RNA–Protein interactions for RNA: ENST00000562219.1

BBS4-205, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-205ENST00000562219 FBXO18Q8NFZ0 1043 aa11.21□□□□□ -0.61
BBS4-205ENST00000562219 E2F7Q96AV8 911 aa11.21□□□□□ -0.61
BBS4-205ENST00000562219 MSANTD3Q96H12 275 aa11.21□□□□□ -0.61
BBS4-205ENST00000562219 CNTNAP3BQ96NU0 1288 aa11.21□□□□□ -0.61
BBS4-205ENST00000562219 LLPHQ9BRT6 129 aaKnown RBP11.21□□□□□ -0.61
BBS4-205ENST00000562219 CNTNAP3Q9BZ76 1288 aa11.21□□□□□ -0.61
BBS4-205ENST00000562219 GPR88Q9GZN0 384 aa11.21□□□□□ -0.61
BBS4-205ENST00000562219 SLITRK6Q9H5Y7 841 aa11.21□□□□□ -0.61
BBS4-205ENST00000562219 PARD6AQ9NPB6 346 aa11.21□□□□□ -0.61
BBS4-205ENST00000562219 TUBGCP4Q9UGJ1 667 aa11.21□□□□□ -0.61
BBS4-205ENST00000562219 PCDHB8Q9UN66 801 aa11.21□□□□□ -0.61
BBS4-205ENST00000562219 SCN1AP35498 2009 aa11.21□□□□□ -0.62
BBS4-205ENST00000562219 MAP1BP46821 2468 aaKnown RBP11.2□□□□□ -0.62
BBS4-205ENST00000562219 M0QZQ0 153 aa11.2□□□□□ -0.62
BBS4-205ENST00000562219 SLC16A4O15374 487 aa11.2□□□□□ -0.62
BBS4-205ENST00000562219 LRP3O75074 770 aa11.2□□□□□ -0.62
BBS4-205ENST00000562219 CHRNB1P11230 501 aa11.2□□□□□ -0.62
BBS4-205ENST00000562219 GJA1P17302 382 aa11.2□□□□□ -0.62
BBS4-205ENST00000562219 MLLT6P55198 1093 aaPredicted RBP11.2□□□□□ -0.62
BBS4-205ENST00000562219 YWHAHQ04917 246 aaPredicted RBP11.2□□□□□ -0.62
BBS4-205ENST00000562219 STRN3Q13033 797 aa11.2□□□□□ -0.62
BBS4-205ENST00000562219 PTGDRQ13258 359 aa11.2□□□□□ -0.62
BBS4-205ENST00000562219 PLD1Q13393 1074 aa11.2□□□□□ -0.62
BBS4-205ENST00000562219 LRRC32Q14392 662 aa11.2□□□□□ -0.62
BBS4-205ENST00000562219 TEAD2Q15562 447 aa11.2□□□□□ -0.62
BBS4-205ENST00000562219 LPAL2Q16609 132 aa11.2□□□□□ -0.62
BBS4-205ENST00000562219 SLC10A6Q3KNW5 377 aa11.2□□□□□ -0.62
BBS4-205ENST00000562219 KRT79Q5XKE5 535 aa11.2□□□□□ -0.62
BBS4-205ENST00000562219 RINT1Q6NUQ1 792 aa11.2□□□□□ -0.62
BBS4-205ENST00000562219 RNF19BQ6ZMZ0 732 aa11.2□□□□□ -0.62
BBS4-205ENST00000562219 C1orf186Q6ZWK4 172 aa11.2□□□□□ -0.62
BBS4-205ENST00000562219 MFSD6LQ8IWD5 586 aa11.2□□□□□ -0.62
BBS4-205ENST00000562219 CCDC83Q8IWF9 413 aa11.2□□□□□ -0.62
BBS4-205ENST00000562219 SHKBP1Q8TBC3 707 aa11.2□□□□□ -0.62
BBS4-205ENST00000562219 CSGALNACT1Q8TDX6 532 aa11.2□□□□□ -0.62
BBS4-205ENST00000562219 NTPCRQ9BSD7 190 aaKnown RBP11.2□□□□□ -0.62
BBS4-205ENST00000562219 TIPINQ9BVW5 301 aa11.2□□□□□ -0.62
BBS4-205ENST00000562219 OXCT2Q9BYC2 517 aaPredicted RBP11.2□□□□□ -0.62
BBS4-205ENST00000562219 LMAN1LQ9HAT1 526 aa11.2□□□□□ -0.62
BBS4-205ENST00000562219 LIMCH1Q9UPQ0 1083 aa11.2□□□□□ -0.62
BBS4-205ENST00000562219 YIPF1Q9Y548 306 aa11.2□□□□□ -0.62
BBS4-205ENST00000562219 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.2□□□□□ -0.62
BBS4-205ENST00000562219 MYO16Q9Y6X6 1858 aa11.2□□□□□ -0.62
BBS4-205ENST00000562219 KIAA1549LQ6ZVL6 1849 aa11.2□□□□□ -0.62
BBS4-205ENST00000562219 ATG2BQ96BY7 2078 aa11.2□□□□□ -0.62
BBS4-205ENST00000562219 PP2D1A8MPX8 630 aa11.19□□□□□ -0.62
BBS4-205ENST00000562219 HEPACAM2A8MVW5 462 aa11.19□□□□□ -0.62
BBS4-205ENST00000562219 LAD1O00515 517 aa11.19□□□□□ -0.62
BBS4-205ENST00000562219 EIF5BO60841 1220 aaKnown RBP11.19□□□□□ -0.62
BBS4-205ENST00000562219 OAZ2O95190 189 aa11.19□□□□□ -0.62
BBS4-205ENST00000562219 CXCL8P10145 99 aa11.19□□□□□ -0.62
BBS4-205ENST00000562219 CCNE1P24864 410 aa11.19□□□□□ -0.62
BBS4-205ENST00000562219 GUCY2CP25092 1073 aa11.19□□□□□ -0.62
BBS4-205ENST00000562219 MARCKSP29966 332 aaPredicted RBP11.19□□□□□ -0.62
BBS4-205ENST00000562219 CXCL12P48061 93 aa11.19□□□□□ -0.62
BBS4-205ENST00000562219 HMGN5P82970 282 aaKnown RBP11.19□□□□□ -0.62
BBS4-205ENST00000562219 SATB1Q01826 763 aa11.19□□□□□ -0.62
BBS4-205ENST00000562219 FCHO2Q0JRZ9 810 aa11.19□□□□□ -0.62
BBS4-205ENST00000562219 SPEM2Q0P670 501 aa11.19□□□□□ -0.62
BBS4-205ENST00000562219 SEZ6Q53EL9 994 aa11.19□□□□□ -0.62
BBS4-205ENST00000562219 ZPBP2Q6X784 338 aa11.19□□□□□ -0.62
BBS4-205ENST00000562219 PRR23BQ6ZRT6 265 aa11.19□□□□□ -0.62
BBS4-205ENST00000562219 YAF2Q8IY57 180 aa11.19□□□□□ -0.62
BBS4-205ENST00000562219 SPEM1Q8N4L4 309 aa11.19□□□□□ -0.62
BBS4-205ENST00000562219 TMEM161BQ8NDZ6 487 aa11.19□□□□□ -0.62
BBS4-205ENST00000562219 NETO1Q8TDF5 533 aa11.19□□□□□ -0.62
BBS4-205ENST00000562219 SPIRE2Q8WWL2 714 aa11.19□□□□□ -0.62
BBS4-205ENST00000562219 ZBTB45Q96K62 511 aaPredicted RBP11.19□□□□□ -0.62
BBS4-205ENST00000562219 KCNG1Q9UIX4 513 aa11.19□□□□□ -0.62
BBS4-205ENST00000562219 A0A1W2PRU2 124 aa11.18□□□□□ -0.62
BBS4-205ENST00000562219 DCDC2BA2VCK2 349 aa11.18□□□□□ -0.62
BBS4-205ENST00000562219 OR6C75A6NL08 312 aa11.18□□□□□ -0.62
BBS4-205ENST00000562219 SLC38A8A6NNN8 435 aa11.18□□□□□ -0.62
BBS4-205ENST00000562219 SFI1A8K8P3 1242 aa11.18□□□□□ -0.62
BBS4-205ENST00000562219 CHADO15335 359 aa11.18□□□□□ -0.62
BBS4-205ENST00000562219 CLDN3O15551 220 aa11.18□□□□□ -0.62
BBS4-205ENST00000562219 PAPSS2O95340 614 aaPredicted RBP11.18□□□□□ -0.62
BBS4-205ENST00000562219 VNN2O95498 520 aa11.18□□□□□ -0.62
BBS4-205ENST00000562219 RETP07949 1114 aa11.18□□□□□ -0.62
BBS4-205ENST00000562219 MAPTP10636 758 aaKnown RBP11.18□□□□□ -0.62
BBS4-205ENST00000562219 PLS3P13797 630 aa11.18□□□□□ -0.62
BBS4-205ENST00000562219 U2AF2P26368 475 aaKnown RBP eCLIP11.18□□□□□ -0.62
BBS4-205ENST00000562219 LRPAP1P30533 357 aa11.18□□□□□ -0.62
BBS4-205ENST00000562219 PRPHP41219 470 aa11.18□□□□□ -0.62
BBS4-205ENST00000562219 AARSP49588 968 aaKnown RBP eCLIP11.18□□□□□ -0.62
BBS4-205ENST00000562219 TOB1P50616 345 aaPredicted RBP11.18□□□□□ -0.62
BBS4-205ENST00000562219 SMTNP53814 917 aa11.18□□□□□ -0.62
BBS4-205ENST00000562219 EPHB3P54753 998 aa11.18□□□□□ -0.62
BBS4-205ENST00000562219 MCL1Q07820 350 aa11.18□□□□□ -0.62
BBS4-205ENST00000562219 SIM2Q14190 667 aaPredicted RBP11.18□□□□□ -0.62
BBS4-205ENST00000562219 GAS6Q14393 721 aa11.18□□□□□ -0.62
BBS4-205ENST00000562219 KCNK18Q7Z418 384 aa11.18□□□□□ -0.62
BBS4-205ENST00000562219 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.18□□□□□ -0.62
BBS4-205ENST00000562219 USP37Q86T82 979 aa11.18□□□□□ -0.62
BBS4-205ENST00000562219 TMC8Q8IU68 726 aa11.18□□□□□ -0.62
BBS4-205ENST00000562219 FAM184AQ8NB25 1140 aa11.18□□□□□ -0.62
BBS4-205ENST00000562219 RSPRY1Q96DX4 576 aa11.18□□□□□ -0.62
BBS4-205ENST00000562219 PGLYRP2Q96PD5 576 aa11.18□□□□□ -0.62
BBS4-205ENST00000562219 LRRC3Q9BY71 257 aa11.18□□□□□ -0.62
BBS4-205ENST00000562219 DNAJC25Q9H1X3 360 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms