RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 FANCLQ9NW38 375 aa11.75□□□□□ -0.53
TPM1-217ENST00000559108 ARMCX3Q9UH62 379 aaPredicted RBP11.75□□□□□ -0.53
TPM1-217ENST00000559108 ITGA11Q9UKX5 1188 aa11.75□□□□□ -0.53
TPM1-217ENST00000559108 POLIQ9UNA4 740 aa11.75□□□□□ -0.53
TPM1-217ENST00000559108 LZTS1Q9Y250 596 aa11.75□□□□□ -0.53
TPM1-217ENST00000559108 MTCL1Q9Y4B5 1905 aaKnown RBP11.75□□□□□ -0.53
TPM1-217ENST00000559108 C2orf16Q68DN1 1984 aa11.75□□□□□ -0.53
TPM1-217ENST00000559108 BRWD1Q9NSI6 2320 aa11.75□□□□□ -0.53
TPM1-217ENST00000559108 C2CD2LO14523 706 aa11.74□□□□□ -0.53
TPM1-217ENST00000559108 PER2O15055 1255 aa11.74□□□□□ -0.53
TPM1-217ENST00000559108 LINC01565O15544 149 aa11.74□□□□□ -0.53
TPM1-217ENST00000559108 TBC1D4O60343 1298 aa11.74□□□□□ -0.53
TPM1-217ENST00000559108 GLP2RO95838 553 aa11.74□□□□□ -0.53
TPM1-217ENST00000559108 HLA-DRAP01903 254 aa11.74□□□□□ -0.53
TPM1-217ENST00000559108 TNNC2P02585 160 aa11.74□□□□□ -0.53
TPM1-217ENST00000559108 KRT19P08727 400 aa11.74□□□□□ -0.53
TPM1-217ENST00000559108 ATP1A3P13637 1013 aa11.74□□□□□ -0.53
TPM1-217ENST00000559108 ZNF18P17022 549 aa11.74□□□□□ -0.53
TPM1-217ENST00000559108 CDR1P51861 262 aa11.74□□□□□ -0.53
TPM1-217ENST00000559108 APBA1Q02410 837 aa11.74□□□□□ -0.53
TPM1-217ENST00000559108 DSG1Q02413 1049 aa11.74□□□□□ -0.53
TPM1-217ENST00000559108 UBE3AQ05086 875 aa11.74□□□□□ -0.53
TPM1-217ENST00000559108 ENPEPQ07075 957 aa11.74□□□□□ -0.53
TPM1-217ENST00000559108 HYAL1Q12794 435 aa11.74□□□□□ -0.53
TPM1-217ENST00000559108 CCDC40Q4G0X9 1142 aa11.74□□□□□ -0.53
TPM1-217ENST00000559108 TCEAL5Q5H9L2 206 aa11.74□□□□□ -0.53
TPM1-217ENST00000559108 MIIPQ5JXC2 388 aa11.74□□□□□ -0.53
TPM1-217ENST00000559108 DPY19L2P1Q6NXN4 242 aa11.74□□□□□ -0.53
TPM1-217ENST00000559108 LMO3Q8TAP4 145 aa11.74□□□□□ -0.53
TPM1-217ENST00000559108 ANKRD36BP1Q96IX9 119 aa11.74□□□□□ -0.53
TPM1-217ENST00000559108 TMEM209Q96SK2 561 aa11.74□□□□□ -0.53
TPM1-217ENST00000559108 LMAN2LQ9H0V9 348 aa11.74□□□□□ -0.53
TPM1-217ENST00000559108 CBX8Q9HC52 389 aa11.74□□□□□ -0.53
TPM1-217ENST00000559108 L1RE1Q9UN81 338 aa11.74□□□□□ -0.53
TPM1-217ENST00000559108 SF3B1O75533 1304 aaKnown RBP eCLIP11.74□□□□□ -0.53
TPM1-217ENST00000559108 KPNA7A9QM74 516 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 IKBKBO14920 756 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 TEX28O15482 410 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 XPOTO43592 962 aaKnown RBP11.73□□□□□ -0.53
TPM1-217ENST00000559108 VNN2O95498 520 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 ASS1P00966 412 aaKnown RBP11.73□□□□□ -0.53
TPM1-217ENST00000559108 CNPP09543 421 aaKnown RBP11.73□□□□□ -0.53
TPM1-217ENST00000559108 CCDC192P0DO97 292 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 KRT13P13646 458 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 IGFBP4P22692 258 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 RAP1GAPP47736 663 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 FMO5P49326 533 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 GLUD2P49448 558 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 TAF6P49848 677 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 MXI1P50539 228 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 RBP5P82980 135 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 MYL5Q02045 173 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 BIRC3Q13489 604 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 NCOA4Q13772 614 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 KCNC3Q14003 757 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 MRPL58Q14197 206 aaKnown RBP11.73□□□□□ -0.53
TPM1-217ENST00000559108 SOWAHAQ2M3V2 549 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 CT47A1Q5JQC4 288 aaPredicted RBP11.73□□□□□ -0.53
TPM1-217ENST00000559108 VARS2Q5ST30 1063 aaKnown RBP11.73□□□□□ -0.53
TPM1-217ENST00000559108 TCERG1LQ5VWI1 586 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 WSCD1Q658N2 575 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.73□□□□□ -0.53
TPM1-217ENST00000559108 CEP57Q86XR8 500 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 LRRC52Q8N7C0 313 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 MRPL43Q8N983 215 aaKnown RBP11.73□□□□□ -0.53
TPM1-217ENST00000559108 OR10T2Q8NGX3 314 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 CACTINQ8WUQ7 758 aaKnown RBP11.73□□□□□ -0.53
TPM1-217ENST00000559108 KBTBD7Q8WVZ9 684 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 RIN2Q8WYP3 895 aaPredicted RBP11.73□□□□□ -0.53
TPM1-217ENST00000559108 PIK3R5Q8WYR1 880 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 DOCK6Q96HP0 2047 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 HPDLQ96IR7 371 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 LPIN3Q9BQK8 851 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 BPIFA3Q9BQP9 254 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 CLSTN3Q9BQT9 956 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 MRPL45Q9BRJ2 306 aaKnown RBP11.73□□□□□ -0.53
TPM1-217ENST00000559108 THAP9Q9H5L6 903 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 SMYD3Q9H7B4 428 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 TMEM8AQ9HCN3 771 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 PRDM6Q9NQX0 595 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 ENTPD7Q9NQZ7 604 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 DACH1Q9UI36 760 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 PCDHB8Q9UN66 801 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 NUB1Q9Y5A7 615 aa11.73□□□□□ -0.53
TPM1-217ENST00000559108 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.72□□□□□ -0.53
TPM1-217ENST00000559108 KCNJ18B7U540 433 aa11.72□□□□□ -0.53
TPM1-217ENST00000559108 CLASP2O75122 1294 aaKnown RBP11.72□□□□□ -0.53
TPM1-217ENST00000559108 CXCL14O95715 111 aa11.72□□□□□ -0.53
TPM1-217ENST00000559108 STAU1O95793 577 aaKnown RBP11.72□□□□□ -0.53
TPM1-217ENST00000559108 OR4Q2P0C623 313 aa11.72□□□□□ -0.53
TPM1-217ENST00000559108 FOSL2P15408 326 aa11.72□□□□□ -0.53
TPM1-217ENST00000559108 ASPAP45381 313 aa11.72□□□□□ -0.53
TPM1-217ENST00000559108 ZNF165P49910 485 aa11.72□□□□□ -0.53
TPM1-217ENST00000559108 CDH8P55286 799 aa11.72□□□□□ -0.53
TPM1-217ENST00000559108 KRT17Q04695 432 aa11.72□□□□□ -0.53
TPM1-217ENST00000559108 DLX2Q07687 328 aaPredicted RBP11.72□□□□□ -0.53
TPM1-217ENST00000559108 KCNH2Q12809 1159 aa11.72□□□□□ -0.53
TPM1-217ENST00000559108 KCNJ12Q14500 433 aa11.72□□□□□ -0.53
TPM1-217ENST00000559108 CCDC85BQ15834 202 aaPredicted RBP11.72□□□□□ -0.53
TPM1-217ENST00000559108 PTPN21Q16825 1174 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms