RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 OXCT2Q9BYC2 517 aaPredicted RBP16.41■□□□□ 0.22
COMMD4-223ENST00000568301 TRPV5Q9NQA5 729 aa16.41■□□□□ 0.22
COMMD4-223ENST00000568301 ANKFY1Q9P2R3 1169 aa16.41■□□□□ 0.22
COMMD4-223ENST00000568301 CDV3Q9UKY7 258 aaKnown RBP16.41■□□□□ 0.22
COMMD4-223ENST00000568301 USP18Q9UMW8 372 aa16.41■□□□□ 0.22
COMMD4-223ENST00000568301 NDRG2Q9UN36 371 aaKnown RBP16.41■□□□□ 0.22
COMMD4-223ENST00000568301 PCDHB8Q9UN66 801 aa16.41■□□□□ 0.22
COMMD4-223ENST00000568301 PRR5-ARHGAP8B1AHC4 643 aa16.4■□□□□ 0.22
COMMD4-223ENST00000568301 H0YCG3 227 aa16.4■□□□□ 0.22
COMMD4-223ENST00000568301 M0QZQ0 153 aa16.4■□□□□ 0.22
COMMD4-223ENST00000568301 MAN2B1O00754 1011 aa16.4■□□□□ 0.22
COMMD4-223ENST00000568301 CLTAP09496 248 aa16.4■□□□□ 0.22
COMMD4-223ENST00000568301 TDGF1P13385 188 aa16.4■□□□□ 0.22
COMMD4-223ENST00000568301 CCR2P41597 374 aa16.4■□□□□ 0.22
COMMD4-223ENST00000568301 EPHA5P54756 1037 aa16.4■□□□□ 0.22
COMMD4-223ENST00000568301 SLC12A3P55017 1021 aa16.4■□□□□ 0.22
COMMD4-223ENST00000568301 ARHGAP8P85298 464 aa16.4■□□□□ 0.22
COMMD4-223ENST00000568301 LMNB2Q03252 620 aa16.4■□□□□ 0.22
COMMD4-223ENST00000568301 GRM2Q14416 872 aa16.4■□□□□ 0.22
COMMD4-223ENST00000568301 ZRSR1Q15695 479 aaKnown RBP16.4■□□□□ 0.22
COMMD4-223ENST00000568301 ZBTB6Q15916 424 aa16.4■□□□□ 0.22
COMMD4-223ENST00000568301 MAMSTRQ6ZN01 415 aa16.4■□□□□ 0.22
COMMD4-223ENST00000568301 BEST2Q8NFU1 509 aa16.4■□□□□ 0.22
COMMD4-223ENST00000568301 SMARCD2Q92925 531 aa16.4■□□□□ 0.22
COMMD4-223ENST00000568301 IRF7Q92985 503 aa16.4■□□□□ 0.22
COMMD4-223ENST00000568301 PNMA5Q96PV4 448 aa16.4■□□□□ 0.22
COMMD4-223ENST00000568301 TSPAN18Q96SJ8 248 aa16.4■□□□□ 0.22
COMMD4-223ENST00000568301 BRD9Q9H8M2 597 aa16.4■□□□□ 0.22
COMMD4-223ENST00000568301 TRPV4Q9HBA0 871 aa16.4■□□□□ 0.22
COMMD4-223ENST00000568301 CEP72Q9P209 647 aa16.4■□□□□ 0.22
COMMD4-223ENST00000568301 LARSQ9P2J5 1176 aaKnown RBP16.4■□□□□ 0.22
COMMD4-223ENST00000568301 TTC26A0AVF1 554 aa16.39■□□□□ 0.21
COMMD4-223ENST00000568301 CYP3A5P20815 502 aa16.39■□□□□ 0.21
COMMD4-223ENST00000568301 SCP2P22307 547 aa16.39■□□□□ 0.21
COMMD4-223ENST00000568301 LRPAP1P30533 357 aa16.39■□□□□ 0.21
COMMD4-223ENST00000568301 RAD51AP2Q09MP3 1159 aa16.39■□□□□ 0.21
COMMD4-223ENST00000568301 KYAT1Q16773 422 aa16.39■□□□□ 0.21
COMMD4-223ENST00000568301 SEZ6Q53EL9 994 aa16.39■□□□□ 0.21
COMMD4-223ENST00000568301 ARL6IP4Q66PJ3 421 aaKnown RBP16.39■□□□□ 0.21
COMMD4-223ENST00000568301 RNF19BQ6ZMZ0 732 aa16.39■□□□□ 0.21
COMMD4-223ENST00000568301 MAP4K3Q8IVH8 894 aa16.39■□□□□ 0.21
COMMD4-223ENST00000568301 HS6ST3Q8IZP7 471 aa16.39■□□□□ 0.21
COMMD4-223ENST00000568301 FAM126AQ9BYI3 521 aaPredicted RBP16.39■□□□□ 0.21
COMMD4-223ENST00000568301 GPR88Q9GZN0 384 aa16.39■□□□□ 0.21
COMMD4-223ENST00000568301 TUBGCP4Q9UGJ1 667 aa16.39■□□□□ 0.21
COMMD4-223ENST00000568301 CHD8Q9HCK8 2581 aa16.38■□□□□ 0.21
COMMD4-223ENST00000568301 SLC26A4O43511 780 aa16.38■□□□□ 0.21
COMMD4-223ENST00000568301 MOSPD3O75425 235 aa16.38■□□□□ 0.21
COMMD4-223ENST00000568301 PLA2G4BP0C869 781 aa16.38■□□□□ 0.21
COMMD4-223ENST00000568301 CXCL8P10145 99 aa16.38■□□□□ 0.21
COMMD4-223ENST00000568301 CPB1P15086 417 aa16.38■□□□□ 0.21
COMMD4-223ENST00000568301 PSMC3P17980 439 aa16.38■□□□□ 0.21
COMMD4-223ENST00000568301 AARSP49588 968 aaKnown RBP eCLIP16.38■□□□□ 0.21
COMMD4-223ENST00000568301 YWHAHQ04917 246 aaPredicted RBP16.38■□□□□ 0.21
COMMD4-223ENST00000568301 TWF1Q12792 350 aa16.38■□□□□ 0.21
COMMD4-223ENST00000568301 LPAL2Q16609 132 aa16.38■□□□□ 0.21
COMMD4-223ENST00000568301 MCTP1Q6DN14 999 aa16.38■□□□□ 0.21
COMMD4-223ENST00000568301 HAUS6Q7Z4H7 955 aa16.38■□□□□ 0.21
COMMD4-223ENST00000568301 DEPDC1BQ8WUY9 529 aa16.38■□□□□ 0.21
COMMD4-223ENST00000568301 E2F7Q96AV8 911 aa16.38■□□□□ 0.21
COMMD4-223ENST00000568301 CDK5RAP3Q96JB5 506 aa16.38■□□□□ 0.21
COMMD4-223ENST00000568301 ZSWIM3Q96MP5 696 aa16.38■□□□□ 0.21
COMMD4-223ENST00000568301 RTKNQ9BST9 563 aa16.38■□□□□ 0.21
COMMD4-223ENST00000568301 HAPLN2Q9GZV7 340 aa16.38■□□□□ 0.21
COMMD4-223ENST00000568301 CHRDQ9H2X0 955 aa16.38■□□□□ 0.21
COMMD4-223ENST00000568301 ZNF334Q9HCZ1 680 aaPredicted RBP16.38■□□□□ 0.21
COMMD4-223ENST00000568301 ASAH2Q9NR71 780 aa16.38■□□□□ 0.21
COMMD4-223ENST00000568301 UBQLN1Q9UMX0 589 aaKnown RBP16.38■□□□□ 0.21
COMMD4-223ENST00000568301 TICRRQ7Z2Z1 1910 aa16.37■□□□□ 0.21
COMMD4-223ENST00000568301 COL4A2P08572 1712 aa16.37■□□□□ 0.21
COMMD4-223ENST00000568301 VWA3AA6NCI4 1184 aa16.37■□□□□ 0.21
COMMD4-223ENST00000568301 ADRB2P07550 413 aa16.37■□□□□ 0.21
COMMD4-223ENST00000568301 MYL4P12829 197 aa16.37■□□□□ 0.21
COMMD4-223ENST00000568301 MATR3P43243 847 aaKnown RBP eCLIP16.37■□□□□ 0.21
COMMD4-223ENST00000568301 NCKAP1LP55160 1127 aa16.37■□□□□ 0.21
COMMD4-223ENST00000568301 MLLT6P55198 1093 aaPredicted RBP16.37■□□□□ 0.21
COMMD4-223ENST00000568301 SPEM2Q0P670 501 aa16.37■□□□□ 0.21
COMMD4-223ENST00000568301 ARSHQ5FYA8 562 aa16.37■□□□□ 0.21
COMMD4-223ENST00000568301 VITQ6UXI7 678 aa16.37■□□□□ 0.21
COMMD4-223ENST00000568301 MFSD6LQ8IWD5 586 aa16.37■□□□□ 0.21
COMMD4-223ENST00000568301 AK8Q96MA6 479 aa16.37■□□□□ 0.21
COMMD4-223ENST00000568301 PLIN2Q99541 437 aa16.37■□□□□ 0.21
COMMD4-223ENST00000568301 IER2Q9BTL4 223 aa16.37■□□□□ 0.21
COMMD4-223ENST00000568301 LMAN1LQ9HAT1 526 aa16.37■□□□□ 0.21
COMMD4-223ENST00000568301 GMEB2Q9UKD1 530 aa16.37■□□□□ 0.21
COMMD4-223ENST00000568301 ODF2LQ9ULJ1 636 aa16.37■□□□□ 0.21
COMMD4-223ENST00000568301 OR6C75A6NL08 312 aa16.36■□□□□ 0.21
COMMD4-223ENST00000568301 XPOTO43592 962 aaKnown RBP16.36■□□□□ 0.21
COMMD4-223ENST00000568301 PAX3P23760 479 aa16.36■□□□□ 0.21
COMMD4-223ENST00000568301 GDI1P31150 447 aa16.36■□□□□ 0.21
COMMD4-223ENST00000568301 NRLP54845 237 aa16.36■□□□□ 0.21
COMMD4-223ENST00000568301 PPP2R3AQ06190 1150 aa16.36■□□□□ 0.21
COMMD4-223ENST00000568301 SPAG1Q07617 926 aa16.36■□□□□ 0.21
COMMD4-223ENST00000568301 GPR17Q13304 367 aa16.36■□□□□ 0.21
COMMD4-223ENST00000568301 PLD1Q13393 1074 aa16.36■□□□□ 0.21
COMMD4-223ENST00000568301 TMEM119Q4V9L6 283 aa16.36■□□□□ 0.21
COMMD4-223ENST00000568301 USP37Q86T82 979 aa16.36■□□□□ 0.21
COMMD4-223ENST00000568301 ZSCAN18Q8TBC5 510 aaPredicted RBP16.36■□□□□ 0.21
COMMD4-223ENST00000568301 FAM3CQ92520 227 aa16.36■□□□□ 0.21
COMMD4-223ENST00000568301 KIF12Q96FN5 646 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms