RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 NR5A1Q13285 461 aa11.82□□□□□ -0.52
TRAF3-207ENST00000559734 ZNF568Q3ZCX4 644 aa11.82□□□□□ -0.52
TRAF3-207ENST00000559734 NT5DC1Q5TFE4 455 aa11.82□□□□□ -0.52
TRAF3-207ENST00000559734 PKN3Q6P5Z2 889 aa11.82□□□□□ -0.52
TRAF3-207ENST00000559734 PADI6Q6TGC4 694 aa11.82□□□□□ -0.52
TRAF3-207ENST00000559734 RNF19BQ6ZMZ0 732 aa11.82□□□□□ -0.52
TRAF3-207ENST00000559734 RUFY3Q7L099 469 aa11.82□□□□□ -0.52
TRAF3-207ENST00000559734 ARID3BQ8IVW6 561 aaPredicted RBP11.82□□□□□ -0.52
TRAF3-207ENST00000559734 GPR88Q9GZN0 384 aa11.82□□□□□ -0.52
TRAF3-207ENST00000559734 POLD4Q9HCU8 107 aa11.82□□□□□ -0.52
TRAF3-207ENST00000559734 VPS45Q9NRW7 570 aa11.82□□□□□ -0.52
TRAF3-207ENST00000559734 SLC38A7Q9NVC3 462 aa11.82□□□□□ -0.52
TRAF3-207ENST00000559734 GREB1Q4ZG55 1949 aa11.82□□□□□ -0.52
TRAF3-207ENST00000559734 PDCD11Q14690 1871 aaKnown RBP11.81□□□□□ -0.52
TRAF3-207ENST00000559734 ARHGEF35A5YM69 484 aa11.81□□□□□ -0.52
TRAF3-207ENST00000559734 C4orf47A7E2U8 309 aa11.81□□□□□ -0.52
TRAF3-207ENST00000559734 CDKL5O76039 1030 aa11.81□□□□□ -0.52
TRAF3-207ENST00000559734 TOP3BO95985 862 aaKnown RBP11.81□□□□□ -0.52
TRAF3-207ENST00000559734 OR4Q2P0C623 313 aa11.81□□□□□ -0.52
TRAF3-207ENST00000559734 HARSP12081 509 aaKnown RBP11.81□□□□□ -0.52
TRAF3-207ENST00000559734 MARCKSP29966 332 aaPredicted RBP11.81□□□□□ -0.52
TRAF3-207ENST00000559734 HOXA6P31267 233 aa11.81□□□□□ -0.52
TRAF3-207ENST00000559734 KRT2P35908 639 aa11.81□□□□□ -0.52
TRAF3-207ENST00000559734 EPHA5P54756 1037 aa11.81□□□□□ -0.52
TRAF3-207ENST00000559734 CREB5Q02930 508 aa11.81□□□□□ -0.52
TRAF3-207ENST00000559734 TNK2Q07912 1038 aa11.81□□□□□ -0.52
TRAF3-207ENST00000559734 FCHO2Q0JRZ9 810 aa11.81□□□□□ -0.52
TRAF3-207ENST00000559734 CCINQ13939 588 aa11.81□□□□□ -0.52
TRAF3-207ENST00000559734 PPP2R5AQ15172 486 aa11.81□□□□□ -0.52
TRAF3-207ENST00000559734 ARHGAP29Q52LW3 1261 aa11.81□□□□□ -0.52
TRAF3-207ENST00000559734 PLA2G2CQ5R387 149 aa11.81□□□□□ -0.52
TRAF3-207ENST00000559734 DDX12PQ92771 950 aa11.81□□□□□ -0.52
TRAF3-207ENST00000559734 C18orf25Q96B23 403 aaPredicted RBP11.81□□□□□ -0.52
TRAF3-207ENST00000559734 ZNF274Q96GC6 653 aaPredicted RBP11.81□□□□□ -0.52
TRAF3-207ENST00000559734 IFT74Q96LB3 600 aa11.81□□□□□ -0.52
TRAF3-207ENST00000559734 ZMAT2Q96NC0 199 aaKnown RBP11.81□□□□□ -0.52
TRAF3-207ENST00000559734 HHIPQ96QV1 700 aa11.81□□□□□ -0.52
TRAF3-207ENST00000559734 ADAM33Q9BZ11 813 aa11.81□□□□□ -0.52
TRAF3-207ENST00000559734 ATXN3LQ9H3M9 355 aa11.81□□□□□ -0.52
TRAF3-207ENST00000559734 BRMS1Q9HCU9 246 aa11.81□□□□□ -0.52
TRAF3-207ENST00000559734 PCDHGA5Q9Y5G8 931 aa11.81□□□□□ -0.52
TRAF3-207ENST00000559734 MED24O75448 989 aa11.8□□□□□ -0.52
TRAF3-207ENST00000559734 XRCC6P12956 609 aaKnown RBP eCLIP11.8□□□□□ -0.52
TRAF3-207ENST00000559734 GRM5P41594 1212 aa11.8□□□□□ -0.52
TRAF3-207ENST00000559734 FOSBP53539 338 aa11.8□□□□□ -0.52
TRAF3-207ENST00000559734 EPHB3P54753 998 aa11.8□□□□□ -0.52
TRAF3-207ENST00000559734 PLD1Q13393 1074 aa11.8□□□□□ -0.52
TRAF3-207ENST00000559734 MRPL58Q14197 206 aaKnown RBP11.8□□□□□ -0.52
TRAF3-207ENST00000559734 GPR158Q5T848 1215 aa11.8□□□□□ -0.52
TRAF3-207ENST00000559734 SH3PXD2AQ5TCZ1 1133 aa11.8□□□□□ -0.52
TRAF3-207ENST00000559734 DAB2IPQ5VWQ8 1189 aa11.8□□□□□ -0.52
TRAF3-207ENST00000559734 KIAA1211LQ6NV74 962 aa11.8□□□□□ -0.52
TRAF3-207ENST00000559734 CATSPER3Q86XQ3 398 aa11.8□□□□□ -0.52
TRAF3-207ENST00000559734 TMC8Q8IU68 726 aa11.8□□□□□ -0.52
TRAF3-207ENST00000559734 SYNPOQ8N3V7 929 aa11.8□□□□□ -0.52
TRAF3-207ENST00000559734 KDF1Q8NAX2 398 aaPredicted RBP11.8□□□□□ -0.52
TRAF3-207ENST00000559734 APPL2Q8NEU8 664 aa11.8□□□□□ -0.52
TRAF3-207ENST00000559734 ZCCHC14Q8WYQ9 949 aaKnown RBP11.8□□□□□ -0.52
TRAF3-207ENST00000559734 TBC1D32Q96NH3 1257 aa11.8□□□□□ -0.52
TRAF3-207ENST00000559734 LRRC3BQ96PB8 259 aa11.8□□□□□ -0.52
TRAF3-207ENST00000559734 CDT1Q9H211 546 aa11.8□□□□□ -0.52
TRAF3-207ENST00000559734 POLR3BQ9NW08 1133 aaPredicted RBP11.8□□□□□ -0.52
TRAF3-207ENST00000559734 CYP46A1Q9Y6A2 500 aa11.8□□□□□ -0.52
TRAF3-207ENST00000559734 FAM208BQ5VWN6 2430 aa11.8□□□□□ -0.52
TRAF3-207ENST00000559734 CNOT1A5YKK6 2376 aaKnown RBP11.79□□□□□ -0.52
TRAF3-207ENST00000559734 CCDC169A6NNP5 214 aa11.79□□□□□ -0.52
TRAF3-207ENST00000559734 WNT7AO00755 349 aa11.79□□□□□ -0.52
TRAF3-207ENST00000559734 SPATA31C1P0DKV0 1188 aa11.79□□□□□ -0.52
TRAF3-207ENST00000559734 CYP11B2P19099 503 aa11.79□□□□□ -0.52
TRAF3-207ENST00000559734 GABRR2P28476 465 aa11.79□□□□□ -0.52
TRAF3-207ENST00000559734 RPL9P32969 192 aaKnown RBP11.79□□□□□ -0.52
TRAF3-207ENST00000559734 ALDH1A3P47895 512 aa11.79□□□□□ -0.52
TRAF3-207ENST00000559734 VASPP50552 380 aaPredicted RBP11.79□□□□□ -0.52
TRAF3-207ENST00000559734 EFNA5P52803 228 aa11.79□□□□□ -0.52
TRAF3-207ENST00000559734 YWHAHQ04917 246 aaPredicted RBP11.79□□□□□ -0.52
TRAF3-207ENST00000559734 SCRN1Q12765 414 aa11.79□□□□□ -0.52
TRAF3-207ENST00000559734 DUSP4Q13115 394 aa11.79□□□□□ -0.52
TRAF3-207ENST00000559734 ELF2Q15723 593 aa11.79□□□□□ -0.52
TRAF3-207ENST00000559734 PLK5Q496M5 336 aa11.79□□□□□ -0.52
TRAF3-207ENST00000559734 ARHGAP15Q53QZ3 475 aa11.79□□□□□ -0.52
TRAF3-207ENST00000559734 BPIFB1Q8TDL5 484 aa11.79□□□□□ -0.52
TRAF3-207ENST00000559734 SUSD3Q96L08 255 aa11.79□□□□□ -0.52
TRAF3-207ENST00000559734 ACAP3Q96P50 834 aa11.79□□□□□ -0.52
TRAF3-207ENST00000559734 NACC1Q96RE7 527 aa11.79□□□□□ -0.52
TRAF3-207ENST00000559734 TMEM209Q96SK2 561 aa11.79□□□□□ -0.52
TRAF3-207ENST00000559734 TCHPQ9BT92 498 aa11.79□□□□□ -0.52
TRAF3-207ENST00000559734 SMG9Q9H0W8 520 aaKnown RBP11.79□□□□□ -0.52
TRAF3-207ENST00000559734 DNAJC25Q9H1X3 360 aa11.79□□□□□ -0.52
TRAF3-207ENST00000559734 ZSWIM6Q9HCJ5 1215 aa11.79□□□□□ -0.52
TRAF3-207ENST00000559734 TUFT1Q9NNX1 390 aa11.79□□□□□ -0.52
TRAF3-207ENST00000559734 PCDHB8Q9UN66 801 aa11.79□□□□□ -0.52
TRAF3-207ENST00000559734 LHX6Q9UPM6 363 aa11.79□□□□□ -0.52
TRAF3-207ENST00000559734 TNFSF13BQ9Y275 285 aa11.79□□□□□ -0.52
TRAF3-207ENST00000559734 SLC27A5Q9Y2P5 690 aa11.79□□□□□ -0.52
TRAF3-207ENST00000559734 TIMM13Q9Y5L4 95 aaPredicted RBP11.79□□□□□ -0.52
TRAF3-207ENST00000559734 STK36Q9NRP7 1315 aa11.79□□□□□ -0.52
TRAF3-207ENST00000559734 ATRXP46100 2492 aa11.79□□□□□ -0.52
TRAF3-207ENST00000559734 SRRM3A6NNA2 597 aaPredicted RBP11.78□□□□□ -0.52
TRAF3-207ENST00000559734 K7ERI5 159 aa11.78□□□□□ -0.52
TRAF3-207ENST00000559734 DCLK1O15075 740 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms