RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 SNW1Q13573 536 aaKnown RBP13.31□□□□□ -0.28
SPG11-219ENST00000559822 TMEM132DQ14C87 1099 aa13.31□□□□□ -0.28
SPG11-219ENST00000559822 SLC44A4Q53GD3 710 aa13.31□□□□□ -0.28
SPG11-219ENST00000559822 PRSS36Q5K4E3 855 aa13.31□□□□□ -0.28
SPG11-219ENST00000559822 SPECC1Q5M775 1068 aa13.31□□□□□ -0.28
SPG11-219ENST00000559822 RRAGBQ5VZM2 374 aa13.31□□□□□ -0.28
SPG11-219ENST00000559822 ADALQ6DHV7 355 aa13.31□□□□□ -0.28
SPG11-219ENST00000559822 ARMCX5Q6P1M9 558 aa13.31□□□□□ -0.28
SPG11-219ENST00000559822 ZC3H14Q6PJT7 736 aaKnown RBP13.31□□□□□ -0.28
SPG11-219ENST00000559822 ST13P5Q8NFI4 369 aaPredicted RBP13.31□□□□□ -0.28
SPG11-219ENST00000559822 LRRC15Q8TF66 581 aa13.31□□□□□ -0.28
SPG11-219ENST00000559822 DNASE1L2Q92874 299 aa13.31□□□□□ -0.28
SPG11-219ENST00000559822 FAM212AQ96EL1 285 aa13.31□□□□□ -0.28
SPG11-219ENST00000559822 BCO2Q9BYV7 579 aa13.31□□□□□ -0.28
SPG11-219ENST00000559822 OSBPL6Q9BZF3 934 aa13.31□□□□□ -0.28
SPG11-219ENST00000559822 ZFP14Q9HCL3 533 aa13.31□□□□□ -0.28
SPG11-219ENST00000559822 DSEQ9UL01 958 aa13.31□□□□□ -0.28
SPG11-219ENST00000559822 EXOC7Q9UPT5 735 aa13.31□□□□□ -0.28
SPG11-219ENST00000559822 MRPS17Q9Y2R5 130 aaKnown RBP13.31□□□□□ -0.28
SPG11-219ENST00000559822 C2CD2Q9Y426 696 aa13.31□□□□□ -0.28
SPG11-219ENST00000559822 SRPRBQ9Y5M8 271 aaKnown RBP13.31□□□□□ -0.28
SPG11-219ENST00000559822 NCAM2O15394 837 aa13.3□□□□□ -0.28
SPG11-219ENST00000559822 GAP43P17677 238 aa13.3□□□□□ -0.28
SPG11-219ENST00000559822 SYT1P21579 422 aa13.3□□□□□ -0.28
SPG11-219ENST00000559822 EPHB3P54753 998 aa13.3□□□□□ -0.28
SPG11-219ENST00000559822 EPHA5P54756 1037 aa13.3□□□□□ -0.28
SPG11-219ENST00000559822 GPR17Q13304 367 aa13.3□□□□□ -0.28
SPG11-219ENST00000559822 MYBPC2Q14324 1141 aa13.3□□□□□ -0.28
SPG11-219ENST00000559822 POSTNQ15063 836 aa13.3□□□□□ -0.28
SPG11-219ENST00000559822 PTPAQ15257 358 aa13.3□□□□□ -0.28
SPG11-219ENST00000559822 ZBTB41Q5SVQ8 909 aa13.3□□□□□ -0.28
SPG11-219ENST00000559822 OVOS1Q6IE37 1185 aa13.3□□□□□ -0.28
SPG11-219ENST00000559822 JADE1Q6IE81 842 aa13.3□□□□□ -0.28
SPG11-219ENST00000559822 SLC39A4Q6P5W5 647 aa13.3□□□□□ -0.28
SPG11-219ENST00000559822 RNF19BQ6ZMZ0 732 aa13.3□□□□□ -0.28
SPG11-219ENST00000559822 CCDC73Q6ZRK6 1079 aa13.3□□□□□ -0.28
SPG11-219ENST00000559822 SV2BQ7L1I2 683 aa13.3□□□□□ -0.28
SPG11-219ENST00000559822 ASCL5Q7RTU5 278 aa13.3□□□□□ -0.28
SPG11-219ENST00000559822 C1orf210Q8IVY1 113 aa13.3□□□□□ -0.28
SPG11-219ENST00000559822 INTS4Q96HW7 963 aaKnown RBP13.3□□□□□ -0.28
SPG11-219ENST00000559822 EPSTI1Q96J88 318 aa13.3□□□□□ -0.28
SPG11-219ENST00000559822 FIZ1Q96SL8 496 aa13.3□□□□□ -0.28
SPG11-219ENST00000559822 NELL2Q99435 816 aa13.3□□□□□ -0.28
SPG11-219ENST00000559822 DDX23Q9BUQ8 820 aaKnown RBP13.3□□□□□ -0.28
SPG11-219ENST00000559822 FOXQ1Q9C009 403 aa13.3□□□□□ -0.28
SPG11-219ENST00000559822 GPR88Q9GZN0 384 aa13.3□□□□□ -0.28
SPG11-219ENST00000559822 DLGAP2Q9P1A6 1054 aa13.3□□□□□ -0.28
SPG11-219ENST00000559822 FBXO2Q9UK22 296 aaPredicted RBP13.3□□□□□ -0.28
SPG11-219ENST00000559822 AGO2Q9UKV8 859 aaKnown RBP13.3□□□□□ -0.28
SPG11-219ENST00000559822 YIPF1Q9Y548 306 aa13.3□□□□□ -0.28
SPG11-219ENST00000559822 CLIC4Q9Y696 253 aa13.3□□□□□ -0.28
SPG11-219ENST00000559822 MORC2Q9Y6X9 1032 aaPredicted RBP13.3□□□□□ -0.28
SPG11-219ENST00000559822 MYL4P12829 197 aa13.29□□□□□ -0.28
SPG11-219ENST00000559822 ALDH1A3P47895 512 aa13.29□□□□□ -0.28
SPG11-219ENST00000559822 LILRA4P59901 499 aa13.29□□□□□ -0.28
SPG11-219ENST00000559822 RESTQ13127 1097 aa13.29□□□□□ -0.28
SPG11-219ENST00000559822 UBXN2BQ14CS0 331 aa13.29□□□□□ -0.28
SPG11-219ENST00000559822 C9orf57Q5W0N0 161 aa13.29□□□□□ -0.28
SPG11-219ENST00000559822 DYMQ7RTS9 669 aa13.29□□□□□ -0.28
SPG11-219ENST00000559822 ZNF720Q7Z2F6 126 aa13.29□□□□□ -0.28
SPG11-219ENST00000559822 METTL23Q86XA0 190 aa13.29□□□□□ -0.28
SPG11-219ENST00000559822 SFR1Q86XK3 245 aa13.29□□□□□ -0.28
SPG11-219ENST00000559822 NT5DC4Q86YG4 428 aa13.29□□□□□ -0.28
SPG11-219ENST00000559822 POMGNT1Q8WZA1 660 aa13.29□□□□□ -0.28
SPG11-219ENST00000559822 SMARCD2Q92925 531 aa13.29□□□□□ -0.28
SPG11-219ENST00000559822 IRF7Q92985 503 aa13.29□□□□□ -0.28
SPG11-219ENST00000559822 TCEAL4Q96EI5 215 aa13.29□□□□□ -0.28
SPG11-219ENST00000559822 ASB16Q96NS5 453 aa13.29□□□□□ -0.28
SPG11-219ENST00000559822 ZSCAN16Q9H4T2 348 aaPredicted RBP13.29□□□□□ -0.28
SPG11-219ENST00000559822 MRPL44Q9H9J2 332 aaKnown RBP13.29□□□□□ -0.28
SPG11-219ENST00000559822 CEP72Q9P209 647 aa13.29□□□□□ -0.28
SPG11-219ENST00000559822 HSFX1Q9UBD0 423 aa13.29□□□□□ -0.28
SPG11-219ENST00000559822 ASB3Q9Y575 518 aa13.29□□□□□ -0.28
SPG11-219ENST00000559822 TIMM13Q9Y5L4 95 aaPredicted RBP13.29□□□□□ -0.28
SPG11-219ENST00000559822 STYXL1Q9Y6J8 313 aa13.29□□□□□ -0.28
SPG11-219ENST00000559822 MIA3Q5JRA6 1907 aa13.29□□□□□ -0.28
SPG11-219ENST00000559822 ANKRD63C9JTQ0 380 aa13.28□□□□□ -0.28
SPG11-219ENST00000559822 IL18RAPO95256 599 aa13.28□□□□□ -0.28
SPG11-219ENST00000559822 FGF19O95750 216 aa13.28□□□□□ -0.28
SPG11-219ENST00000559822 NFICP08651 508 aa13.28□□□□□ -0.28
SPG11-219ENST00000559822 ACOT2P49753 483 aa13.28□□□□□ -0.28
SPG11-219ENST00000559822 GUCY2FP51841 1108 aa13.28□□□□□ -0.28
SPG11-219ENST00000559822 ALCAMQ13740 583 aa13.28□□□□□ -0.28
SPG11-219ENST00000559822 ZC2HC1CQ53FD0 456 aaPredicted RBP13.28□□□□□ -0.28
SPG11-219ENST00000559822 FAM78AQ5JUQ0 283 aa13.28□□□□□ -0.28
SPG11-219ENST00000559822 TANGO2Q6ICL3 276 aa13.28□□□□□ -0.28
SPG11-219ENST00000559822 ZNF852Q6ZMS4 543 aa13.28□□□□□ -0.28
SPG11-219ENST00000559822 TPRG1Q6ZUI0 275 aa13.28□□□□□ -0.28
SPG11-219ENST00000559822 DEPDC1BQ8WUY9 529 aa13.28□□□□□ -0.28
SPG11-219ENST00000559822 E2F7Q96AV8 911 aa13.28□□□□□ -0.28
SPG11-219ENST00000559822 BORCS6Q96GS4 357 aa13.28□□□□□ -0.28
SPG11-219ENST00000559822 SENP8Q96LD8 212 aa13.28□□□□□ -0.28
SPG11-219ENST00000559822 PGLYRP2Q96PD5 576 aa13.28□□□□□ -0.28
SPG11-219ENST00000559822 ACCSQ96QU6 501 aa13.28□□□□□ -0.28
SPG11-219ENST00000559822 TRMT61BQ9BVS5 477 aaKnown RBP13.28□□□□□ -0.28
SPG11-219ENST00000559822 SLITRK6Q9H5Y7 841 aa13.28□□□□□ -0.28
SPG11-219ENST00000559822 BRD9Q9H8M2 597 aa13.28□□□□□ -0.28
SPG11-219ENST00000559822 LTB4R2Q9NPC1 389 aa13.28□□□□□ -0.28
SPG11-219ENST00000559822 PCDHB13Q9Y5F0 798 aa13.28□□□□□ -0.28
SPG11-219ENST00000559822 ANO9A1A5B4 782 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms