RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 PIAS3Q9Y6X2 628 aa12.91□□□□□ -0.34
CARMIL3-204ENST00000561354 COL4A2P08572 1712 aa12.91□□□□□ -0.34
CARMIL3-204ENST00000561354 F5P12259 2224 aa12.9□□□□□ -0.34
CARMIL3-204ENST00000561354 PP2D1A8MPX8 630 aa12.9□□□□□ -0.34
CARMIL3-204ENST00000561354 ARNTLO00327 626 aa12.9□□□□□ -0.34
CARMIL3-204ENST00000561354 ZNF263O14978 683 aa12.9□□□□□ -0.34
CARMIL3-204ENST00000561354 CLDN3O15551 220 aa12.9□□□□□ -0.34
CARMIL3-204ENST00000561354 HARSP12081 509 aaKnown RBP12.9□□□□□ -0.34
CARMIL3-204ENST00000561354 MYL4P12829 197 aa12.9□□□□□ -0.34
CARMIL3-204ENST00000561354 PLS3P13797 630 aa12.9□□□□□ -0.34
CARMIL3-204ENST00000561354 CPB1P15086 417 aa12.9□□□□□ -0.34
CARMIL3-204ENST00000561354 LRPAP1P30533 357 aa12.9□□□□□ -0.34
CARMIL3-204ENST00000561354 VIPR2P41587 438 aa12.9□□□□□ -0.34
CARMIL3-204ENST00000561354 AARSP49588 968 aaKnown RBP eCLIP12.9□□□□□ -0.34
CARMIL3-204ENST00000561354 CCR3P51677 355 aa12.9□□□□□ -0.34
CARMIL3-204ENST00000561354 SMTNP53814 917 aa12.9□□□□□ -0.34
CARMIL3-204ENST00000561354 ATXN1P54253 815 aaKnown RBP12.9□□□□□ -0.34
CARMIL3-204ENST00000561354 YWHAHQ04917 246 aaPredicted RBP12.9□□□□□ -0.34
CARMIL3-204ENST00000561354 MCL1Q07820 350 aa12.9□□□□□ -0.34
CARMIL3-204ENST00000561354 PLD1Q13393 1074 aa12.9□□□□□ -0.34
CARMIL3-204ENST00000561354 ZBTB6Q15916 424 aa12.9□□□□□ -0.34
CARMIL3-204ENST00000561354 IL17AQ16552 155 aa12.9□□□□□ -0.34
CARMIL3-204ENST00000561354 C1orf228Q6PIY5 440 aa12.9□□□□□ -0.34
CARMIL3-204ENST00000561354 DTHD1Q6ZMT9 781 aa12.9□□□□□ -0.34
CARMIL3-204ENST00000561354 RNF19BQ6ZMZ0 732 aa12.9□□□□□ -0.34
CARMIL3-204ENST00000561354 KCNK18Q7Z418 384 aa12.9□□□□□ -0.34
CARMIL3-204ENST00000561354 CELF5Q8N6W0 485 aaKnown RBP12.9□□□□□ -0.34
CARMIL3-204ENST00000561354 TMEM161BQ8NDZ6 487 aa12.9□□□□□ -0.34
CARMIL3-204ENST00000561354 KCNN1Q92952 543 aa12.9□□□□□ -0.34
CARMIL3-204ENST00000561354 MSANTD3Q96H12 275 aa12.9□□□□□ -0.34
CARMIL3-204ENST00000561354 MMTAG2Q9BU76 263 aaKnown RBP12.9□□□□□ -0.34
CARMIL3-204ENST00000561354 LRRC3Q9BY71 257 aa12.9□□□□□ -0.34
CARMIL3-204ENST00000561354 TUBGCP4Q9UGJ1 667 aa12.9□□□□□ -0.34
CARMIL3-204ENST00000561354 GMEB2Q9UKD1 530 aa12.9□□□□□ -0.34
CARMIL3-204ENST00000561354 PDCD11Q14690 1871 aaKnown RBP12.89□□□□□ -0.35
CARMIL3-204ENST00000561354 TTC26A0AVF1 554 aa12.89□□□□□ -0.35
CARMIL3-204ENST00000561354 HEPACAM2A8MVW5 462 aa12.89□□□□□ -0.35
CARMIL3-204ENST00000561354 CLTAP09496 248 aa12.89□□□□□ -0.35
CARMIL3-204ENST00000561354 MAPTP10636 758 aaKnown RBP12.89□□□□□ -0.35
CARMIL3-204ENST00000561354 CHRNB1P11230 501 aa12.89□□□□□ -0.35
CARMIL3-204ENST00000561354 GJA1P17302 382 aa12.89□□□□□ -0.35
CARMIL3-204ENST00000561354 CYP3A5P20815 502 aa12.89□□□□□ -0.35
CARMIL3-204ENST00000561354 CDC25AP30304 524 aa12.89□□□□□ -0.35
CARMIL3-204ENST00000561354 GPR17Q13304 367 aa12.89□□□□□ -0.35
CARMIL3-204ENST00000561354 TEAD2Q15562 447 aa12.89□□□□□ -0.35
CARMIL3-204ENST00000561354 SEZ6Q53EL9 994 aa12.89□□□□□ -0.35
CARMIL3-204ENST00000561354 HYIQ5T013 277 aa12.89□□□□□ -0.35
CARMIL3-204ENST00000561354 SYT2Q8N9I0 419 aaPredicted RBP12.89□□□□□ -0.35
CARMIL3-204ENST00000561354 SHKBP1Q8TBC3 707 aa12.89□□□□□ -0.35
CARMIL3-204ENST00000561354 RTKNQ9BST9 563 aa12.89□□□□□ -0.35
CARMIL3-204ENST00000561354 BACH2Q9BYV9 841 aa12.89□□□□□ -0.35
CARMIL3-204ENST00000561354 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.89□□□□□ -0.35
CARMIL3-204ENST00000561354 SH2B1Q9NRF2 756 aaPredicted RBP12.89□□□□□ -0.35
CARMIL3-204ENST00000561354 KCND2Q9NZV8 630 aa12.89□□□□□ -0.35
CARMIL3-204ENST00000561354 ANKFY1Q9P2R3 1169 aa12.89□□□□□ -0.35
CARMIL3-204ENST00000561354 CDV3Q9UKY7 258 aaKnown RBP12.89□□□□□ -0.35
CARMIL3-204ENST00000561354 UBQLN1Q9UMX0 589 aaKnown RBP12.89□□□□□ -0.35
CARMIL3-204ENST00000561354 YIPF1Q9Y548 306 aa12.89□□□□□ -0.35
CARMIL3-204ENST00000561354 DMXL1Q9Y485 3027 aa12.89□□□□□ -0.35
CARMIL3-204ENST00000561354 TICRRQ7Z2Z1 1910 aa12.88□□□□□ -0.35
CARMIL3-204ENST00000561354 OR6C75A6NL08 312 aa12.88□□□□□ -0.35
CARMIL3-204ENST00000561354 H0YCG3 227 aa12.88□□□□□ -0.35
CARMIL3-204ENST00000561354 CHADO15335 359 aa12.88□□□□□ -0.35
CARMIL3-204ENST00000561354 VNN2O95498 520 aa12.88□□□□□ -0.35
CARMIL3-204ENST00000561354 CXCL8P10145 99 aa12.88□□□□□ -0.35
CARMIL3-204ENST00000561354 CCNE1P24864 410 aa12.88□□□□□ -0.35
CARMIL3-204ENST00000561354 CXCL12P48061 93 aa12.88□□□□□ -0.35
CARMIL3-204ENST00000561354 FCHO2Q0JRZ9 810 aa12.88□□□□□ -0.35
CARMIL3-204ENST00000561354 KYAT1Q16773 422 aa12.88□□□□□ -0.35
CARMIL3-204ENST00000561354 LAIR1Q6GTX8 287 aa12.88□□□□□ -0.35
CARMIL3-204ENST00000561354 USP37Q86T82 979 aa12.88□□□□□ -0.35
CARMIL3-204ENST00000561354 TMC8Q8IU68 726 aa12.88□□□□□ -0.35
CARMIL3-204ENST00000561354 SPEM1Q8N4L4 309 aa12.88□□□□□ -0.35
CARMIL3-204ENST00000561354 CSGALNACT1Q8TDX6 532 aa12.88□□□□□ -0.35
CARMIL3-204ENST00000561354 TSPAN18Q96SJ8 248 aa12.88□□□□□ -0.35
CARMIL3-204ENST00000561354 C8orf33Q9H7E9 229 aaPredicted RBP12.88□□□□□ -0.35
CARMIL3-204ENST00000561354 PARD6AQ9NPB6 346 aa12.88□□□□□ -0.35
CARMIL3-204ENST00000561354 RAB23Q9ULC3 237 aa12.88□□□□□ -0.35
CARMIL3-204ENST00000561354 USP18Q9UMW8 372 aa12.88□□□□□ -0.35
CARMIL3-204ENST00000561354 NCANO14594 1321 aa12.88□□□□□ -0.35
CARMIL3-204ENST00000561354 A0A1W2PRU2 124 aa12.87□□□□□ -0.35
CARMIL3-204ENST00000561354 XPOTO43592 962 aaKnown RBP12.87□□□□□ -0.35
CARMIL3-204ENST00000561354 LRP3O75074 770 aa12.87□□□□□ -0.35
CARMIL3-204ENST00000561354 PAPSS2O95340 614 aaPredicted RBP12.87□□□□□ -0.35
CARMIL3-204ENST00000561354 SEC24BO95487 1268 aa12.87□□□□□ -0.35
CARMIL3-204ENST00000561354 TYMPP19971 482 aa12.87□□□□□ -0.35
CARMIL3-204ENST00000561354 SCP2P22307 547 aa12.87□□□□□ -0.35
CARMIL3-204ENST00000561354 PAX3P23760 479 aa12.87□□□□□ -0.35
CARMIL3-204ENST00000561354 CNR2P34972 360 aa12.87□□□□□ -0.35
CARMIL3-204ENST00000561354 ANP32AP39687 249 aaKnown RBP12.87□□□□□ -0.35
CARMIL3-204ENST00000561354 EPHB3P54753 998 aa12.87□□□□□ -0.35
CARMIL3-204ENST00000561354 DUSP4Q13115 394 aa12.87□□□□□ -0.35
CARMIL3-204ENST00000561354 MYBPC2Q14324 1141 aa12.87□□□□□ -0.35
CARMIL3-204ENST00000561354 LRRC32Q14392 662 aa12.87□□□□□ -0.35
CARMIL3-204ENST00000561354 GAS6Q14393 721 aa12.87□□□□□ -0.35
CARMIL3-204ENST00000561354 CENPPQ6IPU0 288 aa12.87□□□□□ -0.35
CARMIL3-204ENST00000561354 YAF2Q8IY57 180 aa12.87□□□□□ -0.35
CARMIL3-204ENST00000561354 RSPRY1Q96DX4 576 aa12.87□□□□□ -0.35
CARMIL3-204ENST00000561354 KIF12Q96FN5 646 aa12.87□□□□□ -0.35
CARMIL3-204ENST00000561354 PGLYRP2Q96PD5 576 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms