RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 DAXXQ9UER7 740 aaPredicted RBP16.92■□□□□ 0.3
NME3-211ENST00000568561 SMG5Q9UPR3 1016 aaKnown RBP16.92■□□□□ 0.3
NME3-211ENST00000568561 MRPS17Q9Y2R5 130 aaKnown RBP16.92■□□□□ 0.3
NME3-211ENST00000568561 KIF26AQ9ULI4 1882 aaPredicted RBP16.92■□□□□ 0.3
NME3-211ENST00000568561 PPEF2O14830 753 aa16.91■□□□□ 0.3
NME3-211ENST00000568561 NCAM2O15394 837 aa16.91■□□□□ 0.3
NME3-211ENST00000568561 CLDN3O15551 220 aa16.91■□□□□ 0.3
NME3-211ENST00000568561 PLA2G4BP0C869 781 aa16.91■□□□□ 0.3
NME3-211ENST00000568561 MARCKSP29966 332 aaPredicted RBP16.91■□□□□ 0.3
NME3-211ENST00000568561 RPS9P46781 194 aaKnown RBP16.91■□□□□ 0.3
NME3-211ENST00000568561 CDR1P51861 262 aa16.91■□□□□ 0.3
NME3-211ENST00000568561 SMTNP53814 917 aa16.91■□□□□ 0.3
NME3-211ENST00000568561 SLC12A3P55017 1021 aa16.91■□□□□ 0.3
NME3-211ENST00000568561 ATP2C1P98194 919 aaPredicted RBP16.91■□□□□ 0.3
NME3-211ENST00000568561 YWHAHQ04917 246 aaPredicted RBP16.91■□□□□ 0.3
NME3-211ENST00000568561 MCL1Q07820 350 aa16.91■□□□□ 0.3
NME3-211ENST00000568561 RSPO4Q2I0M5 234 aaPredicted RBP16.91■□□□□ 0.3
NME3-211ENST00000568561 ZPBP2Q6X784 338 aa16.91■□□□□ 0.3
NME3-211ENST00000568561 GPIHBP1Q8IV16 184 aa16.91■□□□□ 0.3
NME3-211ENST00000568561 ZNF687Q8N1G0 1237 aa16.91■□□□□ 0.3
NME3-211ENST00000568561 SYT2Q8N9I0 419 aaPredicted RBP16.91■□□□□ 0.3
NME3-211ENST00000568561 RSPRY1Q96DX4 576 aa16.91■□□□□ 0.3
NME3-211ENST00000568561 NTPCRQ9BSD7 190 aaKnown RBP16.91■□□□□ 0.3
NME3-211ENST00000568561 TIPINQ9BVW5 301 aa16.91■□□□□ 0.3
NME3-211ENST00000568561 SLITRK6Q9H5Y7 841 aa16.91■□□□□ 0.3
NME3-211ENST00000568561 PIAS3Q9Y6X2 628 aa16.91■□□□□ 0.3
NME3-211ENST00000568561 NUP210Q8TEM1 1887 aaPredicted RBP16.9■□□□□ 0.3
NME3-211ENST00000568561 TCHHQ07283 1943 aa16.9■□□□□ 0.3
NME3-211ENST00000568561 TTC26A0AVF1 554 aa16.9■□□□□ 0.3
NME3-211ENST00000568561 M0QZQ0 153 aa16.9■□□□□ 0.3
NME3-211ENST00000568561 MICAL2O94851 1124 aa16.9■□□□□ 0.3
NME3-211ENST00000568561 PSMC3P17980 439 aa16.9■□□□□ 0.3
NME3-211ENST00000568561 PUM1Q14671 1186 aaKnown RBP eCLIP16.9■□□□□ 0.3
NME3-211ENST00000568561 ARSHQ5FYA8 562 aa16.9■□□□□ 0.3
NME3-211ENST00000568561 HYIQ5T013 277 aa16.9■□□□□ 0.3
NME3-211ENST00000568561 STXBP5Q5T5C0 1151 aa16.9■□□□□ 0.3
NME3-211ENST00000568561 MAP4K3Q8IVH8 894 aa16.9■□□□□ 0.3
NME3-211ENST00000568561 LRRC15Q8TF66 581 aa16.9■□□□□ 0.3
NME3-211ENST00000568561 NELL1Q92832 810 aa16.9■□□□□ 0.3
NME3-211ENST00000568561 IRF7Q92985 503 aa16.9■□□□□ 0.3
NME3-211ENST00000568561 CDK5RAP3Q96JB5 506 aa16.9■□□□□ 0.3
NME3-211ENST00000568561 DNAJC25Q9H1X3 360 aa16.9■□□□□ 0.3
NME3-211ENST00000568561 EPC1Q9H2F5 836 aa16.9■□□□□ 0.3
NME3-211ENST00000568561 ZNF334Q9HCZ1 680 aaPredicted RBP16.9■□□□□ 0.3
NME3-211ENST00000568561 SCN1AP35498 2009 aa16.89■□□□□ 0.29
NME3-211ENST00000568561 A0A1W2PRU2 124 aa16.89■□□□□ 0.29
NME3-211ENST00000568561 LACTBL1A8MY62 500 aa16.89■□□□□ 0.29
NME3-211ENST00000568561 LILRB5O75023 590 aa16.89■□□□□ 0.29
NME3-211ENST00000568561 SOAT2O75908 522 aa16.89■□□□□ 0.29
NME3-211ENST00000568561 CLTAP09496 248 aa16.89■□□□□ 0.29
NME3-211ENST00000568561 LRPAP1P30533 357 aa16.89■□□□□ 0.29
NME3-211ENST00000568561 EPHA5P54756 1037 aa16.89■□□□□ 0.29
NME3-211ENST00000568561 PPP2R3AQ06190 1150 aa16.89■□□□□ 0.29
NME3-211ENST00000568561 DUSP4Q13115 394 aa16.89■□□□□ 0.29
NME3-211ENST00000568561 DHX8Q14562 1220 aaKnown RBP16.89■□□□□ 0.29
NME3-211ENST00000568561 ENOX2Q16206 610 aaKnown RBP16.89■□□□□ 0.29
NME3-211ENST00000568561 LPAL2Q16609 132 aa16.89■□□□□ 0.29
NME3-211ENST00000568561 TMEM119Q4V9L6 283 aa16.89■□□□□ 0.29
NME3-211ENST00000568561 RILPL1Q5EBL4 403 aa16.89■□□□□ 0.29
NME3-211ENST00000568561 DSTYKQ6XUX3 929 aa16.89■□□□□ 0.29
NME3-211ENST00000568561 HAUS6Q7Z4H7 955 aa16.89■□□□□ 0.29
NME3-211ENST00000568561 TMC8Q8IU68 726 aa16.89■□□□□ 0.29
NME3-211ENST00000568561 TTC9BQ8N6N2 239 aa16.89■□□□□ 0.29
NME3-211ENST00000568561 FAM3CQ92520 227 aa16.89■□□□□ 0.29
NME3-211ENST00000568561 REEP2Q9BRK0 252 aa16.89■□□□□ 0.29
NME3-211ENST00000568561 CHRDQ9H2X0 955 aa16.89■□□□□ 0.29
NME3-211ENST00000568561 DLL3Q9NYJ7 618 aa16.89■□□□□ 0.29
NME3-211ENST00000568561 SLC27A5Q9Y2P5 690 aa16.89■□□□□ 0.29
NME3-211ENST00000568561 EPG5Q9HCE0 2579 aa16.88■□□□□ 0.29
NME3-211ENST00000568561 TPRP12270 2363 aaKnown RBP16.88■□□□□ 0.29
NME3-211ENST00000568561 HEPACAM2A8MVW5 462 aa16.88■□□□□ 0.29
NME3-211ENST00000568561 MAN2B1O00754 1011 aa16.88■□□□□ 0.29
NME3-211ENST00000568561 ZNF263O14978 683 aa16.88■□□□□ 0.29
NME3-211ENST00000568561 HNRNPDLO14979 420 aaKnown RBP16.88■□□□□ 0.29
NME3-211ENST00000568561 OAZ2O95190 189 aa16.88■□□□□ 0.29
NME3-211ENST00000568561 TDGF1P13385 188 aa16.88■□□□□ 0.29
NME3-211ENST00000568561 SOX9P48436 509 aa16.88■□□□□ 0.29
NME3-211ENST00000568561 LIG4P49917 911 aa16.88■□□□□ 0.29
NME3-211ENST00000568561 NCKAP1LP55160 1127 aa16.88■□□□□ 0.29
NME3-211ENST00000568561 USP37Q86T82 979 aa16.88■□□□□ 0.29
NME3-211ENST00000568561 BEST2Q8NFU1 509 aa16.88■□□□□ 0.29
NME3-211ENST00000568561 DEPDC1BQ8WUY9 529 aa16.88■□□□□ 0.29
NME3-211ENST00000568561 FAM212AQ96EL1 285 aa16.88■□□□□ 0.29
NME3-211ENST00000568561 TMEM209Q96SK2 561 aa16.88■□□□□ 0.29
NME3-211ENST00000568561 LRRC3Q9BY71 257 aa16.88■□□□□ 0.29
NME3-211ENST00000568561 LMAN1LQ9HAT1 526 aa16.88■□□□□ 0.29
NME3-211ENST00000568561 PLEKHA5Q9HAU0 1116 aa16.88■□□□□ 0.29
NME3-211ENST00000568561 UBQLN1Q9UMX0 589 aaKnown RBP16.88■□□□□ 0.29
NME3-211ENST00000568561 SLC38A8A6NNN8 435 aa16.87■□□□□ 0.29
NME3-211ENST00000568561 K7ENM7 598 aa16.87■□□□□ 0.29
NME3-211ENST00000568561 FAM189A1O60320 539 aa16.87■□□□□ 0.29
NME3-211ENST00000568561 CCNE1P24864 410 aa16.87■□□□□ 0.29
NME3-211ENST00000568561 AARSP49588 968 aaKnown RBP eCLIP16.87■□□□□ 0.29
NME3-211ENST00000568561 ZBTB6Q15916 424 aa16.87■□□□□ 0.29
NME3-211ENST00000568561 OVOS1Q6IE37 1185 aa16.87■□□□□ 0.29
NME3-211ENST00000568561 GPBP1Q86WP2 473 aa16.87■□□□□ 0.29
NME3-211ENST00000568561 ATAD1Q8NBU5 361 aa16.87■□□□□ 0.29
NME3-211ENST00000568561 LEMD2Q8NC56 503 aa16.87■□□□□ 0.29
NME3-211ENST00000568561 TTC8Q8TAM2 541 aa16.87■□□□□ 0.29
NME3-211ENST00000568561 LARSQ9P2J5 1176 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms