RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 LHX6Q9UPM6 363 aa9.85□□□□□ -0.83
RABGGTA-217ENST00000560521 DSPP15924 2871 aaKnown RBP9.85□□□□□ -0.83
RABGGTA-217ENST00000560521 SCN1AP35498 2009 aa9.84□□□□□ -0.83
RABGGTA-217ENST00000560521 SMIM28A0A1B0GU29 152 aa9.84□□□□□ -0.83
RABGGTA-217ENST00000560521 TAF4O00268 1085 aa9.84□□□□□ -0.83
RABGGTA-217ENST00000560521 ACKR2O00590 384 aa9.84□□□□□ -0.83
RABGGTA-217ENST00000560521 MARCH6O60337 910 aa9.84□□□□□ -0.83
RABGGTA-217ENST00000560521 USO1O60763 962 aaKnown RBP9.84□□□□□ -0.83
RABGGTA-217ENST00000560521 AKAP3O75969 853 aa9.84□□□□□ -0.83
RABGGTA-217ENST00000560521 GCFC2P16383 781 aaKnown RBP9.84□□□□□ -0.83
RABGGTA-217ENST00000560521 EARS2Q5JPH6 523 aaKnown RBP9.84□□□□□ -0.83
RABGGTA-217ENST00000560521 STXBP5Q5T5C0 1151 aa9.84□□□□□ -0.83
RABGGTA-217ENST00000560521 BLOC1S2Q6QNY1 142 aa9.84□□□□□ -0.83
RABGGTA-217ENST00000560521 ARID3BQ8IVW6 561 aaPredicted RBP9.84□□□□□ -0.83
RABGGTA-217ENST00000560521 ZBTB8OSQ8IWT0 167 aa9.84□□□□□ -0.83
RABGGTA-217ENST00000560521 TRIM22Q8IYM9 498 aa9.84□□□□□ -0.83
RABGGTA-217ENST00000560521 LEMD2Q8NC56 503 aa9.84□□□□□ -0.83
RABGGTA-217ENST00000560521 BSNDQ8WZ55 320 aa9.84□□□□□ -0.83
RABGGTA-217ENST00000560521 JAKMIP1Q96N16 626 aaKnown RBP9.84□□□□□ -0.83
RABGGTA-217ENST00000560521 ADPGKQ9BRR6 497 aa9.84□□□□□ -0.83
RABGGTA-217ENST00000560521 MKNK1Q9BUB5 465 aa9.84□□□□□ -0.83
RABGGTA-217ENST00000560521 EDEM2Q9BV94 578 aa9.84□□□□□ -0.83
RABGGTA-217ENST00000560521 CCDC113Q9H0I3 377 aa9.84□□□□□ -0.83
RABGGTA-217ENST00000560521 SLITRK6Q9H5Y7 841 aa9.84□□□□□ -0.83
RABGGTA-217ENST00000560521 ASAH2Q9NR71 780 aa9.84□□□□□ -0.83
RABGGTA-217ENST00000560521 POLR3BQ9NW08 1133 aaPredicted RBP9.84□□□□□ -0.83
RABGGTA-217ENST00000560521 TSC2P49815 1807 aa9.84□□□□□ -0.83
RABGGTA-217ENST00000560521 HELZP42694 1942 aaKnown RBP9.84□□□□□ -0.83
RABGGTA-217ENST00000560521 CCDC194A0A1B0GVG4 234 aa9.83□□□□□ -0.84
RABGGTA-217ENST00000560521 A0A1W2PRU2 124 aa9.83□□□□□ -0.84
RABGGTA-217ENST00000560521 H7C4K7 107 aa9.83□□□□□ -0.84
RABGGTA-217ENST00000560521 SYN3O14994 580 aa9.83□□□□□ -0.84
RABGGTA-217ENST00000560521 VNN2O95498 520 aa9.83□□□□□ -0.84
RABGGTA-217ENST00000560521 XRCC6P12956 609 aaKnown RBP eCLIP9.83□□□□□ -0.84
RABGGTA-217ENST00000560521 CEACAM1P13688 526 aa9.83□□□□□ -0.84
RABGGTA-217ENST00000560521 RPS6KB1P23443 525 aa9.83□□□□□ -0.84
RABGGTA-217ENST00000560521 CACNB1Q02641 598 aaPredicted RBP9.83□□□□□ -0.84
RABGGTA-217ENST00000560521 TNK2Q07912 1038 aa9.83□□□□□ -0.84
RABGGTA-217ENST00000560521 TMEM132AQ24JP5 1023 aa9.83□□□□□ -0.84
RABGGTA-217ENST00000560521 CTXN3Q4LDR2 81 aa9.83□□□□□ -0.84
RABGGTA-217ENST00000560521 ARHGAP29Q52LW3 1261 aa9.83□□□□□ -0.84
RABGGTA-217ENST00000560521 XKR4Q5GH76 650 aa9.83□□□□□ -0.84
RABGGTA-217ENST00000560521 NT5DC1Q5TFE4 455 aa9.83□□□□□ -0.84
RABGGTA-217ENST00000560521 DAB2IPQ5VWQ8 1189 aa9.83□□□□□ -0.84
RABGGTA-217ENST00000560521 ALKAL1Q6UXT8 129 aa9.83□□□□□ -0.84
RABGGTA-217ENST00000560521 RNF19BQ6ZMZ0 732 aa9.83□□□□□ -0.84
RABGGTA-217ENST00000560521 TMC8Q8IU68 726 aa9.83□□□□□ -0.84
RABGGTA-217ENST00000560521 SLFN12Q8IYM2 578 aa9.83□□□□□ -0.84
RABGGTA-217ENST00000560521 FAM200AQ8TCP9 573 aa9.83□□□□□ -0.84
RABGGTA-217ENST00000560521 ZCCHC14Q8WYQ9 949 aaKnown RBP9.83□□□□□ -0.84
RABGGTA-217ENST00000560521 ZMAT2Q96NC0 199 aaKnown RBP9.83□□□□□ -0.84
RABGGTA-217ENST00000560521 AFF4Q9UHB7 1163 aaKnown RBP9.83□□□□□ -0.84
RABGGTA-217ENST00000560521 SNX14Q9Y5W7 946 aa9.83□□□□□ -0.84
RABGGTA-217ENST00000560521 CACNA1EQ15878 2313 aa9.83□□□□□ -0.84
RABGGTA-217ENST00000560521 SMG1Q96Q15 3661 aaKnown RBP9.82□□□□□ -0.84
RABGGTA-217ENST00000560521 LNP1A1A4G5 178 aa9.82□□□□□ -0.84
RABGGTA-217ENST00000560521 BCLAF3A2AJT9 711 aaKnown RBP9.82□□□□□ -0.84
RABGGTA-217ENST00000560521 PODXLO00592 558 aa9.82□□□□□ -0.84
RABGGTA-217ENST00000560521 CDX4O14627 284 aaPredicted RBP9.82□□□□□ -0.84
RABGGTA-217ENST00000560521 DCLK1O15075 740 aa9.82□□□□□ -0.84
RABGGTA-217ENST00000560521 BAG4O95429 457 aaKnown RBP9.82□□□□□ -0.84
RABGGTA-217ENST00000560521 CAVIN2O95810 425 aa9.82□□□□□ -0.84
RABGGTA-217ENST00000560521 LIG1P18858 919 aa9.82□□□□□ -0.84
RABGGTA-217ENST00000560521 ATP2B1P20020 1258 aa9.82□□□□□ -0.84
RABGGTA-217ENST00000560521 CSRP1P21291 193 aaKnown RBP9.82□□□□□ -0.84
RABGGTA-217ENST00000560521 CREB5Q02930 508 aa9.82□□□□□ -0.84
RABGGTA-217ENST00000560521 MAPK6Q16659 721 aa9.82□□□□□ -0.84
RABGGTA-217ENST00000560521 DCAF4L1Q3SXM0 396 aa9.82□□□□□ -0.84
RABGGTA-217ENST00000560521 TMEM196Q5HYL7 178 aa9.82□□□□□ -0.84
RABGGTA-217ENST00000560521 FSTL4Q6MZW2 842 aa9.82□□□□□ -0.84
RABGGTA-217ENST00000560521 PIK3AP1Q6ZUJ8 805 aa9.82□□□□□ -0.84
RABGGTA-217ENST00000560521 FAM177A1Q8N128 213 aaPredicted RBP9.82□□□□□ -0.84
RABGGTA-217ENST00000560521 CAMKK1Q8N5S9 505 aa9.82□□□□□ -0.84
RABGGTA-217ENST00000560521 CEP120Q8N960 986 aa9.82□□□□□ -0.84
RABGGTA-217ENST00000560521 BEST2Q8NFU1 509 aa9.82□□□□□ -0.84
RABGGTA-217ENST00000560521 OXER1Q8TDS5 423 aa9.82□□□□□ -0.84
RABGGTA-217ENST00000560521 DDX12PQ92771 950 aa9.82□□□□□ -0.84
RABGGTA-217ENST00000560521 CHFRQ96EP1 664 aa9.82□□□□□ -0.84
RABGGTA-217ENST00000560521 CCDC43Q96MW1 224 aaKnown RBP9.82□□□□□ -0.84
RABGGTA-217ENST00000560521 TMEM209Q96SK2 561 aa9.82□□□□□ -0.84
RABGGTA-217ENST00000560521 DNAJC25Q9H1X3 360 aa9.82□□□□□ -0.84
RABGGTA-217ENST00000560521 C2orf40Q9H1Z8 148 aa9.82□□□□□ -0.84
RABGGTA-217ENST00000560521 CRISPLD1Q9H336 500 aa9.82□□□□□ -0.84
RABGGTA-217ENST00000560521 GJB4Q9NTQ9 266 aa9.82□□□□□ -0.84
RABGGTA-217ENST00000560521 MAFFQ9ULX9 164 aa9.82□□□□□ -0.84
RABGGTA-217ENST00000560521 PCDHA12Q9UN75 941 aa9.82□□□□□ -0.84
RABGGTA-217ENST00000560521 SLC8A2Q9UPR5 921 aa9.82□□□□□ -0.84
RABGGTA-217ENST00000560521 LOC400499M0QZD8 3231 aa9.82□□□□□ -0.84
RABGGTA-217ENST00000560521 FAM205CA6NFA0 338 aa9.81□□□□□ -0.84
RABGGTA-217ENST00000560521 ATG13O75143 517 aa9.81□□□□□ -0.84
RABGGTA-217ENST00000560521 SPATA31C1P0DKV0 1188 aa9.81□□□□□ -0.84
RABGGTA-217ENST00000560521 TOB2Q14106 344 aaPredicted RBP9.81□□□□□ -0.84
RABGGTA-217ENST00000560521 ZNF280DQ6N043 979 aa9.81□□□□□ -0.84
RABGGTA-217ENST00000560521 GAREM2Q75VX8 874 aa9.81□□□□□ -0.84
RABGGTA-217ENST00000560521 MCPH1Q8NEM0 835 aa9.81□□□□□ -0.84
RABGGTA-217ENST00000560521 SUSD3Q96L08 255 aa9.81□□□□□ -0.84
RABGGTA-217ENST00000560521 NAP1L4Q99733 375 aaKnown RBP9.81□□□□□ -0.84
RABGGTA-217ENST00000560521 TTC12Q9H892 705 aaPredicted RBP9.81□□□□□ -0.84
RABGGTA-217ENST00000560521 POLD4Q9HCU8 107 aa9.81□□□□□ -0.84
RABGGTA-217ENST00000560521 OBP2AQ9NY56 170 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms