RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 EXOC4Q96A65 974 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 C8orf76Q96K31 380 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 PPP1R10Q96QC0 940 aaKnown RBP6.39□□□□□ -1.39
USP3-212ENST00000559276 NACC1Q96RE7 527 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 DDX23Q9BUQ8 820 aaKnown RBP6.39□□□□□ -1.39
USP3-212ENST00000559276 FOXQ1Q9C009 403 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 TRIM6Q9C030 488 aaPredicted RBP6.39□□□□□ -1.39
USP3-212ENST00000559276 GOLGA2P5Q9HBQ8 144 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 PTPRHQ9HD43 1115 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 ARFGAP3Q9NP61 516 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 ARHGEF3Q9NR81 526 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 TRMT1Q9NXH9 659 aaKnown RBP6.39□□□□□ -1.39
USP3-212ENST00000559276 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.39□□□□□ -1.39
USP3-212ENST00000559276 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.39□□□□□ -1.39
USP3-212ENST00000559276 IFNKQ9P0W0 207 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 DNMT3BQ9UBC3 853 aaKnown RBP6.39□□□□□ -1.39
USP3-212ENST00000559276 DPP7Q9UHL4 492 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 FBXL21Q9UKT6 434 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 HPSEQ9Y251 543 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 MTF2Q9Y483 593 aaPredicted RBP6.39□□□□□ -1.39
USP3-212ENST00000559276 R4GN57 208 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 SF3B1O75533 1304 aaKnown RBP eCLIP6.39□□□□□ -1.397e-25■■■■■ 292.9
USP3-212ENST00000559276 RIF1Q5UIP0 2472 aaKnown RBP6.39□□□□□ -1.39
USP3-212ENST00000559276 FAM186AA6NE01 2351 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 CACNA1AO00555 2505 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 TMEM189-UBE2V1I3L0A0 370 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 I3L4J1 428 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 N4BP3O15049 544 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 CCL16O15467 120 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 TBC1D4O60343 1298 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 CUTAO60888 179 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 ERLIN1O75477 346 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 PRKCBP05771 671 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 THP07101 528 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 C8AP07357 584 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 IVLP07476 585 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 POU2F2P09086 479 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 HNRNPA1P09651 372 aaKnown RBP eCLIP6.38□□□□□ -1.39
USP3-212ENST00000559276 SP9P0CG40 484 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 FSHRP23945 695 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 TKTP29401 623 aaKnown RBP6.38□□□□□ -1.39
USP3-212ENST00000559276 HOXA9P31269 272 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 OR1D2P34982 312 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 SYKP43405 635 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 NAMPTP43490 491 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 BRCC3P46736 316 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 TOB1P50616 345 aaPredicted RBP6.38□□□□□ -1.39
USP3-212ENST00000559276 UBASH3AP57075 661 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 MAPK7Q13164 816 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 FZD5Q13467 585 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 PRPF4BQ13523 1007 aaKnown RBP6.38□□□□□ -1.39
USP3-212ENST00000559276 ARID5BQ14865 1188 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 ZNF174Q15697 407 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 IL17AQ16552 155 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 UPP1Q16831 310 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 SLC5A9Q2M3M2 681 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 ERCC6LQ2NKX8 1250 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 GLRA4Q5JXX5 417 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 SPECC1Q5M775 1068 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 AXDND1Q5T1B0 1012 aaPredicted RBP6.38□□□□□ -1.39
USP3-212ENST00000559276 TRIM65Q6PJ69 517 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 DCLRE1AQ6PJP8 1040 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 ALKAL1Q6UXT8 129 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 CEP57Q86XR8 500 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 NPAS3Q8IXF0 933 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 HACE1Q8IYU2 909 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 ZNF687Q8N1G0 1237 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 KCTD17Q8N5Z5 321 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 IQUBQ8NA54 791 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 MLKLQ8NB16 471 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 PJA1Q8NG27 643 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 GOLGA1Q92805 767 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 DDX27Q96GQ7 796 aaKnown RBP6.38□□□□□ -1.39
USP3-212ENST00000559276 ZMAT2Q96NC0 199 aaKnown RBP6.38□□□□□ -1.39
USP3-212ENST00000559276 MMTAG2Q9BU76 263 aaKnown RBP6.38□□□□□ -1.39
USP3-212ENST00000559276 PLA2G2FQ9BZM2 168 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 C2orf40Q9H1Z8 148 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 ACBD3Q9H3P7 528 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 PIDD1Q9HB75 910 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 SLC24A3Q9HC58 644 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 BRMS1Q9HCU9 246 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 MYO1AQ9UBC5 1043 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 MTRRQ9UBK8 725 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 CDH7Q9ULB5 785 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 GDAQ9Y2T3 454 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 SIT1Q9Y3P8 196 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 MRFAP1Q9Y605 127 aa6.38□□□□□ -1.39
USP3-212ENST00000559276 CACNA1IQ9P0X4 2223 aa6.37□□□□□ -1.39
USP3-212ENST00000559276 SMIM28A0A1B0GU29 152 aa6.37□□□□□ -1.39
USP3-212ENST00000559276 PP2D1A8MPX8 630 aa6.37□□□□□ -1.39
USP3-212ENST00000559276 ABLIM3O94929 683 aa6.37□□□□□ -1.39
USP3-212ENST00000559276 SERPINC1P01008 464 aa6.37□□□□□ -1.39
USP3-212ENST00000559276 OR52Z1P0C646 297 aa6.37□□□□□ -1.39
USP3-212ENST00000559276 PFKFB1P16118 471 aa6.37□□□□□ -1.39
USP3-212ENST00000559276 PROZP22891 400 aa6.37□□□□□ -1.39
USP3-212ENST00000559276 FCARP24071 287 aa6.37□□□□□ -1.39
USP3-212ENST00000559276 ERCC5P28715 1186 aaPredicted RBP6.37□□□□□ -1.39
USP3-212ENST00000559276 CASQ1P31415 396 aa6.37□□□□□ -1.39
USP3-212ENST00000559276 PLA2G4AP47712 749 aa6.37□□□□□ -1.39
USP3-212ENST00000559276 FXR2P51116 673 aaKnown RBP eCLIP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms