RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 TNNC2P02585 160 aa11.54□□□□□ -0.56
LINC00239-201ENST00000556973 NR3C1P04150 777 aa11.54□□□□□ -0.56
LINC00239-201ENST00000556973 ITGB3P05106 788 aa11.54□□□□□ -0.56
LINC00239-201ENST00000556973 TMEM191BP0C7N4 346 aa11.54□□□□□ -0.56
LINC00239-201ENST00000556973 SPATA31D3P0C874 917 aa11.54□□□□□ -0.56
LINC00239-201ENST00000556973 TNNI1P19237 187 aa11.54□□□□□ -0.56
LINC00239-201ENST00000556973 RPL13P26373 211 aaKnown RBP11.54□□□□□ -0.56
LINC00239-201ENST00000556973 OR1D2P34982 312 aa11.54□□□□□ -0.56
LINC00239-201ENST00000556973 TAF6P49848 677 aa11.54□□□□□ -0.56
LINC00239-201ENST00000556973 RBP5P82980 135 aa11.54□□□□□ -0.56
LINC00239-201ENST00000556973 YWHAHQ04917 246 aaPredicted RBP11.54□□□□□ -0.56
LINC00239-201ENST00000556973 CYP24A1Q07973 514 aa11.54□□□□□ -0.56
LINC00239-201ENST00000556973 SV2CQ496J9 727 aa11.54□□□□□ -0.56
LINC00239-201ENST00000556973 SLC8B1Q6J4K2 584 aa11.54□□□□□ -0.56
LINC00239-201ENST00000556973 CYP26C1Q6V0L0 522 aa11.54□□□□□ -0.56
LINC00239-201ENST00000556973 SPATA31D4Q6ZUB0 917 aa11.54□□□□□ -0.56
LINC00239-201ENST00000556973 WDR49Q8IV35 697 aa11.54□□□□□ -0.56
LINC00239-201ENST00000556973 SENP8Q96LD8 212 aa11.54□□□□□ -0.56
LINC00239-201ENST00000556973 ZNF560Q96MR9 790 aa11.54□□□□□ -0.56
LINC00239-201ENST00000556973 COL25A1Q9BXS0 654 aaPredicted RBP11.54□□□□□ -0.56
LINC00239-201ENST00000556973 SFXN1Q9H9B4 322 aa11.54□□□□□ -0.56
LINC00239-201ENST00000556973 MAN1C1Q9NR34 630 aa11.54□□□□□ -0.56
LINC00239-201ENST00000556973 AGAP1Q9UPQ3 857 aa11.54□□□□□ -0.56
LINC00239-201ENST00000556973 FRMD4BQ9Y2L6 1034 aa11.54□□□□□ -0.56
LINC00239-201ENST00000556973 USP15Q9Y4E8 981 aaPredicted RBP11.54□□□□□ -0.56
LINC00239-201ENST00000556973 CDY1Q9Y6F8 540 aa11.54□□□□□ -0.56
LINC00239-201ENST00000556973 SCN1AP35498 2009 aa11.53□□□□□ -0.56
LINC00239-201ENST00000556973 CCDC195A0A1B0GUA6 201 aa11.53□□□□□ -0.56
LINC00239-201ENST00000556973 DLL1O00548 723 aa11.53□□□□□ -0.56
LINC00239-201ENST00000556973 PPEF2O14830 753 aa11.53□□□□□ -0.56
LINC00239-201ENST00000556973 SPTLC1O15269 473 aa11.53□□□□□ -0.56
LINC00239-201ENST00000556973 PAPLNO95428 1278 aa11.53□□□□□ -0.56
LINC00239-201ENST00000556973 KRT19P08727 400 aa11.53□□□□□ -0.56
LINC00239-201ENST00000556973 ODC1P11926 461 aa11.53□□□□□ -0.56
LINC00239-201ENST00000556973 TYMPP19971 482 aa11.53□□□□□ -0.56
LINC00239-201ENST00000556973 PPP1R2P41236 205 aa11.53□□□□□ -0.56
LINC00239-201ENST00000556973 PRCPP42785 496 aa11.53□□□□□ -0.56
LINC00239-201ENST00000556973 MTHFRP42898 656 aa11.53□□□□□ -0.56
LINC00239-201ENST00000556973 ADAM9Q13443 819 aa11.53□□□□□ -0.56
LINC00239-201ENST00000556973 UVSSAQ2YD98 709 aa11.53□□□□□ -0.56
LINC00239-201ENST00000556973 CTXN3Q4LDR2 81 aa11.53□□□□□ -0.56
LINC00239-201ENST00000556973 ATAT1Q5SQI0 421 aa11.53□□□□□ -0.56
LINC00239-201ENST00000556973 RARS2Q5T160 578 aaKnown RBP11.53□□□□□ -0.56
LINC00239-201ENST00000556973 RSPO2Q6UXX9 243 aaPredicted RBP11.53□□□□□ -0.56
LINC00239-201ENST00000556973 C15orf39Q6ZRI6 1047 aa11.53□□□□□ -0.56
LINC00239-201ENST00000556973 RTL10Q7L3V2 364 aa11.53□□□□□ -0.56
LINC00239-201ENST00000556973 USP37Q86T82 979 aa11.53□□□□□ -0.56
LINC00239-201ENST00000556973 METTL23Q86XA0 190 aa11.53□□□□□ -0.56
LINC00239-201ENST00000556973 LRRC52Q8N7C0 313 aa11.53□□□□□ -0.56
LINC00239-201ENST00000556973 C12orf76Q8N812 135 aaPredicted RBP11.53□□□□□ -0.56
LINC00239-201ENST00000556973 C1orf127Q8N9H9 656 aa11.53□□□□□ -0.56
LINC00239-201ENST00000556973 KREMEN2Q8NCW0 462 aa11.53□□□□□ -0.56
LINC00239-201ENST00000556973 CMASQ8NFW8 434 aaPredicted RBP11.53□□□□□ -0.56
LINC00239-201ENST00000556973 ZNF461Q8TAF7 563 aa11.53□□□□□ -0.56
LINC00239-201ENST00000556973 CXorf38Q8TB03 319 aa11.53□□□□□ -0.56
LINC00239-201ENST00000556973 SUSD6Q92537 303 aa11.53□□□□□ -0.56
LINC00239-201ENST00000556973 ERCC4Q92889 916 aaPredicted RBP11.53□□□□□ -0.56
LINC00239-201ENST00000556973 CCDC127Q96BQ5 260 aa11.53□□□□□ -0.56
LINC00239-201ENST00000556973 BORCS6Q96GS4 357 aa11.53□□□□□ -0.56
LINC00239-201ENST00000556973 RIPOR3Q96MK2 946 aa11.53□□□□□ -0.56
LINC00239-201ENST00000556973 NECTIN4Q96NY8 510 aa11.53□□□□□ -0.56
LINC00239-201ENST00000556973 GBP4Q96PP9 640 aa11.53□□□□□ -0.56
LINC00239-201ENST00000556973 UHRF1Q96T88 793 aaPredicted RBP11.53□□□□□ -0.56
LINC00239-201ENST00000556973 APOL5Q9BWW9 433 aa11.53□□□□□ -0.56
LINC00239-201ENST00000556973 RHOBTB2Q9BYZ6 727 aa11.53□□□□□ -0.56
LINC00239-201ENST00000556973 DSEQ9UL01 958 aa11.53□□□□□ -0.56
LINC00239-201ENST00000556973 CYB561D2O14569 222 aa11.52□□□□□ -0.57
LINC00239-201ENST00000556973 MAPK13O15264 365 aa11.52□□□□□ -0.57
LINC00239-201ENST00000556973 ADAM12O43184 909 aa11.52□□□□□ -0.57
LINC00239-201ENST00000556973 ZMYND10O75800 440 aa11.52□□□□□ -0.57
LINC00239-201ENST00000556973 ABLIM3O94929 683 aa11.52□□□□□ -0.57
LINC00239-201ENST00000556973 CYP11A1P05108 521 aa11.52□□□□□ -0.57
LINC00239-201ENST00000556973 DLATP10515 647 aaKnown RBP11.52□□□□□ -0.57
LINC00239-201ENST00000556973 NR2F2P24468 414 aa11.52□□□□□ -0.57
LINC00239-201ENST00000556973 POLR2BP30876 1174 aaKnown RBP11.52□□□□□ -0.57
LINC00239-201ENST00000556973 AP3M2P53677 418 aa11.52□□□□□ -0.57
LINC00239-201ENST00000556973 CLDN10P78369 228 aa11.52□□□□□ -0.57
LINC00239-201ENST00000556973 MYO1EQ12965 1108 aa11.52□□□□□ -0.57
LINC00239-201ENST00000556973 STIM1Q13586 685 aa11.52□□□□□ -0.57
LINC00239-201ENST00000556973 CBX2Q14781 532 aaPredicted RBP11.52□□□□□ -0.57
LINC00239-201ENST00000556973 EDRF1Q3B7T1 1238 aa11.52□□□□□ -0.57
LINC00239-201ENST00000556973 CEP135Q66GS9 1140 aa11.52□□□□□ -0.57
LINC00239-201ENST00000556973 OVOS1Q6IE37 1185 aa11.52□□□□□ -0.57
LINC00239-201ENST00000556973 CENPPQ6IPU0 288 aa11.52□□□□□ -0.57
LINC00239-201ENST00000556973 ZNF280DQ6N043 979 aa11.52□□□□□ -0.57
LINC00239-201ENST00000556973 TMC5Q6UXY8 1006 aa11.52□□□□□ -0.57
LINC00239-201ENST00000556973 TRAPPC11Q7Z392 1133 aa11.52□□□□□ -0.57
LINC00239-201ENST00000556973 GPR149Q86SP6 731 aa11.52□□□□□ -0.57
LINC00239-201ENST00000556973 ADHFE1Q8IWW8 467 aa11.52□□□□□ -0.57
LINC00239-201ENST00000556973 SMYD4Q8IYR2 804 aaPredicted RBP11.52□□□□□ -0.57
LINC00239-201ENST00000556973 OR5B17Q8NGF7 314 aa11.52□□□□□ -0.57
LINC00239-201ENST00000556973 TMC2Q8TDI7 906 aa11.52□□□□□ -0.57
LINC00239-201ENST00000556973 PARD3BQ8TEW8 1205 aa11.52□□□□□ -0.57
LINC00239-201ENST00000556973 POP1Q99575 1024 aaKnown RBP11.52□□□□□ -0.57
LINC00239-201ENST00000556973 CGRRF1Q99675 332 aa11.52□□□□□ -0.57
LINC00239-201ENST00000556973 PHF7Q9BWX1 381 aaPredicted RBP11.52□□□□□ -0.57
LINC00239-201ENST00000556973 MTMR12Q9C0I1 747 aa11.52□□□□□ -0.57
LINC00239-201ENST00000556973 ZDHHC7Q9NXF8 308 aa11.52□□□□□ -0.57
LINC00239-201ENST00000556973 FBXL5Q9UKA1 691 aa11.52□□□□□ -0.57
LINC00239-201ENST00000556973 FBXW11Q9UKB1 542 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms