RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 CFAP45Q9UL16 551 aa11.7□□□□□ -0.54
TPM1-227ENST00000560970 ODF2LQ9ULJ1 636 aa11.7□□□□□ -0.54
TPM1-227ENST00000560970 PCDHGA2Q9Y5H1 932 aa11.7□□□□□ -0.54
TPM1-227ENST00000560970 INSL5Q9Y5Q6 135 aa11.7□□□□□ -0.54
TPM1-227ENST00000560970 SMIM28A0A1B0GU29 152 aa11.69□□□□□ -0.54
TPM1-227ENST00000560970 K7ERI5 159 aa11.69□□□□□ -0.54
TPM1-227ENST00000560970 FAM13AO94988 1023 aa11.69□□□□□ -0.54
TPM1-227ENST00000560970 FCARP24071 287 aa11.69□□□□□ -0.54
TPM1-227ENST00000560970 IGFBP6P24592 240 aaPredicted RBP11.69□□□□□ -0.54
TPM1-227ENST00000560970 ELF1P32519 619 aa11.69□□□□□ -0.54
TPM1-227ENST00000560970 NCKAP1LP55160 1127 aa11.69□□□□□ -0.54
TPM1-227ENST00000560970 PLCB2Q00722 1185 aa11.69□□□□□ -0.54
TPM1-227ENST00000560970 PRSS36Q5K4E3 855 aa11.69□□□□□ -0.54
TPM1-227ENST00000560970 ZBTB41Q5SVQ8 909 aa11.69□□□□□ -0.54
TPM1-227ENST00000560970 ZNF280DQ6N043 979 aa11.69□□□□□ -0.54
TPM1-227ENST00000560970 MPZL3Q6UWV2 235 aa11.69□□□□□ -0.54
TPM1-227ENST00000560970 CCDC73Q6ZRK6 1079 aa11.69□□□□□ -0.54
TPM1-227ENST00000560970 DYMQ7RTS9 669 aa11.69□□□□□ -0.54
TPM1-227ENST00000560970 SUMF1Q8NBK3 374 aa11.69□□□□□ -0.54
TPM1-227ENST00000560970 ZNF461Q8TAF7 563 aa11.69□□□□□ -0.54
TPM1-227ENST00000560970 SPIRE2Q8WWL2 714 aa11.69□□□□□ -0.54
TPM1-227ENST00000560970 DDX12PQ92771 950 aa11.69□□□□□ -0.54
TPM1-227ENST00000560970 ELSPBP1Q96BH3 223 aa11.69□□□□□ -0.54
TPM1-227ENST00000560970 DHX58Q96C10 678 aa11.69□□□□□ -0.54
TPM1-227ENST00000560970 DNAJC19Q96DA6 116 aa11.69□□□□□ -0.54
TPM1-227ENST00000560970 BORCS6Q96GS4 357 aa11.69□□□□□ -0.54
TPM1-227ENST00000560970 ACO2Q99798 780 aaKnown RBP11.69□□□□□ -0.54
TPM1-227ENST00000560970 C17orf75Q9HAS0 396 aa11.69□□□□□ -0.54
TPM1-227ENST00000560970 CNTN3Q9P232 1028 aa11.69□□□□□ -0.54
TPM1-227ENST00000560970 NCDNQ9UBB6 729 aa11.69□□□□□ -0.54
TPM1-227ENST00000560970 SMG5Q9UPR3 1016 aaKnown RBP11.69□□□□□ -0.54
TPM1-227ENST00000560970 MRPS17Q9Y2R5 130 aaKnown RBP11.69□□□□□ -0.54
TPM1-227ENST00000560970 MTF2Q9Y483 593 aaPredicted RBP11.69□□□□□ -0.54
TPM1-227ENST00000560970 EML5Q05BV3 1969 aa11.68□□□□□ -0.54
TPM1-227ENST00000560970 FAM170BA6NMN3 283 aa11.68□□□□□ -0.54
TPM1-227ENST00000560970 H7C4K7 107 aa11.68□□□□□ -0.54
TPM1-227ENST00000560970 K7ENM7 598 aa11.68□□□□□ -0.54
TPM1-227ENST00000560970 ABLIM1O14639 778 aa11.68□□□□□ -0.54
TPM1-227ENST00000560970 NCAM2O15394 837 aa11.68□□□□□ -0.54
TPM1-227ENST00000560970 ABLIM3O94929 683 aa11.68□□□□□ -0.54
TPM1-227ENST00000560970 KRT18P05783 430 aaKnown RBP11.68□□□□□ -0.54
TPM1-227ENST00000560970 MAPTP10636 758 aaKnown RBP11.68□□□□□ -0.54
TPM1-227ENST00000560970 MCF2P10911 925 aa11.68□□□□□ -0.54
TPM1-227ENST00000560970 ATF2P15336 505 aa11.68□□□□□ -0.54
TPM1-227ENST00000560970 KCNE1P15382 129 aa11.68□□□□□ -0.54
TPM1-227ENST00000560970 PROZP22891 400 aa11.68□□□□□ -0.54
TPM1-227ENST00000560970 RPS9P46781 194 aaKnown RBP11.68□□□□□ -0.54
TPM1-227ENST00000560970 OSTNP61366 133 aa11.68□□□□□ -0.54
TPM1-227ENST00000560970 PUM1Q14671 1186 aaKnown RBP eCLIP11.68□□□□□ -0.545e-9■□□□□ 8.1
TPM1-227ENST00000560970 NOLC1Q14978 699 aaKnown RBP eCLIP11.68□□□□□ -0.54
TPM1-227ENST00000560970 ALKAL1Q6UXT8 129 aa11.68□□□□□ -0.54
TPM1-227ENST00000560970 PDZD4Q76G19 769 aaPredicted RBP11.68□□□□□ -0.54
TPM1-227ENST00000560970 SV2BQ7L1I2 683 aa11.68□□□□□ -0.54
TPM1-227ENST00000560970 SFR1Q86XK3 245 aa11.68□□□□□ -0.54
TPM1-227ENST00000560970 TCEAL8Q8IYN2 117 aa11.68□□□□□ -0.54
TPM1-227ENST00000560970 CLDN23Q96B33 292 aa11.68□□□□□ -0.54
TPM1-227ENST00000560970 MCRS1Q96EZ8 462 aa11.68□□□□□ -0.54
TPM1-227ENST00000560970 SPATA32Q96LK8 384 aa11.68□□□□□ -0.54
TPM1-227ENST00000560970 ZMAT2Q96NC0 199 aaKnown RBP11.68□□□□□ -0.54
TPM1-227ENST00000560970 CORO1BQ9BR76 489 aa11.68□□□□□ -0.54
TPM1-227ENST00000560970 NTPCRQ9BSD7 190 aaKnown RBP11.68□□□□□ -0.54
TPM1-227ENST00000560970 IER2Q9BTL4 223 aa11.68□□□□□ -0.54
TPM1-227ENST00000560970 TARS2Q9BW92 718 aaKnown RBP11.68□□□□□ -0.54
TPM1-227ENST00000560970 FGFBP2Q9BYJ0 223 aa11.68□□□□□ -0.54
TPM1-227ENST00000560970 EPC1Q9H2F5 836 aa11.68□□□□□ -0.54
TPM1-227ENST00000560970 TMEM134Q9H6X4 195 aa11.68□□□□□ -0.54
TPM1-227ENST00000560970 PARVGQ9HBI0 331 aa11.68□□□□□ -0.54
TPM1-227ENST00000560970 PTPRHQ9HD43 1115 aa11.68□□□□□ -0.54
TPM1-227ENST00000560970 HEBP1Q9NRV9 189 aa11.68□□□□□ -0.54
TPM1-227ENST00000560970 ANKFY1Q9P2R3 1169 aa11.68□□□□□ -0.54
TPM1-227ENST00000560970 NUB1Q9Y5A7 615 aa11.68□□□□□ -0.54
TPM1-227ENST00000560970 SPAG17Q6Q759 2223 aa11.68□□□□□ -0.54
TPM1-227ENST00000560970 SCN1AP35498 2009 aa11.67□□□□□ -0.54
TPM1-227ENST00000560970 MED19A0JLT2 244 aaPredicted RBP11.67□□□□□ -0.54
TPM1-227ENST00000560970 ZNF197O14709 1029 aa11.67□□□□□ -0.54
TPM1-227ENST00000560970 POLR2DO15514 142 aaKnown RBP11.67□□□□□ -0.54
TPM1-227ENST00000560970 TBC1D4O60343 1298 aa11.67□□□□□ -0.54
TPM1-227ENST00000560970 TBCAO75347 108 aaKnown RBP11.67□□□□□ -0.54
TPM1-227ENST00000560970 MICAL2O94851 1124 aa11.67□□□□□ -0.54
TPM1-227ENST00000560970 HARSP12081 509 aaKnown RBP11.67□□□□□ -0.54
TPM1-227ENST00000560970 PTPN2P17706 415 aa11.67□□□□□ -0.54
TPM1-227ENST00000560970 CD72P21854 359 aa11.67□□□□□ -0.54
TPM1-227ENST00000560970 NMT1P30419 496 aaKnown RBP11.67□□□□□ -0.54
TPM1-227ENST00000560970 RPL9P32969 192 aaKnown RBP11.67□□□□□ -0.54
TPM1-227ENST00000560970 MCM4P33991 863 aa11.67□□□□□ -0.54
TPM1-227ENST00000560970 NUCB2P80303 420 aa11.67□□□□□ -0.54
TPM1-227ENST00000560970 CSTF1Q05048 431 aaKnown RBP11.67□□□□□ -0.54
TPM1-227ENST00000560970 GRM2Q14416 872 aa11.67□□□□□ -0.54
TPM1-227ENST00000560970 CTXN3Q4LDR2 81 aa11.67□□□□□ -0.54
TPM1-227ENST00000560970 TPGS2Q68CL5 300 aa11.67□□□□□ -0.54
TPM1-227ENST00000560970 ZNF852Q6ZMS4 543 aa11.67□□□□□ -0.54
TPM1-227ENST00000560970 ELMOD1Q8N336 334 aa11.67□□□□□ -0.54
TPM1-227ENST00000560970 MYCT1Q8N699 235 aa11.67□□□□□ -0.54
TPM1-227ENST00000560970 LEMD2Q8NC56 503 aa11.67□□□□□ -0.54
TPM1-227ENST00000560970 ZBTB44Q8NCP5 570 aa11.67□□□□□ -0.54
TPM1-227ENST00000560970 SECISBP2LQ93073 1101 aaKnown RBP11.67□□□□□ -0.54
TPM1-227ENST00000560970 SUSD3Q96L08 255 aa11.67□□□□□ -0.54
TPM1-227ENST00000560970 ACAP3Q96P50 834 aa11.67□□□□□ -0.54
TPM1-227ENST00000560970 NELL2Q99435 816 aa11.67□□□□□ -0.54
TPM1-227ENST00000560970 HAPLN2Q9GZV7 340 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms