RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 ATAT1Q5SQI0 421 aa9.69□□□□□ -0.86
SPG11-207ENST00000558138 OVOS1Q6IE37 1185 aa9.69□□□□□ -0.86
SPG11-207ENST00000558138 KLHL10Q6JEL2 608 aa9.69□□□□□ -0.86
SPG11-207ENST00000558138 TMC5Q6UXY8 1006 aa9.69□□□□□ -0.86
SPG11-207ENST00000558138 WDR49Q8IV35 697 aa9.69□□□□□ -0.86
SPG11-207ENST00000558138 C12orf56Q8IXR9 622 aa9.69□□□□□ -0.86
SPG11-207ENST00000558138 THEM5Q8N1Q8 247 aa9.69□□□□□ -0.86
SPG11-207ENST00000558138 GUF1Q8N442 669 aaKnown RBP9.69□□□□□ -0.86
SPG11-207ENST00000558138 C12orf76Q8N812 135 aaPredicted RBP9.69□□□□□ -0.86
SPG11-207ENST00000558138 KREMEN2Q8NCW0 462 aa9.69□□□□□ -0.86
SPG11-207ENST00000558138 LNX1Q8TBB1 728 aaPredicted RBP9.69□□□□□ -0.86
SPG11-207ENST00000558138 SENP8Q96LD8 212 aa9.69□□□□□ -0.86
SPG11-207ENST00000558138 RIPOR3Q96MK2 946 aa9.69□□□□□ -0.86
SPG11-207ENST00000558138 POP1Q99575 1024 aaKnown RBP9.69□□□□□ -0.86
SPG11-207ENST00000558138 CGRRF1Q99675 332 aa9.69□□□□□ -0.86
SPG11-207ENST00000558138 MMRN2Q9H8L6 949 aa9.69□□□□□ -0.86
SPG11-207ENST00000558138 RXFP1Q9HBX9 757 aa9.69□□□□□ -0.86
SPG11-207ENST00000558138 TCF20Q9UGU0 1960 aaKnown RBP9.69□□□□□ -0.86
SPG11-207ENST00000558138 DSEQ9UL01 958 aa9.69□□□□□ -0.86
SPG11-207ENST00000558138 EYSQ5T1H1 3165 aa9.69□□□□□ -0.86
SPG11-207ENST00000558138 ANK1P16157 1881 aa9.68□□□□□ -0.86
SPG11-207ENST00000558138 GRXCR2A6NFK2 248 aa9.68□□□□□ -0.86
SPG11-207ENST00000558138 PRRG1O14668 218 aa9.68□□□□□ -0.86
SPG11-207ENST00000558138 CETN3O15182 167 aa9.68□□□□□ -0.86
SPG11-207ENST00000558138 HUS1O60921 280 aa9.68□□□□□ -0.86
SPG11-207ENST00000558138 LILRB3O75022 631 aa9.68□□□□□ -0.86
SPG11-207ENST00000558138 WEE2P0C1S8 567 aa9.68□□□□□ -0.86
SPG11-207ENST00000558138 EPB41P11171 864 aaKnown RBP9.68□□□□□ -0.86
SPG11-207ENST00000558138 PPP1R2P41236 205 aa9.68□□□□□ -0.86
SPG11-207ENST00000558138 MTHFRP42898 656 aa9.68□□□□□ -0.86
SPG11-207ENST00000558138 WNT7BP56706 349 aa9.68□□□□□ -0.86
SPG11-207ENST00000558138 LILRA4P59901 499 aa9.68□□□□□ -0.86
SPG11-207ENST00000558138 TNNC1P63316 161 aa9.68□□□□□ -0.86
SPG11-207ENST00000558138 ITIH3Q06033 890 aa9.68□□□□□ -0.86
SPG11-207ENST00000558138 ADAM9Q13443 819 aa9.68□□□□□ -0.86
SPG11-207ENST00000558138 CBX2Q14781 532 aaPredicted RBP9.68□□□□□ -0.86
SPG11-207ENST00000558138 COL19A1Q14993 1142 aa9.68□□□□□ -0.86
SPG11-207ENST00000558138 PSMD6Q15008 389 aa9.68□□□□□ -0.86
SPG11-207ENST00000558138 GPR65Q8IYL9 337 aa9.68□□□□□ -0.86
SPG11-207ENST00000558138 C1orf127Q8N9H9 656 aa9.68□□□□□ -0.86
SPG11-207ENST00000558138 SMRP1Q8NCR6 262 aa9.68□□□□□ -0.86
SPG11-207ENST00000558138 SLC22A17Q8WUG5 538 aa9.68□□□□□ -0.86
SPG11-207ENST00000558138 MSLNLQ96KJ4 702 aa9.68□□□□□ -0.86
SPG11-207ENST00000558138 RPGRIP1Q96KN7 1286 aa9.68□□□□□ -0.86
SPG11-207ENST00000558138 NECAB3Q96P71 396 aaPredicted RBP9.68□□□□□ -0.86
SPG11-207ENST00000558138 MMS19Q96T76 1030 aa9.68□□□□□ -0.86
SPG11-207ENST00000558138 KCTD10Q9H3F6 313 aa9.68□□□□□ -0.86
SPG11-207ENST00000558138 PLEKHA4Q9H4M7 779 aa9.68□□□□□ -0.86
SPG11-207ENST00000558138 INTS13Q9NVM9 706 aa9.68□□□□□ -0.86
SPG11-207ENST00000558138 MTRRQ9UBK8 725 aa9.68□□□□□ -0.86
SPG11-207ENST00000558138 FBXL5Q9UKA1 691 aa9.68□□□□□ -0.86
SPG11-207ENST00000558138 MAN1B1Q9UKM7 699 aa9.68□□□□□ -0.86
SPG11-207ENST00000558138 BACE2Q9Y5Z0 518 aa9.68□□□□□ -0.86
SPG11-207ENST00000558138 VWA8A3KMH1 1905 aa9.67□□□□□ -0.86
SPG11-207ENST00000558138 CCDC195A0A1B0GUA6 201 aa9.67□□□□□ -0.86
SPG11-207ENST00000558138 KPNA7A9QM74 516 aa9.67□□□□□ -0.86
SPG11-207ENST00000558138 DLL1O00548 723 aa9.67□□□□□ -0.86
SPG11-207ENST00000558138 PIRO00625 290 aa9.67□□□□□ -0.86
SPG11-207ENST00000558138 XYLBO75191 536 aa9.67□□□□□ -0.86
SPG11-207ENST00000558138 LRG1P02750 347 aa9.67□□□□□ -0.86
SPG11-207ENST00000558138 C8AP07357 584 aa9.67□□□□□ -0.86
SPG11-207ENST00000558138 BMP1P13497 986 aa9.67□□□□□ -0.86
SPG11-207ENST00000558138 PSMC2P35998 433 aaKnown RBP9.67□□□□□ -0.86
SPG11-207ENST00000558138 PRCPP42785 496 aa9.67□□□□□ -0.86
SPG11-207ENST00000558138 CASP4P49662 377 aa9.67□□□□□ -0.86
SPG11-207ENST00000558138 DCAF17Q5H9S7 520 aaPredicted RBP9.67□□□□□ -0.86
SPG11-207ENST00000558138 SYCE2Q6PIF2 218 aa9.67□□□□□ -0.86
SPG11-207ENST00000558138 CD300LGQ6UXG3 332 aa9.67□□□□□ -0.86
SPG11-207ENST00000558138 TMEM184AQ6ZMB5 413 aa9.67□□□□□ -0.86
SPG11-207ENST00000558138 CCDC149Q6ZUS6 474 aa9.67□□□□□ -0.86
SPG11-207ENST00000558138 FAM186BQ8IYM0 893 aa9.67□□□□□ -0.86
SPG11-207ENST00000558138 ELMOD1Q8N336 334 aa9.67□□□□□ -0.86
SPG11-207ENST00000558138 LRRC52Q8N7C0 313 aa9.67□□□□□ -0.86
SPG11-207ENST00000558138 CCDC150Q8NCX0 1101 aa9.67□□□□□ -0.86
SPG11-207ENST00000558138 OR5B17Q8NGF7 314 aa9.67□□□□□ -0.86
SPG11-207ENST00000558138 SLC7A14Q8TBB6 771 aa9.67□□□□□ -0.86
SPG11-207ENST00000558138 SMG7Q92540 1137 aaKnown RBP9.67□□□□□ -0.86
SPG11-207ENST00000558138 HPDLQ96IR7 371 aa9.67□□□□□ -0.86
SPG11-207ENST00000558138 FAM84AQ96KN4 292 aa9.67□□□□□ -0.86
SPG11-207ENST00000558138 NECTIN4Q96NY8 510 aa9.67□□□□□ -0.86
SPG11-207ENST00000558138 PGLYRP2Q96PD5 576 aa9.67□□□□□ -0.86
SPG11-207ENST00000558138 CLSTN3Q9BQT9 956 aa9.67□□□□□ -0.86
SPG11-207ENST00000558138 NUP62CLQ9H1M0 184 aa9.67□□□□□ -0.86
SPG11-207ENST00000558138 ADAM7Q9H2U9 754 aa9.67□□□□□ -0.86
SPG11-207ENST00000558138 CYP4F11Q9HBI6 524 aa9.67□□□□□ -0.86
SPG11-207ENST00000558138 CTNND2Q9UQB3 1225 aa9.67□□□□□ -0.86
SPG11-207ENST00000558138 TRAF3IP3Q9Y228 551 aa9.67□□□□□ -0.86
SPG11-207ENST00000558138 SNX9Q9Y5X1 595 aa9.67□□□□□ -0.86
SPG11-207ENST00000558138 PLXNA3P51805 1871 aa9.67□□□□□ -0.86
SPG11-207ENST00000558138 PTPRJQ12913 1337 aa9.66□□□□□ -0.86
SPG11-207ENST00000558138 ANO9A1A5B4 782 aa9.66□□□□□ -0.86
SPG11-207ENST00000558138 BICDL2A1A5D9 508 aa9.66□□□□□ -0.86
SPG11-207ENST00000558138 OR6C75A6NL08 312 aa9.66□□□□□ -0.86
SPG11-207ENST00000558138 LRRIQ3A6PVS8 624 aaPredicted RBP9.66□□□□□ -0.86
SPG11-207ENST00000558138 M0QZQ0 153 aa9.66□□□□□ -0.86
SPG11-207ENST00000558138 SPTLC1O15269 473 aa9.66□□□□□ -0.86
SPG11-207ENST00000558138 CCL16O15467 120 aa9.66□□□□□ -0.86
SPG11-207ENST00000558138 ADAM12O43184 909 aa9.66□□□□□ -0.86
SPG11-207ENST00000558138 RFPL2O75678 378 aa9.66□□□□□ -0.86
SPG11-207ENST00000558138 EFEMP2O95967 443 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms