RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 PFKFB3Q16875 520 aaPredicted RBP13.81□□□□□ -0.2
PSEN1-220ENST00000557037 XKR9Q5GH70 373 aa13.81□□□□□ -0.2
PSEN1-220ENST00000557037 APOA5Q6Q788 366 aa13.81□□□□□ -0.2
PSEN1-220ENST00000557037 SYT13Q7L8C5 426 aa13.81□□□□□ -0.2
PSEN1-220ENST00000557037 C11orf74Q86VG3 221 aa13.81□□□□□ -0.2
PSEN1-220ENST00000557037 IFNLR1Q8IU57 520 aaPredicted RBP13.81□□□□□ -0.2
PSEN1-220ENST00000557037 ZNF843Q8N446 348 aa13.81□□□□□ -0.2
PSEN1-220ENST00000557037 TSTD1Q8NFU3 115 aa13.81□□□□□ -0.2
PSEN1-220ENST00000557037 OR2I1PQ8NGU4 316 aa13.81□□□□□ -0.2
PSEN1-220ENST00000557037 ADAMTS14Q8WXS8 1223 aa13.81□□□□□ -0.2
PSEN1-220ENST00000557037 CHFRQ96EP1 664 aa13.81□□□□□ -0.2
PSEN1-220ENST00000557037 LRRC3Q9BY71 257 aa13.81□□□□□ -0.2
PSEN1-220ENST00000557037 SMG9Q9H0W8 520 aaKnown RBP13.81□□□□□ -0.2
PSEN1-220ENST00000557037 GOLGA2P5Q9HBQ8 144 aa13.81□□□□□ -0.2
PSEN1-220ENST00000557037 XPNPEP1Q9NQW7 623 aa13.81□□□□□ -0.2
PSEN1-220ENST00000557037 GKN1Q9NS71 199 aa13.81□□□□□ -0.2
PSEN1-220ENST00000557037 FBXL5Q9UKA1 691 aa13.81□□□□□ -0.2
PSEN1-220ENST00000557037 CIZ1Q9ULV3 898 aaPredicted RBP13.81□□□□□ -0.2
PSEN1-220ENST00000557037 RBM8AQ9Y5S9 174 aaKnown RBP13.81□□□□□ -0.2
PSEN1-220ENST00000557037 ATXN2Q99700 1313 aaKnown RBP13.81□□□□□ -0.2
PSEN1-220ENST00000557037 PTPRQQ9UMZ3 2332 aa13.8□□□□□ -0.2
PSEN1-220ENST00000557037 OTOL1A6NHN0 477 aaPredicted RBP13.8□□□□□ -0.2
PSEN1-220ENST00000557037 ZBTB39O15060 712 aa13.8□□□□□ -0.2
PSEN1-220ENST00000557037 ATXN7O15265 892 aaPredicted RBP13.8□□□□□ -0.2
PSEN1-220ENST00000557037 ARHGAP6O43182 974 aa13.8□□□□□ -0.2
PSEN1-220ENST00000557037 TDP2O95551 362 aa13.8□□□□□ -0.2
PSEN1-220ENST00000557037 FTH1P19P0C7X4 201 aa13.8□□□□□ -0.2
PSEN1-220ENST00000557037 GALK1P51570 392 aa13.8□□□□□ -0.2
PSEN1-220ENST00000557037 PSMD2Q13200 908 aa13.8□□□□□ -0.2
PSEN1-220ENST00000557037 MXD4Q14582 209 aaPredicted RBP13.8□□□□□ -0.2
PSEN1-220ENST00000557037 PTPAQ15257 358 aa13.8□□□□□ -0.2
PSEN1-220ENST00000557037 TRIP6Q15654 476 aaKnown RBP13.8□□□□□ -0.2
PSEN1-220ENST00000557037 GPR158Q5T848 1215 aa13.8□□□□□ -0.2
PSEN1-220ENST00000557037 TPGS2Q68CL5 300 aa13.8□□□□□ -0.2
PSEN1-220ENST00000557037 SGMS1Q86VZ5 419 aa13.8□□□□□ -0.2
PSEN1-220ENST00000557037 CHD1LQ86WJ1 897 aa13.8□□□□□ -0.2
PSEN1-220ENST00000557037 TTC30AQ86WT1 665 aa13.8□□□□□ -0.2
PSEN1-220ENST00000557037 TMC8Q8IU68 726 aa13.8□□□□□ -0.2
PSEN1-220ENST00000557037 NOSTRINQ8IVI9 506 aa13.8□□□□□ -0.2
PSEN1-220ENST00000557037 DAGLBQ8NCG7 672 aa13.8□□□□□ -0.2
PSEN1-220ENST00000557037 BPIFB1Q8TDL5 484 aa13.8□□□□□ -0.2
PSEN1-220ENST00000557037 BRPF3Q9ULD4 1205 aa13.8□□□□□ -0.2
PSEN1-220ENST00000557037 GDAQ9Y2T3 454 aa13.8□□□□□ -0.2
PSEN1-220ENST00000557037 PPME1Q9Y570 386 aa13.8□□□□□ -0.2
PSEN1-220ENST00000557037 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.79□□□□□ -0.2
PSEN1-220ENST00000557037 TTLL13PA6NNM8 815 aa13.79□□□□□ -0.2
PSEN1-220ENST00000557037 OPHN1O60890 802 aa13.79□□□□□ -0.2
PSEN1-220ENST00000557037 CDC27P30260 824 aa13.79□□□□□ -0.2
PSEN1-220ENST00000557037 YWHABP31946 246 aaKnown RBP13.79□□□□□ -0.2
PSEN1-220ENST00000557037 PTGER3P43115 390 aa13.79□□□□□ -0.2
PSEN1-220ENST00000557037 MCM2P49736 904 aa13.79□□□□□ -0.2
PSEN1-220ENST00000557037 USP11P51784 963 aa13.79□□□□□ -0.2
PSEN1-220ENST00000557037 CYP4F3Q08477 520 aa13.79□□□□□ -0.2
PSEN1-220ENST00000557037 UPP1Q16831 310 aa13.79□□□□□ -0.2
PSEN1-220ENST00000557037 Q4G0T1 1027 aa13.79□□□□□ -0.2
PSEN1-220ENST00000557037 CTXN3Q4LDR2 81 aa13.79□□□□□ -0.2
PSEN1-220ENST00000557037 TRIM68Q6AZZ1 485 aa13.79□□□□□ -0.2
PSEN1-220ENST00000557037 ANO7Q6IWH7 933 aa13.79□□□□□ -0.2
PSEN1-220ENST00000557037 MARCH9Q86YJ5 346 aa13.79□□□□□ -0.2
PSEN1-220ENST00000557037 SYT12Q8IV01 421 aa13.79□□□□□ -0.2
PSEN1-220ENST00000557037 TMEFF1Q8IYR6 380 aa13.79□□□□□ -0.2
PSEN1-220ENST00000557037 PIP4K2CQ8TBX8 421 aa13.79□□□□□ -0.2
PSEN1-220ENST00000557037 RUFY2Q8WXA3 655 aa13.79□□□□□ -0.2
PSEN1-220ENST00000557037 SLKQ9H2G2 1235 aaPredicted RBP13.79□□□□□ -0.2
PSEN1-220ENST00000557037 ATXN3LQ9H3M9 355 aa13.79□□□□□ -0.2
PSEN1-220ENST00000557037 EBF3Q9H4W6 596 aa13.79□□□□□ -0.2
PSEN1-220ENST00000557037 HPS4Q9NQG7 708 aa13.79□□□□□ -0.2
PSEN1-220ENST00000557037 THG1LQ9NWX6 298 aaKnown RBP13.79□□□□□ -0.2
PSEN1-220ENST00000557037 AFF4Q9UHB7 1163 aaKnown RBP13.79□□□□□ -0.2
PSEN1-220ENST00000557037 USP20Q9Y2K6 914 aa13.79□□□□□ -0.2
PSEN1-220ENST00000557037 YIPF1Q9Y548 306 aa13.79□□□□□ -0.2
PSEN1-220ENST00000557037 GOLGA8AA7E2F4 631 aa13.78□□□□□ -0.2
PSEN1-220ENST00000557037 GOLGA8BA8MQT2 603 aa13.78□□□□□ -0.2
PSEN1-220ENST00000557037 H7C4K7 107 aa13.78□□□□□ -0.2
PSEN1-220ENST00000557037 PYCARD-AS1I3L0S3 204 aa13.78□□□□□ -0.2
PSEN1-220ENST00000557037 MAP3K13O43283 966 aa13.78□□□□□ -0.2
PSEN1-220ENST00000557037 ZBTB43O43298 467 aa13.78□□□□□ -0.2
PSEN1-220ENST00000557037 SH3BP5O60239 455 aa13.78□□□□□ -0.2
PSEN1-220ENST00000557037 CD59P13987 128 aa13.78□□□□□ -0.2
PSEN1-220ENST00000557037 GNA11P29992 359 aa13.78□□□□□ -0.2
PSEN1-220ENST00000557037 RUNX3Q13761 415 aa13.78□□□□□ -0.2
PSEN1-220ENST00000557037 MAPK6Q16659 721 aa13.78□□□□□ -0.2
PSEN1-220ENST00000557037 TMEM132AQ24JP5 1023 aa13.78□□□□□ -0.2
PSEN1-220ENST00000557037 RNF19BQ6ZMZ0 732 aa13.78□□□□□ -0.2
PSEN1-220ENST00000557037 GAREM2Q75VX8 874 aa13.78□□□□□ -0.2
PSEN1-220ENST00000557037 LPCAT2Q7L5N7 544 aa13.78□□□□□ -0.2
PSEN1-220ENST00000557037 ETNPPLQ8TBG4 499 aa13.78□□□□□ -0.2
PSEN1-220ENST00000557037 RLN3Q8WXF3 142 aa13.78□□□□□ -0.2
PSEN1-220ENST00000557037 EZH1Q92800 747 aaPredicted RBP13.78□□□□□ -0.2
PSEN1-220ENST00000557037 ACDQ96AP0 544 aa13.78□□□□□ -0.2
PSEN1-220ENST00000557037 DCBLD2Q96PD2 775 aa13.78□□□□□ -0.2
PSEN1-220ENST00000557037 POLR3CQ9BUI4 534 aaPredicted RBP13.78□□□□□ -0.2
PSEN1-220ENST00000557037 PDZD7Q9H5P4 517 aa13.78□□□□□ -0.2
PSEN1-220ENST00000557037 OBP2AQ9NY56 170 aa13.78□□□□□ -0.2
PSEN1-220ENST00000557037 PCDHB9Q9Y5E1 797 aa13.78□□□□□ -0.2
PSEN1-220ENST00000557037 TRIP11Q15643 1979 aa13.78□□□□□ -0.2
PSEN1-220ENST00000557037 TNFRSF10BO14763 440 aa13.77□□□□□ -0.21
PSEN1-220ENST00000557037 DKC1O60832 514 aaKnown RBP eCLIP13.77□□□□□ -0.21
PSEN1-220ENST00000557037 ARSAP15289 507 aa13.77□□□□□ -0.21
PSEN1-220ENST00000557037 DRD1P21728 446 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms