RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 DCLK3Q9C098 648 aa13.31□□□□□ -0.28
APEX1-216ENST00000557159 SEPT11Q9NVA2 429 aaKnown RBP13.31□□□□□ -0.28
APEX1-216ENST00000557159 ZNF70Q9UC06 446 aaPredicted RBP13.31□□□□□ -0.28
APEX1-216ENST00000557159 DNAJB4Q9UDY4 337 aa13.31□□□□□ -0.28
APEX1-216ENST00000557159 ZFP69BQ9UJL9 534 aa13.31□□□□□ -0.28
APEX1-216ENST00000557159 RABGAP1Q9Y3P9 1069 aa13.31□□□□□ -0.28
APEX1-216ENST00000557159 RBBP6Q7Z6E9 1792 aaKnown RBP13.31□□□□□ -0.28
APEX1-216ENST00000557159 CLRN2A0PK11 232 aa13.3□□□□□ -0.28
APEX1-216ENST00000557159 USP17L10C9JJH3 530 aa13.3□□□□□ -0.28
APEX1-216ENST00000557159 EML1O00423 815 aa13.3□□□□□ -0.28
APEX1-216ENST00000557159 ENTPD5O75356 428 aa13.3□□□□□ -0.28
APEX1-216ENST00000557159 SLC1A1P43005 524 aa13.3□□□□□ -0.28
APEX1-216ENST00000557159 TCP10Q12799 353 aa13.3□□□□□ -0.28
APEX1-216ENST00000557159 FKBP1CQ5VVH2 108 aa13.3□□□□□ -0.28
APEX1-216ENST00000557159 FYB2Q5VWT5 728 aa13.3□□□□□ -0.28
APEX1-216ENST00000557159 RINT1Q6NUQ1 792 aa13.3□□□□□ -0.28
APEX1-216ENST00000557159 FAM47EQ6ZV65 393 aa13.3□□□□□ -0.28
APEX1-216ENST00000557159 KCTD1Q719H9 257 aa13.3□□□□□ -0.28
APEX1-216ENST00000557159 CLNKQ7Z7G1 428 aa13.3□□□□□ -0.28
APEX1-216ENST00000557159 NOP9Q86U38 636 aaKnown RBP13.3□□□□□ -0.28
APEX1-216ENST00000557159 FAM71AQ8IYT1 594 aa13.3□□□□□ -0.28
APEX1-216ENST00000557159 RPUSD2Q8IZ73 545 aaKnown RBP13.3□□□□□ -0.28
APEX1-216ENST00000557159 ZCCHC9Q8N567 271 aaKnown RBP13.3□□□□□ -0.28
APEX1-216ENST00000557159 PPFIBP2Q8ND30 876 aa13.3□□□□□ -0.28
APEX1-216ENST00000557159 TTC8Q8TAM2 541 aa13.3□□□□□ -0.28
APEX1-216ENST00000557159 SLC20A1Q8WUM9 679 aa13.3□□□□□ -0.28
APEX1-216ENST00000557159 EZH1Q92800 747 aaPredicted RBP13.3□□□□□ -0.28
APEX1-216ENST00000557159 LENG9Q96B70 501 aa13.3□□□□□ -0.28
APEX1-216ENST00000557159 FAM81BQ96LP2 452 aa13.3□□□□□ -0.28
APEX1-216ENST00000557159 FIZ1Q96SL8 496 aa13.3□□□□□ -0.28
APEX1-216ENST00000557159 AMNQ9BXJ7 453 aa13.3□□□□□ -0.28
APEX1-216ENST00000557159 PHACTR1Q9C0D0 580 aa13.3□□□□□ -0.28
APEX1-216ENST00000557159 SYNCQ9H7C4 482 aa13.3□□□□□ -0.28
APEX1-216ENST00000557159 TUFT1Q9NNX1 390 aa13.3□□□□□ -0.28
APEX1-216ENST00000557159 AGPAT3Q9NRZ7 376 aa13.3□□□□□ -0.28
APEX1-216ENST00000557159 IL1RAPL1Q9NZN1 696 aa13.3□□□□□ -0.28
APEX1-216ENST00000557159 NOCTQ9UK39 431 aaKnown RBP13.3□□□□□ -0.28
APEX1-216ENST00000557159 PCDHA1Q9Y5I3 950 aa13.3□□□□□ -0.28
APEX1-216ENST00000557159 A0A1W2PRG0 241 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 RSPH10B2B2RC85 870 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 F8W8V4 182 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 FAM13AO94988 1023 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 IL1BP01584 269 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 RSPH10BP0C881 870 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 STAT3P40763 770 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 CACNB3P54284 484 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 DNAJC3Q13217 504 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 KRT72Q14CN4 511 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 CCDC6Q16204 474 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 CCNG2Q16589 344 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 KHDC1Q4VXA5 237 aaKnown RBP13.29□□□□□ -0.28
APEX1-216ENST00000557159 EPC2Q52LR7 807 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 EAPPQ56P03 285 aaPredicted RBP13.29□□□□□ -0.28
APEX1-216ENST00000557159 ANGEL2Q5VTE6 544 aaKnown RBP13.29□□□□□ -0.28
APEX1-216ENST00000557159 DAB2IPQ5VWQ8 1189 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 TTBK2Q6IQ55 1244 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 LRRC74BQ6ZQY2 392 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 C1orf186Q6ZWK4 172 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 MAEAQ7L5Y9 396 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 NLRP9Q7RTR0 991 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 ZNF720Q7Z2F6 126 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 C12orf56Q8IXR9 622 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 EPS8L1Q8TE68 723 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 PTCD3Q96EY7 689 aaKnown RBP13.29□□□□□ -0.28
APEX1-216ENST00000557159 EPAS1Q99814 870 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 NUP85Q9BW27 656 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 STRA6Q9BX79 667 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 PIDD1Q9HB75 910 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 PARVGQ9HBI0 331 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 SLC24A2Q9UI40 661 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 NFASCO94856 1347 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 SIPA1L1O43166 1804 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 F5H6K3 240 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 MAP3K13O43283 966 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 TYROBPO43914 113 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 PENKP01210 267 aaPredicted RBP13.29□□□□□ -0.28
APEX1-216ENST00000557159 GCAP28676 217 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 ARHGAP4P98171 946 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 KCNA1Q09470 495 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 SNX1Q13596 522 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 RCN2Q14257 317 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 ARHGAP44Q17R89 818 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 QRICH1Q2TAL8 776 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 TBC1D25Q3MII6 688 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 TAF1BQ53T94 588 aaPredicted RBP13.29□□□□□ -0.28
APEX1-216ENST00000557159 SH3BP5LQ7L8J4 393 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 SCG3Q8WXD2 468 aaKnown RBP13.29□□□□□ -0.28
APEX1-216ENST00000557159 RBM41Q96IZ5 413 aaKnown RBP13.29□□□□□ -0.28
APEX1-216ENST00000557159 SMC6Q96SB8 1091 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 MIPEPQ99797 713 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 CADM1Q9BY67 442 aaKnown RBP13.29□□□□□ -0.28
APEX1-216ENST00000557159 BHMT2Q9H2M3 363 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 VCX3BQ9H321 246 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 TRABDQ9H4I3 376 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 VCX3AQ9NNX9 186 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 GGA3Q9NZ52 723 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 VAV3Q9UKW4 847 aa13.29□□□□□ -0.28
APEX1-216ENST00000557159 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.29□□□□□ -0.28
APEX1-216ENST00000557159 TMEM110-MUSTN1A8MSY1 372 aa13.28□□□□□ -0.28
APEX1-216ENST00000557159 GSC2O15499 205 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms