RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 PATE3B3GLJ2 98 aa8.53□□□□□ -1.04
HERPUD1-206ENST00000563343 TBX3O15119 743 aa8.53□□□□□ -1.04
HERPUD1-206ENST00000563343 MEFVO15553 781 aaPredicted RBP8.53□□□□□ -1.04
HERPUD1-206ENST00000563343 VNN2O95498 520 aa8.53□□□□□ -1.04
HERPUD1-206ENST00000563343 EDN1P05305 212 aa8.53□□□□□ -1.04
HERPUD1-206ENST00000563343 MYL4P12829 197 aa8.53□□□□□ -1.04
HERPUD1-206ENST00000563343 ELF1P32519 619 aa8.53□□□□□ -1.04
HERPUD1-206ENST00000563343 FGD1P98174 961 aa8.53□□□□□ -1.04
HERPUD1-206ENST00000563343 TNK2Q07912 1038 aa8.53□□□□□ -1.04
HERPUD1-206ENST00000563343 TWF1Q12792 350 aa8.53□□□□□ -1.04
HERPUD1-206ENST00000563343 TFDP1Q14186 410 aa8.53□□□□□ -1.04
HERPUD1-206ENST00000563343 NPY5RQ15761 445 aa8.53□□□□□ -1.04
HERPUD1-206ENST00000563343 FAM187BQ17R55 369 aa8.53□□□□□ -1.04
HERPUD1-206ENST00000563343 ARHGAP29Q52LW3 1261 aa8.53□□□□□ -1.04
HERPUD1-206ENST00000563343 XKR9Q5GH70 373 aa8.53□□□□□ -1.04
HERPUD1-206ENST00000563343 TMEM196Q5HYL7 178 aa8.53□□□□□ -1.04
HERPUD1-206ENST00000563343 CYP4A22Q5TCH4 519 aa8.53□□□□□ -1.04
HERPUD1-206ENST00000563343 PMS2CLQ68D20 193 aa8.53□□□□□ -1.04
HERPUD1-206ENST00000563343 FSTL4Q6MZW2 842 aa8.53□□□□□ -1.04
HERPUD1-206ENST00000563343 DHX32Q7L7V1 743 aaKnown RBP8.53□□□□□ -1.04
HERPUD1-206ENST00000563343 GPIHBP1Q8IV16 184 aa8.53□□□□□ -1.04
HERPUD1-206ENST00000563343 LEMD2Q8NC56 503 aa8.53□□□□□ -1.04
HERPUD1-206ENST00000563343 GPR88Q9GZN0 384 aa8.53□□□□□ -1.04
HERPUD1-206ENST00000563343 FZD8Q9H461 694 aa8.53□□□□□ -1.04
HERPUD1-206ENST00000563343 KCNMB3Q9NPA1 279 aa8.53□□□□□ -1.04
HERPUD1-206ENST00000563343 FBXL5Q9UKA1 691 aa8.53□□□□□ -1.04
HERPUD1-206ENST00000563343 CFAP46Q8IYW2 2715 aa8.53□□□□□ -1.04
HERPUD1-206ENST00000563343 ACACAQ13085 2346 aa8.53□□□□□ -1.04
HERPUD1-206ENST00000563343 ANAPC1Q9H1A4 1944 aa8.52□□□□□ -1.04
HERPUD1-206ENST00000563343 SPAARA0A1B0GVQ0 90 aa8.52□□□□□ -1.05
HERPUD1-206ENST00000563343 A0A1W2PRU2 124 aa8.52□□□□□ -1.05
HERPUD1-206ENST00000563343 RHOBTB1O94844 696 aa8.52□□□□□ -1.05
HERPUD1-206ENST00000563343 IRX4P78413 519 aa8.52□□□□□ -1.05
HERPUD1-206ENST00000563343 SOX4Q06945 474 aaPredicted RBP8.52□□□□□ -1.05
HERPUD1-206ENST00000563343 AAMPQ13685 434 aa8.52□□□□□ -1.05
HERPUD1-206ENST00000563343 EPHA7Q15375 998 aa8.52□□□□□ -1.05
HERPUD1-206ENST00000563343 ADCK5Q3MIX3 580 aa8.52□□□□□ -1.05
HERPUD1-206ENST00000563343 GLRA4Q5JXX5 417 aa8.52□□□□□ -1.05
HERPUD1-206ENST00000563343 EEF1DP3Q658K8 133 aa8.52□□□□□ -1.05
HERPUD1-206ENST00000563343 TPGS2Q68CL5 300 aa8.52□□□□□ -1.05
HERPUD1-206ENST00000563343 CDCA2Q69YH5 1023 aaPredicted RBP8.52□□□□□ -1.05
HERPUD1-206ENST00000563343 IQCEQ6IPM2 695 aa8.52□□□□□ -1.05
HERPUD1-206ENST00000563343 OTUD6AQ7L8S5 288 aa8.52□□□□□ -1.05
HERPUD1-206ENST00000563343 PIP4P1Q86T03 277 aa8.52□□□□□ -1.05
HERPUD1-206ENST00000563343 NOSTRINQ8IVI9 506 aa8.52□□□□□ -1.05
HERPUD1-206ENST00000563343 ARID3BQ8IVW6 561 aaPredicted RBP8.52□□□□□ -1.05
HERPUD1-206ENST00000563343 YAF2Q8IY57 180 aa8.52□□□□□ -1.05
HERPUD1-206ENST00000563343 CCDC148Q8NFR7 591 aa8.52□□□□□ -1.05
HERPUD1-206ENST00000563343 HAS1Q92839 578 aa8.52□□□□□ -1.05
HERPUD1-206ENST00000563343 DYDC2Q96IM9 177 aa8.52□□□□□ -1.05
HERPUD1-206ENST00000563343 PRIMPOLQ96LW4 560 aa8.52□□□□□ -1.05
HERPUD1-206ENST00000563343 ZNF512Q96ME7 567 aaPredicted RBP8.52□□□□□ -1.05
HERPUD1-206ENST00000563343 HHIPQ96QV1 700 aa8.52□□□□□ -1.05
HERPUD1-206ENST00000563343 TMEM209Q96SK2 561 aa8.52□□□□□ -1.05
HERPUD1-206ENST00000563343 RNF26Q9BY78 433 aaPredicted RBP8.52□□□□□ -1.05
HERPUD1-206ENST00000563343 DNAJC25Q9H1X3 360 aa8.52□□□□□ -1.05
HERPUD1-206ENST00000563343 SCUBE2Q9NQ36 999 aa8.52□□□□□ -1.05
HERPUD1-206ENST00000563343 ASAH2Q9NR71 780 aa8.52□□□□□ -1.05
HERPUD1-206ENST00000563343 OBP2AQ9NY56 170 aa8.52□□□□□ -1.05
HERPUD1-206ENST00000563343 AFF4Q9UHB7 1163 aaKnown RBP8.52□□□□□ -1.05
HERPUD1-206ENST00000563343 DDX25Q9UHL0 483 aaKnown RBP8.52□□□□□ -1.05
HERPUD1-206ENST00000563343 SLC8A2Q9UPR5 921 aa8.52□□□□□ -1.05
HERPUD1-206ENST00000563343 APC2O95996 2303 aa8.52□□□□□ -1.05
HERPUD1-206ENST00000563343 CCDC194A0A1B0GVG4 234 aa8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 OTOL1A6NHN0 477 aaPredicted RBP8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 TRDMT1O14717 391 aaKnown RBP8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 KHNYNO15037 678 aaKnown RBP8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 RNF40O75150 1001 aa8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 SLITRK3O94933 977 aa8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 PRAMEF12O95522 483 aa8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 ARPP19P56211 112 aa8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 FAM193AP78312 1265 aa8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 SCAPQ12770 1279 aa8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 SEMA3BQ13214 749 aa8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 CTTNQ14247 550 aaKnown RBP8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 KARSQ15046 597 aaKnown RBP8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 ELF2Q15723 593 aa8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 XKR4Q5GH76 650 aa8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 RNF19BQ6ZMZ0 732 aa8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 RAB44Q7Z6P3 723 aaPredicted RBP8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 ELMOD1Q8N336 334 aa8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 CHCHD4Q8N4Q1 142 aa8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 BEST2Q8NFU1 509 aa8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 EZH1Q92800 747 aaPredicted RBP8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 FAM20AQ96MK3 541 aa8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 UROC1Q96N76 676 aa8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 ESYT1Q9BSJ8 1104 aa8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 C22orf23Q9BZE7 217 aa8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 CRISPLD1Q9H336 500 aa8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 ZSWIM4Q9H7M6 989 aa8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 FBRSL1Q9HCM7 1045 aaKnown RBP8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 HPS4Q9NQG7 708 aa8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 SH3GLB2Q9NR46 395 aa8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 RYDENQ9NUL5 291 aaKnown RBP8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 PRMT7Q9NVM4 692 aaPredicted RBP8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 ANKFY1Q9P2R3 1169 aa8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 EBF1Q9UH73 591 aa8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 PCDHA4Q9UN74 947 aa8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 USP20Q9Y2K6 914 aa8.51□□□□□ -1.05
HERPUD1-206ENST00000563343 YIPF1Q9Y548 306 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms