RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, human

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPN1-208	ENST00000557702	FTH1P19	P0C7X4	201 aa		10.38	□□□□□ -0.75
PABPN1-208	ENST00000557702	IGFBP6	P24592	240 aa	Predicted RBP	10.38	□□□□□ -0.75
PABPN1-208	ENST00000557702	GNA11	P29992	359 aa		10.38	□□□□□ -0.75
PABPN1-208	ENST00000557702	ABCG1	P45844	678 aa		10.38	□□□□□ -0.75
PABPN1-208	ENST00000557702	QARS	P47897	775 aa	Known RBP	10.38	□□□□□ -0.75
PABPN1-208	ENST00000557702	USP11	P51784	963 aa		10.38	□□□□□ -0.75
PABPN1-208	ENST00000557702	CLCNKB	P51801	687 aa		10.38	□□□□□ -0.75
PABPN1-208	ENST00000557702	FUT2	Q10981	343 aa		10.38	□□□□□ -0.75
PABPN1-208	ENST00000557702	EMC2	Q15006	297 aa		10.38	□□□□□ -0.75
PABPN1-208	ENST00000557702	B3GNT9	Q6UX72	402 aa		10.38	□□□□□ -0.75
PABPN1-208	ENST00000557702	MTR	Q99707	1265 aa		10.38	□□□□□ -0.75
PABPN1-208	ENST00000557702	TMEM74B	Q9NUR3	256 aa		10.38	□□□□□ -0.75
PABPN1-208	ENST00000557702	AFF4	Q9UHB7	1163 aa	Known RBP	10.38	□□□□□ -0.75
PABPN1-208	ENST00000557702	APOBEC2	Q9Y235	224 aa	Known RBP	10.38	□□□□□ -0.75
PABPN1-208	ENST00000557702	ESYT2	A0FGR8	921 aa		10.37	□□□□□ -0.75
PABPN1-208	ENST00000557702		I3L4J1	428 aa		10.37	□□□□□ -0.75
PABPN1-208	ENST00000557702	ADAMTS3	O15072	1205 aa		10.37	□□□□□ -0.75
PABPN1-208	ENST00000557702	MAP3K13	O43283	966 aa		10.37	□□□□□ -0.75
PABPN1-208	ENST00000557702	RECQL4	O94761	1208 aa		10.37	□□□□□ -0.75
PABPN1-208	ENST00000557702	CD59	P13987	128 aa		10.37	□□□□□ -0.75
PABPN1-208	ENST00000557702	BRCC3	P46736	316 aa		10.37	□□□□□ -0.75
PABPN1-208	ENST00000557702	MCM2	P49736	904 aa		10.37	□□□□□ -0.75
PABPN1-208	ENST00000557702	GALK1	P51570	392 aa		10.37	□□□□□ -0.75
PABPN1-208	ENST00000557702	GFPT1	Q06210	699 aa	Predicted RBP	10.37	□□□□□ -0.75
PABPN1-208	ENST00000557702	CYP4F3	Q08477	520 aa		10.37	□□□□□ -0.75
PABPN1-208	ENST00000557702	RUNX3	Q13761	415 aa		10.37	□□□□□ -0.75
PABPN1-208	ENST00000557702	UPP1	Q16831	310 aa		10.37	□□□□□ -0.75
PABPN1-208	ENST00000557702	STXBP5	Q5T5C0	1151 aa		10.37	□□□□□ -0.75
PABPN1-208	ENST00000557702	OTUD6A	Q7L8S5	288 aa		10.37	□□□□□ -0.75
PABPN1-208	ENST00000557702	CEP76	Q8TAP6	659 aa		10.37	□□□□□ -0.75
PABPN1-208	ENST00000557702	PIP4K2C	Q8TBX8	421 aa		10.37	□□□□□ -0.75
PABPN1-208	ENST00000557702	CCDC12	Q8WUD4	166 aa	Predicted RBP	10.37	□□□□□ -0.75
PABPN1-208	ENST00000557702	UROC1	Q96N76	676 aa		10.37	□□□□□ -0.75
PABPN1-208	ENST00000557702	FBRSL1	Q9HCM7	1045 aa	Known RBP	10.37	□□□□□ -0.75
PABPN1-208	ENST00000557702	POLM	Q9NP87	494 aa	Predicted RBP	10.37	□□□□□ -0.75
PABPN1-208	ENST00000557702	GKN1	Q9NS71	199 aa		10.37	□□□□□ -0.75
PABPN1-208	ENST00000557702	FBXL5	Q9UKA1	691 aa		10.37	□□□□□ -0.75
PABPN1-208	ENST00000557702	SLC6A14	Q9UN76	642 aa		10.37	□□□□□ -0.75
PABPN1-208	ENST00000557702	STK24	Q9Y6E0	443 aa		10.37	□□□□□ -0.75
PABPN1-208	ENST00000557702	SYN3	O14994	580 aa		10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702	TBX3	O15119	743 aa		10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702	EDIL3	O43854	480 aa		10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702	WEE1	P30291	646 aa		10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702	PTGER3	P43115	390 aa		10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702	KCNC4	Q03721	635 aa		10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702	PSMD2	Q13200	908 aa		10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702	SLC14A1	Q13336	389 aa		10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702	PLD1	Q13393	1074 aa		10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702	RTN1	Q16799	776 aa		10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702	PFKFB3	Q16875	520 aa	Predicted RBP	10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702	DUOXA1	Q1HG43	343 aa		10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702		Q4G0T1	1027 aa		10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702	CTXN3	Q4LDR2	81 aa		10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702	ARHGAP15	Q53QZ3	475 aa		10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702	GPR158	Q5T848	1215 aa		10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702	LYSMD4	Q5XG99	296 aa		10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702	ANO7	Q6IWH7	933 aa		10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702	CD300LG	Q6UXG3	332 aa		10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702	TOGARAM2	Q6ZUX3	1019 aa		10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702	ARMCX6	Q7L4S7	300 aa		10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702	SGMS1	Q86VZ5	419 aa		10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702	RASSF3	Q86WH2	238 aa		10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702	TMC8	Q8IU68	726 aa		10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702	MINDY1	Q8N5J2	469 aa		10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702	BICD2	Q8TD16	824 aa		10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702	RUFY2	Q8WXA3	655 aa		10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702	CNOT6L	Q96LI5	555 aa	Known RBP	10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702	CAMK1G	Q96NX5	476 aa		10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702	P2RY13	Q9BPV8	354 aa		10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702	LRRC3	Q9BY71	257 aa		10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702	NFKBIZ	Q9BYH8	718 aa		10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702	CXCL16	Q9H2A7	254 aa		10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702	ATXN3L	Q9H3M9	355 aa		10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702	FSCN3	Q9NQT6	498 aa		10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702	USP9X	Q93008	2570 aa	Predicted RBP	10.36	□□□□□ -0.75
PABPN1-208	ENST00000557702	KNTC1	P50748	2209 aa		10.35	□□□□□ -0.75
PABPN1-208	ENST00000557702	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		10.35	□□□□□ -0.75
PABPN1-208	ENST00000557702	OTOL1	A6NHN0	477 aa	Predicted RBP	10.35	□□□□□ -0.75
PABPN1-208	ENST00000557702	SH3BP5	O60239	455 aa		10.35	□□□□□ -0.75
PABPN1-208	ENST00000557702	FGF19	O95750	216 aa		10.35	□□□□□ -0.75
PABPN1-208	ENST00000557702	P4HB	P07237	508 aa	Known RBP	10.35	□□□□□ -0.75
PABPN1-208	ENST00000557702	YWHAB	P31946	246 aa	Known RBP	10.35	□□□□□ -0.75
PABPN1-208	ENST00000557702	HOXD12	P35452	270 aa		10.35	□□□□□ -0.75
PABPN1-208	ENST00000557702	EPHB3	P54753	998 aa		10.35	□□□□□ -0.75
PABPN1-208	ENST00000557702	CYP4A11	Q02928	519 aa		10.35	□□□□□ -0.75
PABPN1-208	ENST00000557702	HDAC1	Q13547	482 aa	Predicted RBP	10.35	□□□□□ -0.75
PABPN1-208	ENST00000557702	CAPS	Q13938	189 aa		10.35	□□□□□ -0.75
PABPN1-208	ENST00000557702	MRPL58	Q14197	206 aa	Known RBP	10.35	□□□□□ -0.75
PABPN1-208	ENST00000557702	XKR9	Q5GH70	373 aa		10.35	□□□□□ -0.75
PABPN1-208	ENST00000557702	SPDYC	Q5MJ68	293 aa		10.35	□□□□□ -0.75
PABPN1-208	ENST00000557702	LMBRD2	Q68DH5	695 aa	Predicted RBP	10.35	□□□□□ -0.75
PABPN1-208	ENST00000557702	GAREM2	Q75VX8	874 aa		10.35	□□□□□ -0.75
PABPN1-208	ENST00000557702	TMEFF1	Q8IYR6	380 aa		10.35	□□□□□ -0.75
PABPN1-208	ENST00000557702	DAGLB	Q8NCG7	672 aa		10.35	□□□□□ -0.75
PABPN1-208	ENST00000557702	CCDC26	Q8TAB7	109 aa		10.35	□□□□□ -0.75
PABPN1-208	ENST00000557702	CHFR	Q96EP1	664 aa		10.35	□□□□□ -0.75
PABPN1-208	ENST00000557702	SPACA7	Q96KW9	195 aa		10.35	□□□□□ -0.75
PABPN1-208	ENST00000557702	DCBLD2	Q96PD2	775 aa		10.35	□□□□□ -0.75
PABPN1-208	ENST00000557702	FAM83C	Q9BQN1	747 aa		10.35	□□□□□ -0.75
PABPN1-208	ENST00000557702	LRRC2	Q9BYS8	371 aa		10.35	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms