RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 CYP4F22Q6NT55 531 aa16.61■□□□□ 0.25
COMMD4-215ENST00000566843 MCOLN2Q8IZK6 566 aa16.61■□□□□ 0.25
COMMD4-215ENST00000566843 ZNF75CPQ92670 426 aaPredicted RBP16.61■□□□□ 0.25
COMMD4-215ENST00000566843 MIPEPQ99797 713 aa16.61■□□□□ 0.25
COMMD4-215ENST00000566843 NMRK1Q9NWW6 199 aa16.61■□□□□ 0.25
COMMD4-215ENST00000566843 H0Y3Z8 333 aa16.61■□□□□ 0.25
COMMD4-215ENST00000566843 MAP3K13O43283 966 aa16.61■□□□□ 0.25
COMMD4-215ENST00000566843 BBOX1O75936 387 aa16.61■□□□□ 0.25
COMMD4-215ENST00000566843 NDUFB10O96000 172 aa16.61■□□□□ 0.25
COMMD4-215ENST00000566843 ADRB2P07550 413 aa16.61■□□□□ 0.25
COMMD4-215ENST00000566843 MYBL1P10243 752 aa16.61■□□□□ 0.25
COMMD4-215ENST00000566843 BMP3P12645 472 aa16.61■□□□□ 0.25
COMMD4-215ENST00000566843 UNGP13051 313 aaPredicted RBP16.61■□□□□ 0.25
COMMD4-215ENST00000566843 CERKLQ49MI3 558 aaPredicted RBP16.61■□□□□ 0.25
COMMD4-215ENST00000566843 OR52E8Q6IFG1 317 aa16.61■□□□□ 0.25
COMMD4-215ENST00000566843 HHIPL2Q6UWX4 724 aa16.61■□□□□ 0.25
COMMD4-215ENST00000566843 CLNKQ7Z7G1 428 aa16.61■□□□□ 0.25
COMMD4-215ENST00000566843 RBM17Q96I25 401 aaKnown RBP16.61■□□□□ 0.25
COMMD4-215ENST00000566843 LXNQ9BS40 222 aa16.61■□□□□ 0.25
COMMD4-215ENST00000566843 SAYSD1Q9NPB0 183 aa16.61■□□□□ 0.25
COMMD4-215ENST00000566843 LARSQ9P2J5 1176 aaKnown RBP16.61■□□□□ 0.25
COMMD4-215ENST00000566843 LRCH1Q9Y2L9 728 aa16.61■□□□□ 0.25
COMMD4-215ENST00000566843 DNALI1O14645 258 aaPredicted RBP16.6■□□□□ 0.25
COMMD4-215ENST00000566843 PSTPIP1O43586 416 aa16.6■□□□□ 0.25
COMMD4-215ENST00000566843 FDX1P10109 184 aa16.6■□□□□ 0.25
COMMD4-215ENST00000566843 NFIAQ12857 509 aa16.6■□□□□ 0.25
COMMD4-215ENST00000566843 MUM1Q2TAK8 710 aa16.6■□□□□ 0.25
COMMD4-215ENST00000566843 KHDC1Q4VXA5 237 aaKnown RBP16.6■□□□□ 0.25
COMMD4-215ENST00000566843 PCNX4Q63HM2 1172 aa16.6■□□□□ 0.25
COMMD4-215ENST00000566843 APOBEC3HQ6NTF7 200 aaKnown RBP16.6■□□□□ 0.25
COMMD4-215ENST00000566843 PADI6Q6TGC4 694 aa16.6■□□□□ 0.25
COMMD4-215ENST00000566843 ZFPM1Q8IX07 1006 aa16.6■□□□□ 0.25
COMMD4-215ENST00000566843 TUBB6Q9BUF5 446 aa16.6■□□□□ 0.25
COMMD4-215ENST00000566843 CADM1Q9BY67 442 aaKnown RBP16.6■□□□□ 0.25
COMMD4-215ENST00000566843 VCXQ9H320 206 aa16.6■□□□□ 0.25
COMMD4-215ENST00000566843 ST6GALNAC4Q9H4F1 302 aa16.6■□□□□ 0.25
COMMD4-215ENST00000566843 KCNQ5Q9NR82 932 aa16.6■□□□□ 0.25
COMMD4-215ENST00000566843 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.6■□□□□ 0.25
COMMD4-215ENST00000566843 SLC24A2Q9UI40 661 aa16.6■□□□□ 0.25
COMMD4-215ENST00000566843 GOLGB1Q14789 3259 aaKnown RBP16.6■□□□□ 0.25
COMMD4-215ENST00000566843 ADAMTSL1Q8N6G6 1762 aa16.6■□□□□ 0.25
COMMD4-215ENST00000566843 KLRG2A4D1S0 409 aaPredicted RBP16.59■□□□□ 0.25
COMMD4-215ENST00000566843 ZBED4O75132 1171 aa16.59■□□□□ 0.25
COMMD4-215ENST00000566843 PROSCO94903 275 aa16.59■□□□□ 0.25
COMMD4-215ENST00000566843 ZWINTO95229 277 aa16.59■□□□□ 0.25
COMMD4-215ENST00000566843 FGFR1P11362 822 aa16.59■□□□□ 0.25
COMMD4-215ENST00000566843 P3H1Q32P28 736 aa16.59■□□□□ 0.25
COMMD4-215ENST00000566843 HHATQ5VTY9 493 aa16.59■□□□□ 0.25
COMMD4-215ENST00000566843 RFWD3Q6PCD5 774 aa16.59■□□□□ 0.25
COMMD4-215ENST00000566843 KATNAL2Q8IYT4 538 aa16.59■□□□□ 0.25
COMMD4-215ENST00000566843 TRIM11Q96F44 468 aa16.59■□□□□ 0.25
COMMD4-215ENST00000566843 OSBPL8Q9BZF1 889 aa16.59■□□□□ 0.25
COMMD4-215ENST00000566843 COA1Q9GZY4 146 aa16.59■□□□□ 0.25
COMMD4-215ENST00000566843 KANSL3Q9P2N6 904 aa16.59■□□□□ 0.25
COMMD4-215ENST00000566843 KRT15P19012 456 aa16.59■□□□□ 0.25
COMMD4-215ENST00000566843 CA4P22748 312 aa16.59■□□□□ 0.25
COMMD4-215ENST00000566843 GTF2BQ00403 316 aa16.59■□□□□ 0.25
COMMD4-215ENST00000566843 GNPTABQ3T906 1256 aa16.59■□□□□ 0.25
COMMD4-215ENST00000566843 ZC3H12AQ5D1E8 599 aaKnown RBP16.59■□□□□ 0.25
COMMD4-215ENST00000566843 KRT39Q6A163 491 aa16.59■□□□□ 0.25
COMMD4-215ENST00000566843 C4orf33Q8N1A6 199 aa16.59■□□□□ 0.25
COMMD4-215ENST00000566843 PTCD3Q96EY7 689 aaKnown RBP16.59■□□□□ 0.25
COMMD4-215ENST00000566843 NT5C1BQ96P26 610 aa16.59■□□□□ 0.25
COMMD4-215ENST00000566843 HEMGNQ9BXL5 484 aa16.59■□□□□ 0.25
COMMD4-215ENST00000566843 CPSF2Q9P2I0 782 aaKnown RBP16.59■□□□□ 0.25
COMMD4-215ENST00000566843 WDR35Q9P2L0 1181 aa16.59■□□□□ 0.25
COMMD4-215ENST00000566843 NUMBLQ9Y6R0 609 aa16.59■□□□□ 0.25
COMMD4-215ENST00000566843 UMODL1Q5DID0 1318 aa16.59■□□□□ 0.25
COMMD4-215ENST00000566843 LRRC37AA6NMS7 1700 aa16.59■□□□□ 0.25
COMMD4-215ENST00000566843 POC1B-GALNT4F8VUJ3 575 aa16.58■□□□□ 0.25
COMMD4-215ENST00000566843 CCDC22O60826 627 aa16.58■□□□□ 0.25
COMMD4-215ENST00000566843 PLS3P13797 630 aa16.58■□□□□ 0.25
COMMD4-215ENST00000566843 PLEKHG4Q58EX7 1191 aa16.58■□□□□ 0.25
COMMD4-215ENST00000566843 FYB2Q5VWT5 728 aa16.58■□□□□ 0.25
COMMD4-215ENST00000566843 TATDN1Q6P1N9 297 aa16.58■□□□□ 0.25
COMMD4-215ENST00000566843 MTHFD1LQ6UB35 978 aa16.58■□□□□ 0.25
COMMD4-215ENST00000566843 TMEM179Q6ZVK1 233 aa16.58■□□□□ 0.25
COMMD4-215ENST00000566843 MTDHQ86UE4 582 aaKnown RBP16.58■□□□□ 0.25
COMMD4-215ENST00000566843 OGFOD1Q8N543 542 aa16.58■□□□□ 0.25
COMMD4-215ENST00000566843 BTBD10Q9BSF8 475 aa16.58■□□□□ 0.25
COMMD4-215ENST00000566843 TEKT3Q9BXF9 490 aa16.58■□□□□ 0.25
COMMD4-215ENST00000566843 TMEM8AQ9HCN3 771 aa16.58■□□□□ 0.25
COMMD4-215ENST00000566843 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.58■□□□□ 0.25
COMMD4-215ENST00000566843 C2CD2Q9Y426 696 aa16.58■□□□□ 0.25
COMMD4-215ENST00000566843 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.58■□□□□ 0.25
COMMD4-215ENST00000566843 ALOX15BO15296 676 aa16.58■□□□□ 0.24
COMMD4-215ENST00000566843 AP1G2O75843 785 aa16.58■□□□□ 0.24
COMMD4-215ENST00000566843 CEP55Q53EZ4 464 aa16.58■□□□□ 0.24
COMMD4-215ENST00000566843 RHOT1Q8IXI2 618 aa16.58■□□□□ 0.24
COMMD4-215ENST00000566843 ZNF276Q8N554 614 aa16.58■□□□□ 0.24
COMMD4-215ENST00000566843 EXD1Q8NHP7 514 aa16.58■□□□□ 0.24
COMMD4-215ENST00000566843 TRAPPC9Q96Q05 1148 aa16.58■□□□□ 0.24
COMMD4-215ENST00000566843 DLGAP2Q9P1A6 1054 aa16.58■□□□□ 0.24
COMMD4-215ENST00000566843 MYPNQ86TC9 1320 aa16.57■□□□□ 0.24
COMMD4-215ENST00000566843 FAM196BA6NMK8 535 aa16.57■□□□□ 0.24
COMMD4-215ENST00000566843 GSTA2P09210 222 aa16.57■□□□□ 0.24
COMMD4-215ENST00000566843 ARP10275 920 aa16.57■□□□□ 0.24
COMMD4-215ENST00000566843 HOXA10P31260 410 aaPredicted RBP16.57■□□□□ 0.24
COMMD4-215ENST00000566843 RFC5P40937 340 aa16.57■□□□□ 0.24
COMMD4-215ENST00000566843 IKQ13123 557 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms