RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 TMEM60Q9H2L4 133 aa18.2■□□□□ 0.5
HERC1-207ENST00000560316 TOPORSQ9NS56 1045 aaPredicted RBP18.2■□□□□ 0.5
HERC1-207ENST00000560316 PDRG1Q9NUG6 133 aa18.2■□□□□ 0.5
HERC1-207ENST00000560316 SLC38A7Q9NVC3 462 aa18.2■□□□□ 0.5
HERC1-207ENST00000560316 GTSE1Q9NYZ3 720 aa18.2■□□□□ 0.5
HERC1-207ENST00000560316 ORC3Q9UBD5 711 aaPredicted RBP18.2■□□□□ 0.5
HERC1-207ENST00000560316 ARHGEF35A5YM69 484 aa18.19■□□□□ 0.5
HERC1-207ENST00000560316 EXTL3O43909 919 aa18.19■□□□□ 0.5
HERC1-207ENST00000560316 REC8O95072 547 aa18.19■□□□□ 0.5
HERC1-207ENST00000560316 EPN2O95208 641 aa18.19■□□□□ 0.5
HERC1-207ENST00000560316 CTDNEP1O95476 244 aa18.19■□□□□ 0.5
HERC1-207ENST00000560316 HOXB3P14651 431 aaPredicted RBP18.19■□□□□ 0.5
HERC1-207ENST00000560316 CPB1P15086 417 aa18.19■□□□□ 0.5
HERC1-207ENST00000560316 EFNA5P52803 228 aa18.19■□□□□ 0.5
HERC1-207ENST00000560316 CCINQ13939 588 aa18.19■□□□□ 0.5
HERC1-207ENST00000560316 PPP2R5AQ15172 486 aa18.19■□□□□ 0.5
HERC1-207ENST00000560316 PKN3Q6P5Z2 889 aa18.19■□□□□ 0.5
HERC1-207ENST00000560316 APBB1IPQ7Z5R6 666 aaPredicted RBP18.19■□□□□ 0.5
HERC1-207ENST00000560316 RALGPS2Q86X27 583 aaPredicted RBP18.19■□□□□ 0.5
HERC1-207ENST00000560316 ARID3BQ8IVW6 561 aaPredicted RBP18.19■□□□□ 0.5
HERC1-207ENST00000560316 SUSD3Q96L08 255 aa18.19■□□□□ 0.5
HERC1-207ENST00000560316 CCDC94Q9BW85 323 aaPredicted RBP18.19■□□□□ 0.5
HERC1-207ENST00000560316 LRRC3Q9BY71 257 aa18.19■□□□□ 0.5
HERC1-207ENST00000560316 GPR88Q9GZN0 384 aa18.19■□□□□ 0.5
HERC1-207ENST00000560316 CDT1Q9H211 546 aa18.19■□□□□ 0.5
HERC1-207ENST00000560316 TNFSF13BQ9Y275 285 aa18.19■□□□□ 0.5
HERC1-207ENST00000560316 YIPF1Q9Y548 306 aa18.19■□□□□ 0.5
HERC1-207ENST00000560316 C1QTNF9BB2RNN3 333 aa18.18■□□□□ 0.5
HERC1-207ENST00000560316 RPP40O75818 363 aaKnown RBP18.18■□□□□ 0.5
HERC1-207ENST00000560316 VNN2O95498 520 aa18.18■□□□□ 0.5
HERC1-207ENST00000560316 C1QTNF9P0C862 333 aa18.18■□□□□ 0.5
HERC1-207ENST00000560316 MCM4P33991 863 aa18.18■□□□□ 0.5
HERC1-207ENST00000560316 RAP1GAPP47736 663 aa18.18■□□□□ 0.5
HERC1-207ENST00000560316 CACNA2D4Q7Z3S7 1137 aa18.18■□□□□ 0.5
HERC1-207ENST00000560316 TMC8Q8IU68 726 aa18.18■□□□□ 0.5
HERC1-207ENST00000560316 GAB3Q8WWW8 586 aa18.18■□□□□ 0.5
HERC1-207ENST00000560316 DDX12PQ92771 950 aa18.18■□□□□ 0.5
HERC1-207ENST00000560316 LOXL4Q96JB6 756 aa18.18■□□□□ 0.5
HERC1-207ENST00000560316 IFT74Q96LB3 600 aa18.18■□□□□ 0.5
HERC1-207ENST00000560316 TBC1D32Q96NH3 1257 aa18.18■□□□□ 0.5
HERC1-207ENST00000560316 POLR3CQ9BUI4 534 aaPredicted RBP18.18■□□□□ 0.5
HERC1-207ENST00000560316 LSM14BQ9BX40 385 aaKnown RBP18.18■□□□□ 0.5
HERC1-207ENST00000560316 BRMS1Q9HCU9 246 aa18.18■□□□□ 0.5
HERC1-207ENST00000560316 MAFFQ9ULX9 164 aa18.18■□□□□ 0.5
HERC1-207ENST00000560316 BTBD18B2RXH4 712 aa18.17■□□□□ 0.5
HERC1-207ENST00000560316 K7ERI5 159 aa18.17■□□□□ 0.5
HERC1-207ENST00000560316 OR4Q2P0C623 313 aa18.17■□□□□ 0.5
HERC1-207ENST00000560316 RPL9P32969 192 aaKnown RBP18.17■□□□□ 0.5
HERC1-207ENST00000560316 TNK2Q07912 1038 aa18.17■□□□□ 0.5
HERC1-207ENST00000560316 ZNF568Q3ZCX4 644 aa18.17■□□□□ 0.5
HERC1-207ENST00000560316 PSAPL1Q6NUJ1 521 aa18.17■□□□□ 0.5
HERC1-207ENST00000560316 TMEM130Q8N3G9 435 aa18.17■□□□□ 0.5
HERC1-207ENST00000560316 APPL2Q8NEU8 664 aa18.17■□□□□ 0.5
HERC1-207ENST00000560316 PGLYRP2Q96PD5 576 aa18.17■□□□□ 0.5
HERC1-207ENST00000560316 ACO2Q99798 780 aaKnown RBP18.17■□□□□ 0.5
HERC1-207ENST00000560316 TM6SF1Q9BZW5 370 aa18.17■□□□□ 0.5
HERC1-207ENST00000560316 DNAJC25Q9H1X3 360 aa18.17■□□□□ 0.5
HERC1-207ENST00000560316 CRISPLD1Q9H336 500 aa18.17■□□□□ 0.5
HERC1-207ENST00000560316 ZMIZ1Q9ULJ6 1067 aa18.17■□□□□ 0.5
HERC1-207ENST00000560316 TPCN1Q9ULQ1 816 aa18.17■□□□□ 0.5
HERC1-207ENST00000560316 ZZEF1O43149 2961 aa18.17■□□□□ 0.5
HERC1-207ENST00000560316 SPAG17Q6Q759 2223 aa18.17■□□□□ 0.5
HERC1-207ENST00000560316 DPYSL4O14531 572 aa18.16■□□□□ 0.5
HERC1-207ENST00000560316 MEFVO15553 781 aaPredicted RBP18.16■□□□□ 0.5
HERC1-207ENST00000560316 PFKFB2O60825 505 aa18.16■□□□□ 0.5
HERC1-207ENST00000560316 CCDC192P0DO97 292 aa18.16■□□□□ 0.5
HERC1-207ENST00000560316 FDPSP14324 419 aaKnown RBP18.16■□□□□ 0.5
HERC1-207ENST00000560316 KCNE1P15382 129 aa18.16■□□□□ 0.5
HERC1-207ENST00000560316 FOSBP53539 338 aa18.16■□□□□ 0.5
HERC1-207ENST00000560316 PLA2G2CQ5R387 149 aa18.16■□□□□ 0.5
HERC1-207ENST00000560316 TCEAL6Q6IPX3 200 aa18.16■□□□□ 0.5
HERC1-207ENST00000560316 CENPQQ7L2Z9 268 aaPredicted RBP18.16■□□□□ 0.5
HERC1-207ENST00000560316 BEST2Q8NFU1 509 aa18.16■□□□□ 0.5
HERC1-207ENST00000560316 WASF1Q92558 559 aa18.16■□□□□ 0.5
HERC1-207ENST00000560316 TCEAL3Q969E4 200 aa18.16■□□□□ 0.5
HERC1-207ENST00000560316 ACAP3Q96P50 834 aa18.16■□□□□ 0.5
HERC1-207ENST00000560316 MKNK1Q9BUB5 465 aa18.16■□□□□ 0.5
HERC1-207ENST00000560316 PTPRHQ9HD43 1115 aa18.16■□□□□ 0.5
HERC1-207ENST00000560316 LAMA1P25391 3075 aa18.15■□□□□ 0.5
HERC1-207ENST00000560316 MCM7P33993 719 aa18.15■□□□□ 0.5
HERC1-207ENST00000560316 MPLP40238 635 aa18.15■□□□□ 0.5
HERC1-207ENST00000560316 DUSP4Q13115 394 aa18.15■□□□□ 0.5
HERC1-207ENST00000560316 ARHGAP29Q52LW3 1261 aa18.15■□□□□ 0.5
HERC1-207ENST00000560316 RNF43Q68DV7 783 aa18.15■□□□□ 0.5
HERC1-207ENST00000560316 UNQ6494/PRO21346Q6UXR6 183 aa18.15■□□□□ 0.5
HERC1-207ENST00000560316 SYNPOQ8N3V7 929 aa18.15■□□□□ 0.5
HERC1-207ENST00000560316 TARS2Q9BW92 718 aaKnown RBP18.15■□□□□ 0.5
HERC1-207ENST00000560316 CNTN3Q9P232 1028 aa18.15■□□□□ 0.5
HERC1-207ENST00000560316 PCDHB8Q9UN66 801 aa18.15■□□□□ 0.5
HERC1-207ENST00000560316 TIMM13Q9Y5L4 95 aaPredicted RBP18.15■□□□□ 0.5
HERC1-207ENST00000560316 SPEGQ15772 3267 aa18.15■□□□□ 0.5
HERC1-207ENST00000560316 CCDC169A6NNP5 214 aa18.14■□□□□ 0.49
HERC1-207ENST00000560316 GIPC1O14908 333 aa18.14■□□□□ 0.49
HERC1-207ENST00000560316 HARSP12081 509 aaKnown RBP18.14■□□□□ 0.49
HERC1-207ENST00000560316 RPA1P27694 616 aa18.14■□□□□ 0.49
HERC1-207ENST00000560316 MARCKSP29966 332 aaPredicted RBP18.14■□□□□ 0.49
HERC1-207ENST00000560316 EPHB3P54753 998 aa18.14■□□□□ 0.49
HERC1-207ENST00000560316 GAREM2Q75VX8 874 aa18.14■□□□□ 0.49
HERC1-207ENST00000560316 TAS1R3Q7RTX0 852 aa18.14■□□□□ 0.49
HERC1-207ENST00000560316 HAUS6Q7Z4H7 955 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms