RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 WT1P19544 449 aaPredicted RBP5.72□□□□□ -1.49
CHD9-212ENST00000564641 ANXA11P50995 505 aaKnown RBP5.72□□□□□ -1.49
CHD9-212ENST00000564641 POU6F2P78424 691 aaPredicted RBP5.72□□□□□ -1.49
CHD9-212ENST00000564641 TAP2Q03519 686 aa5.72□□□□□ -1.49
CHD9-212ENST00000564641 TARDBPQ13148 414 aaKnown RBP eCLIP5.72□□□□□ -1.49
CHD9-212ENST00000564641 DYRK1AQ13627 763 aa5.72□□□□□ -1.49
CHD9-212ENST00000564641 HLXQ14774 488 aaPredicted RBP5.72□□□□□ -1.49
CHD9-212ENST00000564641 ACAP2Q15057 778 aa5.72□□□□□ -1.49
CHD9-212ENST00000564641 PTPRRQ15256 657 aa5.72□□□□□ -1.49
CHD9-212ENST00000564641 AKNAD1Q5T1N1 836 aa5.72□□□□□ -1.49
CHD9-212ENST00000564641 GADL1Q6ZQY3 521 aa5.72□□□□□ -1.49
CHD9-212ENST00000564641 ZNF365Q70YC5 407 aa5.72□□□□□ -1.49
CHD9-212ENST00000564641 DDX42Q86XP3 938 aaKnown RBP eCLIP5.72□□□□□ -1.49
CHD9-212ENST00000564641 JADE3Q92613 823 aa5.72□□□□□ -1.49
CHD9-212ENST00000564641 FAXDC2Q96IV6 333 aa5.72□□□□□ -1.49
CHD9-212ENST00000564641 INO80BQ9C086 356 aaPredicted RBP5.72□□□□□ -1.49
CHD9-212ENST00000564641 KMT5AQ9NQR1 393 aa5.72□□□□□ -1.49
CHD9-212ENST00000564641 ENTPD2Q9Y5L3 495 aa5.72□□□□□ -1.49
CHD9-212ENST00000564641 CCDC195A0A1B0GUA6 201 aa5.71□□□□□ -1.5
CHD9-212ENST00000564641 MGST3O14880 152 aa5.71□□□□□ -1.5
CHD9-212ENST00000564641 C1QL1O75973 258 aa5.71□□□□□ -1.5
CHD9-212ENST00000564641 MATN4O95460 622 aa5.71□□□□□ -1.5
CHD9-212ENST00000564641 SLC6A4P31645 630 aa5.71□□□□□ -1.5
CHD9-212ENST00000564641 GRIA3P42263 894 aa5.71□□□□□ -1.5
CHD9-212ENST00000564641 PREPLQ4J6C6 727 aaPredicted RBP5.71□□□□□ -1.5
CHD9-212ENST00000564641 SYDE2Q5VT97 1194 aa5.71□□□□□ -1.5
CHD9-212ENST00000564641 MICALCLQ6ZW33 695 aa5.71□□□□□ -1.5
CHD9-212ENST00000564641 CBARPQ8N350 705 aaPredicted RBP5.71□□□□□ -1.5
CHD9-212ENST00000564641 SNX19Q92543 992 aa5.71□□□□□ -1.5
CHD9-212ENST00000564641 TMEM125Q96AQ2 219 aa5.71□□□□□ -1.5
CHD9-212ENST00000564641 FBXL20Q96IG2 436 aa5.71□□□□□ -1.5
CHD9-212ENST00000564641 KLK15Q9H2R5 256 aa5.71□□□□□ -1.5
CHD9-212ENST00000564641 ARPP21Q9UBL0 812 aaPredicted RBP5.71□□□□□ -1.5
CHD9-212ENST00000564641 TUBD1Q9UJT1 453 aa5.71□□□□□ -1.5
CHD9-212ENST00000564641 CDYLQ9Y232 598 aa5.71□□□□□ -1.5
CHD9-212ENST00000564641 FRMD4BQ9Y2L6 1034 aa5.71□□□□□ -1.5
CHD9-212ENST00000564641 IPPQ9Y573 584 aa5.71□□□□□ -1.5
CHD9-212ENST00000564641 PCDHA13Q9Y5I0 950 aa5.71□□□□□ -1.5
CHD9-212ENST00000564641 HTRA2O43464 458 aaPredicted RBP5.7□□□□□ -1.5
CHD9-212ENST00000564641 ITIH3Q06033 890 aa5.7□□□□□ -1.5
CHD9-212ENST00000564641 RNF187Q5TA31 235 aaPredicted RBP5.7□□□□□ -1.5
CHD9-212ENST00000564641 PTF1AQ7RTS3 328 aa5.7□□□□□ -1.5
CHD9-212ENST00000564641 TTC7BQ86TV6 843 aa5.7□□□□□ -1.5
CHD9-212ENST00000564641 PDSS2Q86YH6 399 aa5.7□□□□□ -1.5
CHD9-212ENST00000564641 MRGPRX4Q96LA9 322 aa5.7□□□□□ -1.5
CHD9-212ENST00000564641 TLR10Q9BXR5 811 aa5.7□□□□□ -1.5
CHD9-212ENST00000564641 FAM126AQ9BYI3 521 aaPredicted RBP5.7□□□□□ -1.5
CHD9-212ENST00000564641 GNL3LQ9NVN8 582 aaKnown RBP5.7□□□□□ -1.5
CHD9-212ENST00000564641 SIDT1Q9NXL6 827 aaKnown RBP5.7□□□□□ -1.5
CHD9-212ENST00000564641 CTTNBP2NLQ9P2B4 639 aa5.7□□□□□ -1.5
CHD9-212ENST00000564641 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.7□□□□□ -1.5
CHD9-212ENST00000564641 CFAP20Q9Y6A4 193 aaKnown RBP5.7□□□□□ -1.5
CHD9-212ENST00000564641 ZCCHC6Q5VYS8 1495 aaKnown RBP5.7□□□□□ -1.5
CHD9-212ENST00000564641 SHTN1A0MZ66 631 aa5.69□□□□□ -1.5
CHD9-212ENST00000564641 RBMXL2O75526 392 aaKnown RBP5.69□□□□□ -1.5
CHD9-212ENST00000564641 CD1AP06126 327 aa5.69□□□□□ -1.5
CHD9-212ENST00000564641 GPD1P21695 349 aa5.69□□□□□ -1.5
CHD9-212ENST00000564641 C5AR1P21730 350 aa5.69□□□□□ -1.5
CHD9-212ENST00000564641 GATA3P23771 443 aa5.69□□□□□ -1.5
CHD9-212ENST00000564641 IARSP41252 1262 aaKnown RBP5.69□□□□□ -1.5
CHD9-212ENST00000564641 NXPH1P58417 271 aa5.69□□□□□ -1.5
CHD9-212ENST00000564641 KIAA1614Q5VZ46 1190 aa5.69□□□□□ -1.5
CHD9-212ENST00000564641 CFAP52Q8N1V2 620 aa5.69□□□□□ -1.5
CHD9-212ENST00000564641 SARAFQ96BY9 339 aa5.69□□□□□ -1.5
CHD9-212ENST00000564641 CLPTM1LQ96KA5 538 aa5.69□□□□□ -1.5
CHD9-212ENST00000564641 KLHL32Q96NJ5 620 aa5.69□□□□□ -1.5
CHD9-212ENST00000564641 RLIMQ9NVW2 624 aa5.69□□□□□ -1.5
CHD9-212ENST00000564641 BICRAQ9NZM4 1560 aa5.68□□□□□ -1.5
CHD9-212ENST00000564641 LRRC3CA6NJW4 275 aa5.68□□□□□ -1.5
CHD9-212ENST00000564641 GCOM1H8Y6P7 765 aaPredicted RBP5.68□□□□□ -1.5
CHD9-212ENST00000564641 TOR1BO14657 336 aa5.68□□□□□ -1.5
CHD9-212ENST00000564641 XPOTO43592 962 aaKnown RBP5.68□□□□□ -1.5
CHD9-212ENST00000564641 SUN1O94901 812 aa5.68□□□□□ -1.5
CHD9-212ENST00000564641 SBK3P0C264 359 aa5.68□□□□□ -1.5
CHD9-212ENST00000564641 CYP2C19P33261 490 aa5.68□□□□□ -1.5
CHD9-212ENST00000564641 MAPK10P53779 464 aa5.68□□□□□ -1.5
CHD9-212ENST00000564641 ATXN1P54253 815 aaKnown RBP5.68□□□□□ -1.5
CHD9-212ENST00000564641 ZNF280AP59817 542 aaPredicted RBP5.68□□□□□ -1.5
CHD9-212ENST00000564641 TLE1Q04724 770 aa5.68□□□□□ -1.5
CHD9-212ENST00000564641 HNRNPA0Q13151 305 aaKnown RBP5.68□□□□□ -1.5
CHD9-212ENST00000564641 SRRM1Q8IYB3 904 aaKnown RBP5.68□□□□□ -1.5
CHD9-212ENST00000564641 ADGRG5Q8IZF4 528 aa5.68□□□□□ -1.5
CHD9-212ENST00000564641 TOR1AIP2Q8NFQ8 470 aa5.68□□□□□ -1.5
CHD9-212ENST00000564641 SMOQ99835 787 aa5.68□□□□□ -1.5
CHD9-212ENST00000564641 IMPG2Q9BZV3 1241 aa5.68□□□□□ -1.5
CHD9-212ENST00000564641 LIMCH1Q9UPQ0 1083 aa5.68□□□□□ -1.5
CHD9-212ENST00000564641 SPATA31A3Q5VYP0 1347 aa5.68□□□□□ -1.5
CHD9-212ENST00000564641 CCDC154A6NI56 674 aa5.67□□□□□ -1.5
CHD9-212ENST00000564641 SOAT2O75908 522 aa5.67□□□□□ -1.5
CHD9-212ENST00000564641 CHEK2O96017 543 aa5.67□□□□□ -1.5
CHD9-212ENST00000564641 MT-CO1P00395 513 aa5.67□□□□□ -1.5
CHD9-212ENST00000564641 GNAI3P08754 354 aa5.67□□□□□ -1.5
CHD9-212ENST00000564641 MYBL2P10244 700 aa5.67□□□□□ -1.5
CHD9-212ENST00000564641 ADKP55263 362 aaKnown RBP5.67□□□□□ -1.5
CHD9-212ENST00000564641 GNAI1P63096 354 aa5.67□□□□□ -1.5
CHD9-212ENST00000564641 KIF23Q02241 960 aaPredicted RBP5.67□□□□□ -1.5
CHD9-212ENST00000564641 FOXF2Q12947 444 aa5.67□□□□□ -1.5
CHD9-212ENST00000564641 CD300EQ496F6 205 aaPredicted RBP5.67□□□□□ -1.5
CHD9-212ENST00000564641 TMPRSS9Q7Z410 1059 aa5.67□□□□□ -1.5
CHD9-212ENST00000564641 PEG10Q86TG7 708 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms