95
TSC2-223ENST00000568566 SPTLC1O15269 473 aa9.1□□□□□ -0.95
TSC2-223ENST00000568566 LAMTOR5O43504 91 aa9.1□□□□□ -0.95
TSC2-223ENST00000568566 RHOBTB3O94955 611 aa9.1□□□□□ -0.95
TSC2-223ENST00000568566 EFEMP2O95967 443 aa9.1□□□□□ -0.95
TSC2-223ENST00000568566 ADRB2P07550 413 aa9.1□□□□□ -0.95
TSC2-223ENST00000568566 AXLP30530 894 aa9.1□□□□□ -0.95
TSC2-223ENST00000568566 PRCPP42785 496 aa9.1□□□□□ -0.95
TSC2-223ENST00000568566 CASP4P49662 377 aa9.1□□□□□ -0.95
TSC2-223ENST00000568566 LIG4P49917 911 aa9.1□□□□□ -0.95
TSC2-223ENST00000568566 STARD6P59095 220 aa9.1□□□□□ -0.95
TSC2-223ENST00000568566 NTHL1P78549 312 aa9.1□□□□□ -0.95
TSC2-223ENST00000568566 CSTF1Q05048 431 aaKnown RBP9.1□□□□□ -0.95
TSC2-223ENST00000568566 MCL1Q07820 350 aa9.1□□□□□ -0.95
TSC2-223ENST00000568566 DSC1Q08554 894 aa9.1□□□□□ -0.95
TSC2-223ENST00000568566 STRN3Q13033 797 aa9.1□□□□□ -0.95
TSC2-223ENST00000568566 NAB2Q15742 525 aa9.1□□□□□ -0.95
TSC2-223ENST00000568566 MLF2Q15773 248 aaPredicted RBP9.1□□□□□ -0.95
TSC2-223ENST00000568566 VARS2Q5ST30 1063 aaKnown RBP9.1□□□□□ -0.95
TSC2-223ENST00000568566 MPZL3Q6UWV2 235 aa9.1□□□□□ -0.95
TSC2-223ENST00000568566 GRASPQ7Z6J2 395 aaPredicted RBP9.1□□□□□ -0.95
TSC2-223ENST00000568566 PLEKHO2Q8TD55 490 aa9.1□□□□□ -0.95
TSC2-223ENST00000568566 NOC3LQ8WTT2 800 aaKnown RBP9.1□□□□□ -0.95
TSC2-223ENST00000568566 C18orf25Q96B23 403 aaPredicted RBP9.1□□□□□ -0.95
TSC2-223ENST00000568566 ELMO3Q96BJ8 720 aa9.1□□□□□ -0.95
TSC2-223ENST00000568566 SHDQ96IW2 340 aa9.1□□□□□ -0.95
TSC2-223ENST00000568566 PRIMPOLQ96LW4 560 aa9.1□□□□□ -0.95
TSC2-223ENST00000568566 GBP4Q96PP9 640 aa9.1□□□□□ -0.95
TSC2-223ENST00000568566 ACCSQ96QU6 501 aa9.1□□□□□ -0.95
TSC2-223ENST00000568566 BCO2Q9BYV7 579 aa9.1□□□□□ -0.95
TSC2-223ENST00000568566 GPR62Q9BZJ7 368 aa9.1□□□□□ -0.95
TSC2-223ENST00000568566 GZF1Q9H116 711 aaPredicted RBP9.1□□□□□ -0.95
TSC2-223ENST00000568566 KCTD10Q9H3F6 313 aa9.1□□□□□ -0.95
TSC2-223ENST00000568566 GOLGA2P5Q9HBQ8 144 aa9.1□□□□□ -0.95
TSC2-223ENST00000568566 TMEM63CQ9P1W3 806 aa9.1□□□□□ -0.95
TSC2-223ENST00000568566 SEL1LQ9UBV2 794 aa9.1□□□□□ -0.95
TSC2-223ENST00000568566 SMG5Q9UPR3 1016 aaKnown RBP9.1□□□□□ -0.95
TSC2-223ENST00000568566 KANSL1LA0AUZ9 987 aa9.09□□□□□ -0.95
TSC2-223ENST00000568566 TRIM49BA6NDI0 452 aa9.09□□□□□ -0.95
TSC2-223ENST00000568566 PPEF2O14830 753 aa9.09□□□□□ -0.95
TSC2-223ENST00000568566 HNRNPDLO14979 420 aaKnown RBP9.09□□□□□ -0.95
TSC2-223ENST00000568566 TOM1L1O75674 476 aa9.09□□□□□ -0.95
TSC2-223ENST00000568566 ZMYND10O75800 440 aa9.09□□□□□ -0.95
TSC2-223ENST00000568566 PAPLNO95428 1278 aa9.09□□□□□ -0.95
TSC2-223ENST00000568566 CXCL8P10145 99 aa9.09□□□□□ -0.95
TSC2-223ENST00000568566 CD72P21854 359 aa9.09□□□□□ -0.95
TSC2-223ENST00000568566 GRM5P41594 1212 aa9.09□□□□□ -0.95
TSC2-223ENST00000568566 MATR3P43243 847 aaKnown RBP eCLIP9.09□□□□□ -0.95
TSC2-223ENST00000568566 CYP2J2P51589 502 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms