RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 YEATS4O95619 227 aa12.92□□□□□ -0.34
HERC1-202ENST00000558324 F13A1P00488 732 aa12.92□□□□□ -0.34
HERC1-202ENST00000558324 ADRB2P07550 413 aa12.92□□□□□ -0.34
HERC1-202ENST00000558324 POU2F2P09086 479 aa12.92□□□□□ -0.34
HERC1-202ENST00000558324 ZSCAN22P10073 491 aaPredicted RBP12.92□□□□□ -0.34
HERC1-202ENST00000558324 SRFP11831 508 aa12.92□□□□□ -0.34
HERC1-202ENST00000558324 ADSSP30520 456 aa12.92□□□□□ -0.34
HERC1-202ENST00000558324 AARSP49588 968 aaKnown RBP eCLIP12.92□□□□□ -0.344e-6■■■■■ 30.6
HERC1-202ENST00000558324 PKP1Q13835 747 aa12.92□□□□□ -0.34
HERC1-202ENST00000558324 C9orf57Q5W0N0 161 aa12.92□□□□□ -0.34
HERC1-202ENST00000558324 TPGS2Q68CL5 300 aa12.92□□□□□ -0.34
HERC1-202ENST00000558324 RNF19BQ6ZMZ0 732 aa12.92□□□□□ -0.34
HERC1-202ENST00000558324 CD302Q8IX05 232 aa12.92□□□□□ -0.34
HERC1-202ENST00000558324 NPAS3Q8IXF0 933 aa12.92□□□□□ -0.34
HERC1-202ENST00000558324 TCEAL8Q8IYN2 117 aa12.92□□□□□ -0.34
HERC1-202ENST00000558324 ZSWIM2Q8NEG5 633 aa12.92□□□□□ -0.34
HERC1-202ENST00000558324 GPR152Q8TDT2 470 aa12.92□□□□□ -0.34
HERC1-202ENST00000558324 HPS3Q969F9 1004 aa12.92□□□□□ -0.34
HERC1-202ENST00000558324 NXPE3Q969Y0 559 aa12.92□□□□□ -0.34
HERC1-202ENST00000558324 MCRS1Q96EZ8 462 aa12.92□□□□□ -0.34
HERC1-202ENST00000558324 TSPAN18Q96SJ8 248 aa12.92□□□□□ -0.34
HERC1-202ENST00000558324 KXD1Q9BQD3 176 aa12.92□□□□□ -0.34
HERC1-202ENST00000558324 FAM213AQ9BRX8 229 aa12.92□□□□□ -0.34
HERC1-202ENST00000558324 STRA6Q9BX79 667 aa12.92□□□□□ -0.34
HERC1-202ENST00000558324 OLFML3Q9NRN5 406 aa12.92□□□□□ -0.34
HERC1-202ENST00000558324 AFF4Q9UHB7 1163 aaKnown RBP12.92□□□□□ -0.34
HERC1-202ENST00000558324 STYXL1Q9Y6J8 313 aa12.92□□□□□ -0.34
HERC1-202ENST00000558324 ZFP37Q9Y6Q3 630 aaPredicted RBP12.92□□□□□ -0.34
HERC1-202ENST00000558324 MUC6Q6W4X9 2439 aa12.92□□□□□ -0.34
HERC1-202ENST00000558324 WDFY4Q6ZS81 3184 aa12.91□□□□□ -0.34
HERC1-202ENST00000558324 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.91□□□□□ -0.34
HERC1-202ENST00000558324 FRMD3A2A2Y4 597 aa12.91□□□□□ -0.34
HERC1-202ENST00000558324 KRBA1A5PL33 1030 aa12.91□□□□□ -0.34
HERC1-202ENST00000558324 GOLGA8IPA6NC78 632 aa12.91□□□□□ -0.34
HERC1-202ENST00000558324 GOLGA8JA6NMD2 632 aa12.91□□□□□ -0.34
HERC1-202ENST00000558324 H0Y858 1186 aa12.91□□□□□ -0.34
HERC1-202ENST00000558324 CUTAO60888 179 aa12.91□□□□□ -0.34
HERC1-202ENST00000558324 PRPF6O94906 941 aaKnown RBP12.91□□□□□ -0.34
HERC1-202ENST00000558324 ODC1P11926 461 aa12.91□□□□□ -0.34
HERC1-202ENST00000558324 NPR3P17342 541 aa12.91□□□□□ -0.34
HERC1-202ENST00000558324 CEBPBP17676 345 aa12.91□□□□□ -0.34
HERC1-202ENST00000558324 PTPN2P17706 415 aa12.91□□□□□ -0.34
HERC1-202ENST00000558324 MRE11P49959 708 aa12.91□□□□□ -0.34
HERC1-202ENST00000558324 CDR1P51861 262 aa12.91□□□□□ -0.34
HERC1-202ENST00000558324 LILRA4P59901 499 aa12.91□□□□□ -0.34
HERC1-202ENST00000558324 TWF1Q12792 350 aa12.91□□□□□ -0.34
HERC1-202ENST00000558324 POSTNQ15063 836 aa12.91□□□□□ -0.34
HERC1-202ENST00000558324 OVOS1Q6IE37 1185 aa12.91□□□□□ -0.34
HERC1-202ENST00000558324 SHC4Q6S5L8 630 aa12.91□□□□□ -0.34
HERC1-202ENST00000558324 CRELD2Q6UXH1 353 aaPredicted RBP12.91□□□□□ -0.34
HERC1-202ENST00000558324 MTSS1LQ765P7 747 aa12.91□□□□□ -0.34
HERC1-202ENST00000558324 RTL10Q7L3V2 364 aa12.91□□□□□ -0.34
HERC1-202ENST00000558324 CCDC65Q8IXS2 484 aa12.91□□□□□ -0.34
HERC1-202ENST00000558324 EFCAB13Q8IY85 973 aa12.91□□□□□ -0.34
HERC1-202ENST00000558324 GLIS3Q8NEA6 775 aa12.91□□□□□ -0.34
HERC1-202ENST00000558324 SENP8Q96LD8 212 aa12.91□□□□□ -0.34
HERC1-202ENST00000558324 ASB7Q9H672 318 aa12.91□□□□□ -0.34
HERC1-202ENST00000558324 DPP3Q9NY33 737 aa12.91□□□□□ -0.34
HERC1-202ENST00000558324 KCNH3Q9ULD8 1083 aa12.91□□□□□ -0.34
HERC1-202ENST00000558324 DERAQ9Y315 318 aa12.91□□□□□ -0.34
HERC1-202ENST00000558324 C2CD2Q9Y426 696 aa12.91□□□□□ -0.34
HERC1-202ENST00000558324 PCDHB13Q9Y5F0 798 aa12.91□□□□□ -0.34
HERC1-202ENST00000558324 ANO9A1A5B4 782 aa12.9□□□□□ -0.34
HERC1-202ENST00000558324 PIRO00625 290 aa12.9□□□□□ -0.34
HERC1-202ENST00000558324 GALR2O43603 387 aaPredicted RBP12.9□□□□□ -0.34
HERC1-202ENST00000558324 PI15O43692 258 aa12.9□□□□□ -0.34
HERC1-202ENST00000558324 OAZ2O95190 189 aa12.9□□□□□ -0.34
HERC1-202ENST00000558324 AOC1P19801 751 aa12.9□□□□□ -0.34
HERC1-202ENST00000558324 TYMPP19971 482 aa12.9□□□□□ -0.34
HERC1-202ENST00000558324 CLCN5P51795 746 aa12.9□□□□□ -0.34
HERC1-202ENST00000558324 WNT7BP56706 349 aa12.9□□□□□ -0.34
HERC1-202ENST00000558324 ASIC1P78348 528 aa12.9□□□□□ -0.34
HERC1-202ENST00000558324 TFAMQ00059 246 aaKnown RBP12.9□□□□□ -0.34
HERC1-202ENST00000558324 E2F4Q16254 413 aa12.9□□□□□ -0.34
HERC1-202ENST00000558324 PDZD4Q76G19 769 aaPredicted RBP12.9□□□□□ -0.34
HERC1-202ENST00000558324 HS6ST3Q8IZP7 471 aa12.9□□□□□ -0.34
HERC1-202ENST00000558324 ELMOD1Q8N336 334 aa12.9□□□□□ -0.34
HERC1-202ENST00000558324 ATOH1Q92858 354 aaPredicted RBP12.9□□□□□ -0.34
HERC1-202ENST00000558324 TCEAL4Q96EI5 215 aa12.9□□□□□ -0.34
HERC1-202ENST00000558324 FAM84AQ96KN4 292 aa12.9□□□□□ -0.34
HERC1-202ENST00000558324 TMEM209Q96SK2 561 aa12.9□□□□□ -0.34
HERC1-202ENST00000558324 PYM1Q9BRP8 204 aaKnown RBP12.9□□□□□ -0.34
HERC1-202ENST00000558324 CBWD1Q9BRT8 395 aa12.9□□□□□ -0.34
HERC1-202ENST00000558324 TNMDQ9H2S6 317 aa12.9□□□□□ -0.34
HERC1-202ENST00000558324 PCIF1Q9H4Z3 704 aa12.9□□□□□ -0.34
HERC1-202ENST00000558324 TBC1D17Q9HA65 648 aa12.9□□□□□ -0.34
HERC1-202ENST00000558324 ARHGEF3Q9NR81 526 aa12.9□□□□□ -0.34
HERC1-202ENST00000558324 RBAKQ9NYW8 714 aaPredicted RBP12.9□□□□□ -0.34
HERC1-202ENST00000558324 WNT16Q9UBV4 365 aa12.9□□□□□ -0.34
HERC1-202ENST00000558324 YIPF1Q9Y548 306 aa12.9□□□□□ -0.34
HERC1-202ENST00000558324 DOCK8Q8NF50 2099 aa12.9□□□□□ -0.34
HERC1-202ENST00000558324 OR6C75A6NL08 312 aa12.89□□□□□ -0.35
HERC1-202ENST00000558324 NRG2O14511 850 aaPredicted RBP12.89□□□□□ -0.35
HERC1-202ENST00000558324 IL18RAPO95256 599 aa12.89□□□□□ -0.35
HERC1-202ENST00000558324 VNN2O95498 520 aa12.89□□□□□ -0.35
HERC1-202ENST00000558324 MYL4P12829 197 aa12.89□□□□□ -0.35
HERC1-202ENST00000558324 GJA1P17302 382 aa12.89□□□□□ -0.35
HERC1-202ENST00000558324 ME1P48163 572 aa12.89□□□□□ -0.35
HERC1-202ENST00000558324 TAF6P49848 677 aa12.89□□□□□ -0.35
HERC1-202ENST00000558324 GPC5P78333 572 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms