RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 VWA3AA6NCI4 1184 aa17.37■□□□□ 0.37
SCFD1-224ENST00000557713 MAN2B1O00754 1011 aa17.37■□□□□ 0.37
SCFD1-224ENST00000557713 LILRB5O75023 590 aa17.37■□□□□ 0.37
SCFD1-224ENST00000557713 ADRB2P07550 413 aa17.37■□□□□ 0.37
SCFD1-224ENST00000557713 CPB1P15086 417 aa17.37■□□□□ 0.37
SCFD1-224ENST00000557713 PSMC3P17980 439 aa17.37■□□□□ 0.37
SCFD1-224ENST00000557713 TNFSF9P41273 254 aa17.37■□□□□ 0.37
SCFD1-224ENST00000557713 AARSP49588 968 aaKnown RBP eCLIP17.37■□□□□ 0.37
SCFD1-224ENST00000557713 CACNB1Q02641 598 aaPredicted RBP17.37■□□□□ 0.37
SCFD1-224ENST00000557713 YWHAHQ04917 246 aaPredicted RBP17.37■□□□□ 0.37
SCFD1-224ENST00000557713 ARL6IP4Q66PJ3 421 aaKnown RBP17.37■□□□□ 0.37
SCFD1-224ENST00000557713 HAUS6Q7Z4H7 955 aa17.37■□□□□ 0.37
SCFD1-224ENST00000557713 LEMD2Q8NC56 503 aa17.37■□□□□ 0.37
SCFD1-224ENST00000557713 ATRIPQ8WXE1 791 aa17.37■□□□□ 0.37
SCFD1-224ENST00000557713 IRF7Q92985 503 aa17.37■□□□□ 0.37
SCFD1-224ENST00000557713 LRRC3Q9BY71 257 aa17.37■□□□□ 0.37
SCFD1-224ENST00000557713 OXCT2Q9BYC2 517 aaPredicted RBP17.37■□□□□ 0.37
SCFD1-224ENST00000557713 PRMT8Q9NR22 394 aaPredicted RBP17.37■□□□□ 0.37
SCFD1-224ENST00000557713 LARSQ9P2J5 1176 aaKnown RBP17.37■□□□□ 0.37
SCFD1-224ENST00000557713 UBQLN1Q9UMX0 589 aaKnown RBP17.37■□□□□ 0.37
SCFD1-224ENST00000557713 KIF3AQ9Y496 699 aa17.37■□□□□ 0.37
SCFD1-224ENST00000557713 TIMM13Q9Y5L4 95 aaPredicted RBP17.37■□□□□ 0.37
SCFD1-224ENST00000557713 OTOGLQ3ZCN5 2332 aa17.36■□□□□ 0.37
SCFD1-224ENST00000557713 CACNA1AO00555 2505 aa17.36■□□□□ 0.37
SCFD1-224ENST00000557713 LACTBL1A8MY62 500 aa17.36■□□□□ 0.37
SCFD1-224ENST00000557713 H0YCG3 227 aa17.36■□□□□ 0.37
SCFD1-224ENST00000557713 FAM189A1O60320 539 aa17.36■□□□□ 0.37
SCFD1-224ENST00000557713 MYL4P12829 197 aa17.36■□□□□ 0.37
SCFD1-224ENST00000557713 GJA1P17302 382 aa17.36■□□□□ 0.37
SCFD1-224ENST00000557713 VIPR2P41587 438 aa17.36■□□□□ 0.37
SCFD1-224ENST00000557713 MATR3P43243 847 aaKnown RBP eCLIP17.36■□□□□ 0.379e-7■■■□□ 15
SCFD1-224ENST00000557713 MTAPQ13126 283 aa17.36■□□□□ 0.37
SCFD1-224ENST00000557713 KYAT1Q16773 422 aa17.36■□□□□ 0.37
SCFD1-224ENST00000557713 C8orf34Q49A92 452 aa17.36■□□□□ 0.37
SCFD1-224ENST00000557713 TSSK4Q6SA08 328 aa17.36■□□□□ 0.37
SCFD1-224ENST00000557713 MAMSTRQ6ZN01 415 aa17.36■□□□□ 0.37
SCFD1-224ENST00000557713 KIF12Q96FN5 646 aa17.36■□□□□ 0.37
SCFD1-224ENST00000557713 CDK5RAP3Q96JB5 506 aa17.36■□□□□ 0.37
SCFD1-224ENST00000557713 ASAH2Q9NR71 780 aa17.36■□□□□ 0.37
SCFD1-224ENST00000557713 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.36■□□□□ 0.37
SCFD1-224ENST00000557713 DNAH14Q0VDD8 3507 aa17.35■□□□□ 0.37
SCFD1-224ENST00000557713 PIGRP01833 764 aa17.35■□□□□ 0.37
SCFD1-224ENST00000557713 OR4Q2P0C623 313 aa17.35■□□□□ 0.37
SCFD1-224ENST00000557713 GDI1P31150 447 aa17.35■□□□□ 0.37
SCFD1-224ENST00000557713 GPR17Q13304 367 aa17.35■□□□□ 0.37
SCFD1-224ENST00000557713 PUM1Q14671 1186 aaKnown RBP eCLIP17.35■□□□□ 0.37
SCFD1-224ENST00000557713 TEAD2Q15562 447 aa17.35■□□□□ 0.37
SCFD1-224ENST00000557713 ENOX2Q16206 610 aaKnown RBP17.35■□□□□ 0.37
SCFD1-224ENST00000557713 MFSD6LQ8IWD5 586 aa17.35■□□□□ 0.37
SCFD1-224ENST00000557713 SHKBP1Q8TBC3 707 aa17.35■□□□□ 0.37
SCFD1-224ENST00000557713 ZSCAN18Q8TBC5 510 aaPredicted RBP17.35■□□□□ 0.37
SCFD1-224ENST00000557713 LRRC15Q8TF66 581 aa17.35■□□□□ 0.37
SCFD1-224ENST00000557713 DEPDC1BQ8WUY9 529 aa17.35■□□□□ 0.37
SCFD1-224ENST00000557713 BICD1Q96G01 975 aa17.35■□□□□ 0.37
SCFD1-224ENST00000557713 TSPAN18Q96SJ8 248 aa17.35■□□□□ 0.37
SCFD1-224ENST00000557713 GPR88Q9GZN0 384 aa17.35■□□□□ 0.37
SCFD1-224ENST00000557713 EPC1Q9H2F5 836 aa17.35■□□□□ 0.37
SCFD1-224ENST00000557713 CHRDQ9H2X0 955 aa17.35■□□□□ 0.37
SCFD1-224ENST00000557713 CRISPLD1Q9H336 500 aa17.35■□□□□ 0.37
SCFD1-224ENST00000557713 DLL3Q9NYJ7 618 aa17.35■□□□□ 0.37
SCFD1-224ENST00000557713 ODF2LQ9ULJ1 636 aa17.35■□□□□ 0.37
SCFD1-224ENST00000557713 TBX20Q9UMR3 447 aa17.35■□□□□ 0.37
SCFD1-224ENST00000557713 NDRG2Q9UN36 371 aaKnown RBP17.35■□□□□ 0.37
SCFD1-224ENST00000557713 YIPF1Q9Y548 306 aa17.35■□□□□ 0.37
SCFD1-224ENST00000557713 NCANO14594 1321 aa17.35■□□□□ 0.37
SCFD1-224ENST00000557713 COL4A2P08572 1712 aa17.35■□□□□ 0.37
SCFD1-224ENST00000557713 OR6C75A6NL08 312 aa17.34■□□□□ 0.37
SCFD1-224ENST00000557713 ARNTLO00327 626 aa17.34■□□□□ 0.37
SCFD1-224ENST00000557713 SLC26A4O43511 780 aa17.34■□□□□ 0.37
SCFD1-224ENST00000557713 TDGF1P13385 188 aa17.34■□□□□ 0.37
SCFD1-224ENST00000557713 GUCY2FP51841 1108 aa17.34■□□□□ 0.37
SCFD1-224ENST00000557713 PPP2R3AQ06190 1150 aa17.34■□□□□ 0.37
SCFD1-224ENST00000557713 DUSP4Q13115 394 aa17.34■□□□□ 0.37
SCFD1-224ENST00000557713 CENPPQ6IPU0 288 aa17.34■□□□□ 0.37
SCFD1-224ENST00000557713 DSTYKQ6XUX3 929 aa17.34■□□□□ 0.37
SCFD1-224ENST00000557713 DGLUCYQ7Z3D6 616 aa17.34■□□□□ 0.37
SCFD1-224ENST00000557713 TMC8Q8IU68 726 aa17.34■□□□□ 0.37
SCFD1-224ENST00000557713 FAM3CQ92520 227 aa17.34■□□□□ 0.37
SCFD1-224ENST00000557713 AK8Q96MA6 479 aa17.34■□□□□ 0.37
SCFD1-224ENST00000557713 PGLYRP2Q96PD5 576 aa17.34■□□□□ 0.37
SCFD1-224ENST00000557713 REEP2Q9BRK0 252 aa17.34■□□□□ 0.37
SCFD1-224ENST00000557713 FAM126AQ9BYI3 521 aaPredicted RBP17.34■□□□□ 0.37
SCFD1-224ENST00000557713 DNAJC25Q9H1X3 360 aa17.34■□□□□ 0.37
SCFD1-224ENST00000557713 MYH11P35749 1972 aa17.33■□□□□ 0.37
SCFD1-224ENST00000557713 A0A0B4J269 797 aa17.33■□□□□ 0.36
SCFD1-224ENST00000557713 HEPACAM2A8MVW5 462 aa17.33■□□□□ 0.36
SCFD1-224ENST00000557713 PPEF2O14830 753 aa17.33■□□□□ 0.36
SCFD1-224ENST00000557713 ZNF263O14978 683 aa17.33■□□□□ 0.36
SCFD1-224ENST00000557713 OGTO15294 1046 aa17.33■□□□□ 0.36
SCFD1-224ENST00000557713 TYMPP19971 482 aa17.33■□□□□ 0.36
SCFD1-224ENST00000557713 SCP2P22307 547 aa17.33■□□□□ 0.36
SCFD1-224ENST00000557713 GJB2P29033 226 aa17.33■□□□□ 0.36
SCFD1-224ENST00000557713 LIG4P49917 911 aa17.33■□□□□ 0.36
SCFD1-224ENST00000557713 ZNF131P52739 623 aa17.33■□□□□ 0.36
SCFD1-224ENST00000557713 MLLT6P55198 1093 aaPredicted RBP17.33■□□□□ 0.36
SCFD1-224ENST00000557713 PLD1Q13393 1074 aa17.33■□□□□ 0.36
SCFD1-224ENST00000557713 RABEP1Q15276 862 aa17.33■□□□□ 0.36
SCFD1-224ENST00000557713 SPATA1Q5VX52 437 aa17.33■□□□□ 0.36
SCFD1-224ENST00000557713 USP37Q86T82 979 aa17.33■□□□□ 0.36
SCFD1-224ENST00000557713 E2F7Q96AV8 911 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms