RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 ELF1P32519 619 aa11.69□□□□□ -0.54
HNRNPC-230ENST00000557201 ATP2C1P98194 919 aaPredicted RBP11.69□□□□□ -0.54
HNRNPC-230ENST00000557201 ADCY1Q08828 1119 aa11.69□□□□□ -0.54
HNRNPC-230ENST00000557201 PUM1Q14671 1186 aaKnown RBP eCLIP11.69□□□□□ -0.546e-12■□□□□ 10.8
HNRNPC-230ENST00000557201 KRT79Q5XKE5 535 aa11.69□□□□□ -0.54
HNRNPC-230ENST00000557201 ARL6IP4Q66PJ3 421 aaKnown RBP11.69□□□□□ -0.54
HNRNPC-230ENST00000557201 FAM173BQ6P4H8 233 aa11.69□□□□□ -0.54
HNRNPC-230ENST00000557201 HS6ST3Q8IZP7 471 aa11.69□□□□□ -0.54
HNRNPC-230ENST00000557201 TMEM130Q8N3G9 435 aa11.69□□□□□ -0.54
HNRNPC-230ENST00000557201 DDX12PQ92771 950 aa11.69□□□□□ -0.54
HNRNPC-230ENST00000557201 ZNF396Q96N95 335 aaPredicted RBP11.69□□□□□ -0.54
HNRNPC-230ENST00000557201 TIPINQ9BVW5 301 aa11.69□□□□□ -0.54
HNRNPC-230ENST00000557201 RAB34Q9BZG1 259 aa11.69□□□□□ -0.54
HNRNPC-230ENST00000557201 HAPLN2Q9GZV7 340 aa11.69□□□□□ -0.54
HNRNPC-230ENST00000557201 EPC1Q9H2F5 836 aa11.69□□□□□ -0.54
HNRNPC-230ENST00000557201 TRPV4Q9HBA0 871 aa11.69□□□□□ -0.54
HNRNPC-230ENST00000557201 ZFP14Q9HCL3 533 aa11.69□□□□□ -0.54
HNRNPC-230ENST00000557201 PDCD11Q14690 1871 aaKnown RBP11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 M0QZQ0 153 aa11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 ARNTLO00327 626 aa11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 NCAM2O15394 837 aa11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 OAZ2O95190 189 aa11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 MAPTP10636 758 aaKnown RBP11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 PLS3P13797 630 aa11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 LRPAP1P30533 357 aa11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 NASPP49321 788 aaPredicted RBP11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 AARSP49588 968 aaKnown RBP eCLIP11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 ARPP19P56211 112 aa11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 MCL1Q07820 350 aa11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 MTAPQ13126 283 aa11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 GRM2Q14416 872 aa11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 NOLC1Q14978 699 aaKnown RBP eCLIP11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 PTPAQ15257 358 aa11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 SF3A1Q15459 793 aaKnown RBP11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 ZBTB6Q15916 424 aa11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 CTXN3Q4LDR2 81 aa11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 SEZ6Q53EL9 994 aa11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 FOXD4L5Q5VV16 416 aaPredicted RBP11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 ZNF280DQ6N043 979 aa11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 VITQ6UXI7 678 aa11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 ZPBP2Q6X784 338 aa11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 RNF19BQ6ZMZ0 732 aa11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 DGLUCYQ7Z3D6 616 aa11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 APPL2Q8NEU8 664 aa11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 FOXD4L4Q8WXT5 416 aaPredicted RBP11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 SMARCD2Q92925 531 aa11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 PNMA5Q96PV4 448 aa11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 TCHPQ9BT92 498 aa11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 LRRC3Q9BY71 257 aa11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 CHRDQ9H2X0 955 aa11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 ZNF334Q9HCZ1 680 aaPredicted RBP11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 TUBGCP4Q9UGJ1 667 aa11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 PCDHB8Q9UN66 801 aa11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 MRPS17Q9Y2R5 130 aaKnown RBP11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 NUB1Q9Y5A7 615 aa11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 CITO14578 2027 aa11.68□□□□□ -0.54
HNRNPC-230ENST00000557201 TTC26A0AVF1 554 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 FAM189A1O60320 539 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 ADRB2P07550 413 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 MCM4P33991 863 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 SLC12A3P55017 1021 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 TWF1Q12792 350 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 SLC39A14Q15043 492 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 TSSK4Q6SA08 328 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 DTHD1Q6ZMT9 781 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 PDZD4Q76G19 769 aaPredicted RBP11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 TMC8Q8IU68 726 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 KCTD17Q8N5Z5 321 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 SYT2Q8N9I0 419 aaPredicted RBP11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 ATRIPQ8WXE1 791 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 USP28Q96RU2 1077 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 HINFPQ9BQA5 517 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 TRMT61BQ9BVS5 477 aaKnown RBP11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 FAM126AQ9BYI3 521 aaPredicted RBP11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 BRD9Q9H8M2 597 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 PLEKHA5Q9HAU0 1116 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 CFAP45Q9UL16 551 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 CLIC4Q9Y696 253 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 MAN2B1O00754 1011 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 YEATS4O95619 227 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 CXCL8P10145 99 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 HARSP12081 509 aaKnown RBP11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 GJA1P17302 382 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 PSMC3P17980 439 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 VIPR2P41587 438 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 MLLT6P55198 1093 aaPredicted RBP11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 DNM1Q05193 864 aaKnown RBP11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 RAD51AP2Q09MP3 1159 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 TMEM119Q4V9L6 283 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 ARSHQ5FYA8 562 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 CYP4A22Q5TCH4 519 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 MFSD6LQ8IWD5 586 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 LEMD2Q8NC56 503 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 LINC00301Q8NCQ3 95 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 SHKBP1Q8TBC3 707 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 IRF7Q92985 503 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 RSPRY1Q96DX4 576 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 ZNF512Q96ME7 567 aaPredicted RBP11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 DNAJC25Q9H1X3 360 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 CRISPLD1Q9H336 500 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms