RNA–Protein interactions for RNA: ENST00000561239.6

SHF-210, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3

Gene SHF, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-210ENST00000561239 C12orf76Q8N812 135 aaPredicted RBP14.66□□□□□ -0.06
SHF-210ENST00000561239 TRIML1Q8N9V2 468 aa14.66□□□□□ -0.06
SHF-210ENST00000561239 C3orf58Q8NDZ4 430 aa14.66□□□□□ -0.06
SHF-210ENST00000561239 APPL2Q8NEU8 664 aa14.66□□□□□ -0.06
SHF-210ENST00000561239 BEST2Q8NFU1 509 aa14.66□□□□□ -0.06
SHF-210ENST00000561239 FAM212AQ96EL1 285 aa14.66□□□□□ -0.06
SHF-210ENST00000561239 ZDHHC7Q9NXF8 308 aa14.66□□□□□ -0.06
SHF-210ENST00000561239 RBAKQ9NYW8 714 aaPredicted RBP14.66□□□□□ -0.06
SHF-210ENST00000561239 MAPK8IP1Q9UQF2 711 aa14.66□□□□□ -0.06
SHF-210ENST00000561239 USTQ9Y2C2 406 aa14.66□□□□□ -0.06
SHF-210ENST00000561239 CCDC195A0A1B0GUA6 201 aa14.65□□□□□ -0.06
SHF-210ENST00000561239 ARHGEF37A1IGU5 675 aa14.65□□□□□ -0.06
SHF-210ENST00000561239 ZNF233A6NK53 670 aa14.65□□□□□ -0.06
SHF-210ENST00000561239 NR3C1P04150 777 aa14.65□□□□□ -0.06
SHF-210ENST00000561239 MCM4P33991 863 aa14.65□□□□□ -0.06
SHF-210ENST00000561239 SPAG1Q07617 926 aa14.65□□□□□ -0.06
SHF-210ENST00000561239 TMEM132DQ14C87 1099 aa14.65□□□□□ -0.06
SHF-210ENST00000561239 SNRNP35Q16560 246 aaKnown RBP14.65□□□□□ -0.06
SHF-210ENST00000561239 CAMK4Q16566 473 aa14.65□□□□□ -0.06
SHF-210ENST00000561239 EDRF1Q3B7T1 1238 aa14.65□□□□□ -0.06
SHF-210ENST00000561239 LIN9Q5TKA1 542 aa14.65□□□□□ -0.06
SHF-210ENST00000561239 LILRA6Q6PI73 481 aa14.65□□□□□ -0.06
SHF-210ENST00000561239 FOXR2Q6PJQ5 311 aa14.65□□□□□ -0.06
SHF-210ENST00000561239 RBM43Q6ZSC3 357 aaKnown RBP14.65□□□□□ -0.06
SHF-210ENST00000561239 RNF135Q8IUD6 432 aa14.65□□□□□ -0.06
SHF-210ENST00000561239 PLCD3Q8N3E9 789 aa14.65□□□□□ -0.06
SHF-210ENST00000561239 TMEM130Q8N3G9 435 aa14.65□□□□□ -0.06
SHF-210ENST00000561239 KREMEN2Q8NCW0 462 aa14.65□□□□□ -0.06
SHF-210ENST00000561239 CXorf38Q8TB03 319 aa14.65□□□□□ -0.06
SHF-210ENST00000561239 ACSF2Q96CM8 615 aaPredicted RBP14.65□□□□□ -0.06
SHF-210ENST00000561239 MFSD14AQ96MC6 490 aa14.65□□□□□ -0.06
SHF-210ENST00000561239 CLSTN3Q9BQT9 956 aa14.65□□□□□ -0.06
SHF-210ENST00000561239 OXCT2Q9BYC2 517 aaPredicted RBP14.65□□□□□ -0.06
SHF-210ENST00000561239 POMKQ9H5K3 350 aa14.65□□□□□ -0.06
SHF-210ENST00000561239 MTRRQ9UBK8 725 aa14.65□□□□□ -0.06
SHF-210ENST00000561239 ANO9A1A5B4 782 aa14.64□□□□□ -0.07
SHF-210ENST00000561239 PPP1R3GB7ZBB8 358 aa14.64□□□□□ -0.07
SHF-210ENST00000561239 MAPK13O15264 365 aa14.64□□□□□ -0.07
SHF-210ENST00000561239 CD44P16070 742 aaKnown RBP14.64□□□□□ -0.07
SHF-210ENST00000561239 RPL17P18621 184 aaKnown RBP14.64□□□□□ -0.07
SHF-210ENST00000561239 BRCC3P46736 316 aa14.64□□□□□ -0.07
SHF-210ENST00000561239 AARSP49588 968 aaKnown RBP eCLIP14.64□□□□□ -0.07
SHF-210ENST00000561239 CYP2J2P51589 502 aa14.64□□□□□ -0.07
SHF-210ENST00000561239 CLDN10P78369 228 aa14.64□□□□□ -0.07
SHF-210ENST00000561239 CYP24A1Q07973 514 aa14.64□□□□□ -0.07
SHF-210ENST00000561239 RAB33AQ14088 237 aa14.64□□□□□ -0.07
SHF-210ENST00000561239 PSMD6Q15008 389 aa14.64□□□□□ -0.07
SHF-210ENST00000561239 UVSSAQ2YD98 709 aa14.64□□□□□ -0.07
SHF-210ENST00000561239 CCDC149Q6ZUS6 474 aa14.64□□□□□ -0.07
SHF-210ENST00000561239 GLYCTKQ8IVS8 523 aa14.64□□□□□ -0.07
SHF-210ENST00000561239 PLEKHO2Q8TD55 490 aa14.64□□□□□ -0.07
SHF-210ENST00000561239 SUSD3Q96L08 255 aa14.64□□□□□ -0.07
SHF-210ENST00000561239 EPHX3Q9H6B9 360 aa14.64□□□□□ -0.07
SHF-210ENST00000561239 PIDD1Q9HB75 910 aa14.64□□□□□ -0.07
SHF-210ENST00000561239 PDE11AQ9HCR9 933 aa14.64□□□□□ -0.07
SHF-210ENST00000561239 PTPRJQ12913 1337 aa14.64□□□□□ -0.07
SHF-210ENST00000561239 NCOR1O75376 2440 aa14.63□□□□□ -0.07
SHF-210ENST00000561239 PIRO00625 290 aa14.63□□□□□ -0.07
SHF-210ENST00000561239 CALUO43852 315 aaPredicted RBP14.63□□□□□ -0.07
SHF-210ENST00000561239 PAPLNO95428 1278 aa14.63□□□□□ -0.07
SHF-210ENST00000561239 HNRNPA1P09651 372 aaKnown RBP eCLIP14.63□□□□□ -0.07
SHF-210ENST00000561239 TKTP29401 623 aaKnown RBP14.63□□□□□ -0.07
SHF-210ENST00000561239 OR1D2P34982 312 aa14.63□□□□□ -0.07
SHF-210ENST00000561239 PPP1R2P41236 205 aa14.63□□□□□ -0.07
SHF-210ENST00000561239 PMS1P54277 932 aaKnown RBP14.63□□□□□ -0.07
SHF-210ENST00000561239 SURF1Q15526 300 aa14.63□□□□□ -0.07
SHF-210ENST00000561239 TMEM31Q5JXX7 168 aa14.63□□□□□ -0.07
SHF-210ENST00000561239 VARS2Q5ST30 1063 aaKnown RBP14.63□□□□□ -0.07
SHF-210ENST00000561239 OTOP3Q7RTS5 596 aa14.63□□□□□ -0.07
SHF-210ENST00000561239 TDRD5Q8NAT2 981 aaKnown RBP14.63□□□□□ -0.07
SHF-210ENST00000561239 DHTKD1Q96HY7 919 aaPredicted RBP14.63□□□□□ -0.07
SHF-210ENST00000561239 PRKD2Q9BZL6 878 aa14.63□□□□□ -0.07
SHF-210ENST00000561239 NUP62CLQ9H1M0 184 aa14.63□□□□□ -0.07
SHF-210ENST00000561239 FBXW11Q9UKB1 542 aa14.63□□□□□ -0.07
SHF-210ENST00000561239 PCDHB8Q9UN66 801 aa14.63□□□□□ -0.07
SHF-210ENST00000561239 CDY1Q9Y6F8 540 aa14.63□□□□□ -0.07
SHF-210ENST00000561239 I3L4J1 428 aa14.62□□□□□ -0.07
SHF-210ENST00000561239 PPEF2O14830 753 aa14.62□□□□□ -0.07
SHF-210ENST00000561239 EXOC3O60645 756 aa14.62□□□□□ -0.07
SHF-210ENST00000561239 GPR37L1O60883 481 aa14.62□□□□□ -0.07
SHF-210ENST00000561239 XYLBO75191 536 aa14.62□□□□□ -0.07
SHF-210ENST00000561239 ZMYND10O75800 440 aa14.62□□□□□ -0.07
SHF-210ENST00000561239 AKAP3O75969 853 aa14.62□□□□□ -0.07
SHF-210ENST00000561239 MBD3O95983 291 aa14.62□□□□□ -0.07
SHF-210ENST00000561239 WEE2P0C1S8 567 aa14.62□□□□□ -0.07
SHF-210ENST00000561239 SPATA31D3P0C874 917 aa14.62□□□□□ -0.07
SHF-210ENST00000561239 NR2F2P24468 414 aa14.62□□□□□ -0.07
SHF-210ENST00000561239 CCNE1P24864 410 aa14.62□□□□□ -0.07
SHF-210ENST00000561239 HOXA9P31269 272 aa14.62□□□□□ -0.07
SHF-210ENST00000561239 ELF1P32519 619 aa14.62□□□□□ -0.07
SHF-210ENST00000561239 CASP4P49662 377 aa14.62□□□□□ -0.07
SHF-210ENST00000561239 GUCY2FP51841 1108 aa14.62□□□□□ -0.07
SHF-210ENST00000561239 LRRC63Q05C16 580 aa14.62□□□□□ -0.07
SHF-210ENST00000561239 ENPEPQ07075 957 aa14.62□□□□□ -0.07
SHF-210ENST00000561239 PPM1LQ5SGD2 360 aa14.62□□□□□ -0.07
SHF-210ENST00000561239 C9orf57Q5W0N0 161 aa14.62□□□□□ -0.07
SHF-210ENST00000561239 ISM2Q6H9L7 571 aa14.62□□□□□ -0.07
SHF-210ENST00000561239 SLC8B1Q6J4K2 584 aa14.62□□□□□ -0.07
SHF-210ENST00000561239 ZNF280DQ6N043 979 aa14.62□□□□□ -0.07
SHF-210ENST00000561239 DSTYKQ6XUX3 929 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms