RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 LRRIQ4A6NIV6 560 aa12.42□□□□□ -0.42
PCAT1-202ENST00000561978 OPA1O60313 960 aa12.42□□□□□ -0.42
PCAT1-202ENST00000561978 PQBP1O60828 265 aaKnown RBP12.42□□□□□ -0.42
PCAT1-202ENST00000561978 HOXD8P13378 290 aaPredicted RBP12.42□□□□□ -0.42
PCAT1-202ENST00000561978 CYP11B1P15538 503 aa12.42□□□□□ -0.42
PCAT1-202ENST00000561978 GLRA2P23416 452 aa12.42□□□□□ -0.42
PCAT1-202ENST00000561978 EFNA5P52803 228 aa12.42□□□□□ -0.42
PCAT1-202ENST00000561978 CUL1Q13616 776 aa12.42□□□□□ -0.42
PCAT1-202ENST00000561978 TARBP2Q15633 366 aaKnown RBP12.42□□□□□ -0.42
PCAT1-202ENST00000561978 TRIM60Q495X7 471 aa12.42□□□□□ -0.42
PCAT1-202ENST00000561978 C15orf39Q6ZRI6 1047 aa12.42□□□□□ -0.42
PCAT1-202ENST00000561978 NOP9Q86U38 636 aaKnown RBP12.42□□□□□ -0.42
PCAT1-202ENST00000561978 ZNF677Q86XU0 584 aa12.42□□□□□ -0.42
PCAT1-202ENST00000561978 TCP11Q8WWU5 503 aa12.42□□□□□ -0.42
PCAT1-202ENST00000561978 KAT5Q92993 513 aa12.42□□□□□ -0.42
PCAT1-202ENST00000561978 ARHGEF26Q96DR7 871 aa12.42□□□□□ -0.42
PCAT1-202ENST00000561978 C1orf112Q9NSG2 853 aa12.42□□□□□ -0.42
PCAT1-202ENST00000561978 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.42□□□□□ -0.42
PCAT1-202ENST00000561978 GOLGA6L10A0A0M3HER8 536 aa12.41□□□□□ -0.42
PCAT1-202ENST00000561978 H3BRB1 525 aa12.41□□□□□ -0.42
PCAT1-202ENST00000561978 RAD51CO43502 376 aa12.41□□□□□ -0.42
PCAT1-202ENST00000561978 HSF2BPO75031 334 aa12.41□□□□□ -0.42
PCAT1-202ENST00000561978 MAFO75444 373 aaPredicted RBP12.41□□□□□ -0.42
PCAT1-202ENST00000561978 CABYRO75952 493 aa12.41□□□□□ -0.42
PCAT1-202ENST00000561978 SYF2O95926 243 aaKnown RBP12.41□□□□□ -0.42
PCAT1-202ENST00000561978 F2P00734 622 aa12.41□□□□□ -0.42
PCAT1-202ENST00000561978 CHRNB2P17787 502 aa12.41□□□□□ -0.42
PCAT1-202ENST00000561978 TNNI1P19237 187 aa12.41□□□□□ -0.42
PCAT1-202ENST00000561978 MARK3P27448 753 aa12.41□□□□□ -0.42
PCAT1-202ENST00000561978 MLLT1Q03111 559 aaPredicted RBP12.41□□□□□ -0.42
PCAT1-202ENST00000561978 FAM47CQ5HY64 1035 aa12.41□□□□□ -0.42
PCAT1-202ENST00000561978 IER5Q5VY09 327 aa12.41□□□□□ -0.42
PCAT1-202ENST00000561978 SLC47A2Q86VL8 602 aa12.41□□□□□ -0.42
PCAT1-202ENST00000561978 KLHL7Q8IXQ5 586 aa12.41□□□□□ -0.42
PCAT1-202ENST00000561978 GSPT2Q8IYD1 628 aaKnown RBP12.41□□□□□ -0.42
PCAT1-202ENST00000561978 ASAP3Q8TDY4 903 aa12.41□□□□□ -0.42
PCAT1-202ENST00000561978 IFT81Q8WYA0 676 aa12.41□□□□□ -0.42
PCAT1-202ENST00000561978 GLG1Q92896 1179 aa12.41□□□□□ -0.42
PCAT1-202ENST00000561978 CEP89Q96ST8 783 aa12.41□□□□□ -0.42
PCAT1-202ENST00000561978 RUFY1Q96T51 708 aa12.41□□□□□ -0.42
PCAT1-202ENST00000561978 PCYT2Q99447 389 aa12.41□□□□□ -0.42
PCAT1-202ENST00000561978 JPH2Q9BR39 696 aaPredicted RBP12.41□□□□□ -0.42
PCAT1-202ENST00000561978 HTATIP2Q9BUP3 242 aa12.41□□□□□ -0.42
PCAT1-202ENST00000561978 TUT1Q9H6E5 874 aaKnown RBP12.41□□□□□ -0.42
PCAT1-202ENST00000561978 UVRAGQ9P2Y5 699 aa12.41□□□□□ -0.42
PCAT1-202ENST00000561978 ALG6Q9Y672 507 aa12.41□□□□□ -0.42
PCAT1-202ENST00000561978 DDX3YO15523 660 aaKnown RBP12.41□□□□□ -0.42
PCAT1-202ENST00000561978 SART1O43290 800 aaKnown RBP12.41□□□□□ -0.42
PCAT1-202ENST00000561978 KPNA6O60684 536 aa12.41□□□□□ -0.42
PCAT1-202ENST00000561978 AP3M2P53677 418 aa12.41□□□□□ -0.42
PCAT1-202ENST00000561978 FMO1Q01740 532 aa12.41□□□□□ -0.42
PCAT1-202ENST00000561978 ZACNQ401N2 412 aa12.41□□□□□ -0.42
PCAT1-202ENST00000561978 ZPBP2Q6X784 338 aa12.41□□□□□ -0.42
PCAT1-202ENST00000561978 PALB2Q86YC2 1186 aa12.41□□□□□ -0.42
PCAT1-202ENST00000561978 FBXO22Q8NEZ5 403 aa12.41□□□□□ -0.42
PCAT1-202ENST00000561978 GDAP1L1Q96MZ0 367 aa12.41□□□□□ -0.42
PCAT1-202ENST00000561978 WNT8AQ9H1J5 351 aa12.41□□□□□ -0.42
PCAT1-202ENST00000561978 RNPEPQ9H4A4 650 aa12.41□□□□□ -0.42
PCAT1-202ENST00000561978 GTF3C4Q9UKN8 822 aa12.41□□□□□ -0.42
PCAT1-202ENST00000561978 FAN1Q9Y2M0 1017 aa12.41□□□□□ -0.42
PCAT1-202ENST00000561978 ARVCFO00192 962 aa12.4□□□□□ -0.42
PCAT1-202ENST00000561978 RNF40O75150 1001 aa12.4□□□□□ -0.42
PCAT1-202ENST00000561978 C4BPAP04003 597 aaKnown RBP12.4□□□□□ -0.42
PCAT1-202ENST00000561978 CYP1A2P05177 515 aa12.4□□□□□ -0.42
PCAT1-202ENST00000561978 MMEP08473 750 aa12.4□□□□□ -0.42
PCAT1-202ENST00000561978 GGCXP38435 758 aa12.4□□□□□ -0.42
PCAT1-202ENST00000561978 CARSP49589 748 aaKnown RBP12.4□□□□□ -0.42
PCAT1-202ENST00000561978 PSEN2P49810 448 aa12.4□□□□□ -0.42
PCAT1-202ENST00000561978 MRPS25P82663 173 aaKnown RBP12.4□□□□□ -0.42
PCAT1-202ENST00000561978 TLE2Q04725 743 aa12.4□□□□□ -0.42
PCAT1-202ENST00000561978 MXD4Q14582 209 aaPredicted RBP12.4□□□□□ -0.42
PCAT1-202ENST00000561978 MFSD10Q14728 455 aa12.4□□□□□ -0.42
PCAT1-202ENST00000561978 SMYD5Q6GMV2 418 aa12.4□□□□□ -0.42
PCAT1-202ENST00000561978 ACAD10Q6JQN1 1059 aa12.4□□□□□ -0.42
PCAT1-202ENST00000561978 PPP1R2P3Q6NXS1 205 aa12.4□□□□□ -0.42
PCAT1-202ENST00000561978 PLPPR4Q7Z2D5 763 aa12.4□□□□□ -0.42
PCAT1-202ENST00000561978 MREGQ8N565 214 aa12.4□□□□□ -0.42
PCAT1-202ENST00000561978 TRIM11Q96F44 468 aa12.4□□□□□ -0.42
PCAT1-202ENST00000561978 PCDHB18PQ96TA0 734 aa12.4□□□□□ -0.42
PCAT1-202ENST00000561978 HINFPQ9BQA5 517 aa12.4□□□□□ -0.42
PCAT1-202ENST00000561978 MSTO1Q9BUK6 570 aa12.4□□□□□ -0.42
PCAT1-202ENST00000561978 TOPORSQ9NS56 1045 aaPredicted RBP12.4□□□□□ -0.42
PCAT1-202ENST00000561978 TRMT13Q9NUP7 481 aaKnown RBP12.4□□□□□ -0.42
PCAT1-202ENST00000561978 RBAKQ9NYW8 714 aaPredicted RBP12.4□□□□□ -0.42
PCAT1-202ENST00000561978 COG5Q9UP83 839 aa12.4□□□□□ -0.42
PCAT1-202ENST00000561978 PCDHB2Q9Y5E7 798 aa12.4□□□□□ -0.42
PCAT1-202ENST00000561978 A0A0B4J269 797 aa12.39□□□□□ -0.43
PCAT1-202ENST00000561978 GOLGA8KD6RF30 607 aa12.39□□□□□ -0.43
PCAT1-202ENST00000561978 FGGP02679 453 aa12.39□□□□□ -0.43
PCAT1-202ENST00000561978 KRT5P13647 590 aa12.39□□□□□ -0.43
PCAT1-202ENST00000561978 SLC26A2P50443 739 aa12.39□□□□□ -0.43
PCAT1-202ENST00000561978 SNX17Q15036 470 aa12.39□□□□□ -0.43
PCAT1-202ENST00000561978 C7orf61Q8IZ16 206 aa12.39□□□□□ -0.43
PCAT1-202ENST00000561978 OTUD6BQ8N6M0 293 aa12.39□□□□□ -0.43
PCAT1-202ENST00000561978 C7orf31Q8N865 590 aa12.39□□□□□ -0.43
PCAT1-202ENST00000561978 CASKIN2Q8WXE0 1202 aa12.39□□□□□ -0.43
PCAT1-202ENST00000561978 ZNF516Q92618 1163 aa12.39□□□□□ -0.43
PCAT1-202ENST00000561978 TATDN2Q93075 761 aa12.39□□□□□ -0.43
PCAT1-202ENST00000561978 AP1M1Q9BXS5 423 aa12.39□□□□□ -0.43
PCAT1-202ENST00000561978 MFRPQ9BY79 579 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms