RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 TMEM161BQ8NDZ6 487 aa8.39□□□□□ -1.07
HNRNPC-226ENST00000556628 NXPE3Q969Y0 559 aa8.39□□□□□ -1.07
HNRNPC-226ENST00000556628 ZBTB45Q96K62 511 aaPredicted RBP8.39□□□□□ -1.07
HNRNPC-226ENST00000556628 REEP2Q9BRK0 252 aa8.39□□□□□ -1.07
HNRNPC-226ENST00000556628 CXCL16Q9H2A7 254 aa8.39□□□□□ -1.07
HNRNPC-226ENST00000556628 KCNK12Q9HB15 430 aa8.39□□□□□ -1.07
HNRNPC-226ENST00000556628 PARVGQ9HBI0 331 aa8.39□□□□□ -1.07
HNRNPC-226ENST00000556628 CNTN3Q9P232 1028 aa8.39□□□□□ -1.07
HNRNPC-226ENST00000556628 MTRRQ9UBK8 725 aa8.39□□□□□ -1.07
HNRNPC-226ENST00000556628 FBXW11Q9UKB1 542 aa8.39□□□□□ -1.07
HNRNPC-226ENST00000556628 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.39□□□□□ -1.07
HNRNPC-226ENST00000556628 BACE2Q9Y5Z0 518 aa8.39□□□□□ -1.07
HNRNPC-226ENST00000556628 CDY1Q9Y6F8 540 aa8.39□□□□□ -1.07
HNRNPC-226ENST00000556628 TECTAO75443 2155 aa8.39□□□□□ -1.07
HNRNPC-226ENST00000556628 HNRNPDLO14979 420 aaKnown RBP8.38□□□□□ -1.07
HNRNPC-226ENST00000556628 SYN3O14994 580 aa8.38□□□□□ -1.07
HNRNPC-226ENST00000556628 TRAK2O60296 914 aa8.38□□□□□ -1.07
HNRNPC-226ENST00000556628 CLTAP09496 248 aa8.38□□□□□ -1.07
HNRNPC-226ENST00000556628 FSHRP23945 695 aa8.38□□□□□ -1.07
HNRNPC-226ENST00000556628 TKTP29401 623 aaKnown RBP8.38□□□□□ -1.07
HNRNPC-226ENST00000556628 MARCKSP29966 332 aaPredicted RBP8.38□□□□□ -1.07
HNRNPC-226ENST00000556628 HOXA9P31269 272 aa8.38□□□□□ -1.07
HNRNPC-226ENST00000556628 MCM4P33991 863 aa8.38□□□□□ -1.07
HNRNPC-226ENST00000556628 SKOR1P84550 965 aa8.38□□□□□ -1.07
HNRNPC-226ENST00000556628 PPP2R3AQ06190 1150 aa8.38□□□□□ -1.07
HNRNPC-226ENST00000556628 RAB33AQ14088 237 aa8.38□□□□□ -1.07
HNRNPC-226ENST00000556628 SEZ6Q53EL9 994 aa8.38□□□□□ -1.07
HNRNPC-226ENST00000556628 ARSHQ5FYA8 562 aa8.38□□□□□ -1.07
HNRNPC-226ENST00000556628 AXDND1Q5T1B0 1012 aaPredicted RBP8.38□□□□□ -1.07
HNRNPC-226ENST00000556628 RTL10Q7L3V2 364 aa8.38□□□□□ -1.07
HNRNPC-226ENST00000556628 GRASPQ7Z6J2 395 aaPredicted RBP8.38□□□□□ -1.07
HNRNPC-226ENST00000556628 ALYREFQ86V81 257 aaKnown RBP8.38□□□□□ -1.07
HNRNPC-226ENST00000556628 APPL2Q8NEU8 664 aa8.38□□□□□ -1.07
HNRNPC-226ENST00000556628 FLCNQ8NFG4 579 aa8.38□□□□□ -1.07
HNRNPC-226ENST00000556628 SLC7A14Q8TBB6 771 aa8.38□□□□□ -1.07
HNRNPC-226ENST00000556628 RAD54LQ92698 747 aa8.38□□□□□ -1.07
HNRNPC-226ENST00000556628 ZNF707Q96C28 371 aaPredicted RBP8.38□□□□□ -1.07
HNRNPC-226ENST00000556628 INTS4Q96HW7 963 aaKnown RBP8.38□□□□□ -1.07
HNRNPC-226ENST00000556628 ZMAT2Q96NC0 199 aaKnown RBP8.38□□□□□ -1.07
HNRNPC-226ENST00000556628 CCSER1Q9C0I3 900 aa8.38□□□□□ -1.07
HNRNPC-226ENST00000556628 ZSCAN16Q9H4T2 348 aaPredicted RBP8.38□□□□□ -1.07
HNRNPC-226ENST00000556628 PLEKHA5Q9HAU0 1116 aa8.38□□□□□ -1.07
HNRNPC-226ENST00000556628 EPS15L1Q9UBC2 864 aa8.38□□□□□ -1.07
HNRNPC-226ENST00000556628 TBX20Q9UMR3 447 aa8.38□□□□□ -1.07
HNRNPC-226ENST00000556628 DUSP12Q9UNI6 340 aa8.38□□□□□ -1.07
HNRNPC-226ENST00000556628 ZFP37Q9Y6Q3 630 aaPredicted RBP8.38□□□□□ -1.07
HNRNPC-226ENST00000556628 I3L4J1 428 aa8.37□□□□□ -1.07
HNRNPC-226ENST00000556628 K7ELQ4 463 aaPredicted RBP8.37□□□□□ -1.07
HNRNPC-226ENST00000556628 ABLIM1O14639 778 aa8.37□□□□□ -1.07
HNRNPC-226ENST00000556628 OGTO15294 1046 aa8.37□□□□□ -1.07
HNRNPC-226ENST00000556628 CCL16O15467 120 aa8.37□□□□□ -1.07
HNRNPC-226ENST00000556628 PAPLNO95428 1278 aa8.37□□□□□ -1.07
HNRNPC-226ENST00000556628 PDGFBP01127 241 aaPredicted RBP8.37□□□□□ -1.07
HNRNPC-226ENST00000556628 LRG1P02750 347 aa8.37□□□□□ -1.07
HNRNPC-226ENST00000556628 LAMP2P13473 410 aa8.37□□□□□ -1.07
HNRNPC-226ENST00000556628 SYT1P21579 422 aa8.37□□□□□ -1.07
HNRNPC-226ENST00000556628 DDIT3P35638 169 aa8.37□□□□□ -1.07
HNRNPC-226ENST00000556628 VCPP55072 806 aaKnown RBP8.37□□□□□ -1.07
HNRNPC-226ENST00000556628 ARPP19P56211 112 aa8.37□□□□□ -1.07
HNRNPC-226ENST00000556628 CEBPZQ03701 1054 aaKnown RBP8.37□□□□□ -1.07
HNRNPC-226ENST00000556628 GRIN1Q05586 938 aa8.37□□□□□ -1.07
HNRNPC-226ENST00000556628 SOX4Q06945 474 aaPredicted RBP8.37□□□□□ -1.07
HNRNPC-226ENST00000556628 BECN1Q14457 450 aa8.37□□□□□ -1.07
HNRNPC-226ENST00000556628 SLC10A6Q3KNW5 377 aa8.37□□□□□ -1.07
HNRNPC-226ENST00000556628 RRAGBQ5VZM2 374 aa8.37□□□□□ -1.07
HNRNPC-226ENST00000556628 ZNF280DQ6N043 979 aa8.37□□□□□ -1.07
HNRNPC-226ENST00000556628 SV2BQ7L1I2 683 aa8.37□□□□□ -1.07
HNRNPC-226ENST00000556628 CD302Q8IX05 232 aa8.37□□□□□ -1.07
HNRNPC-226ENST00000556628 PRSS33Q8NF86 280 aa8.37□□□□□ -1.07
HNRNPC-226ENST00000556628 FEZF2Q8TBJ5 459 aa8.37□□□□□ -1.07
HNRNPC-226ENST00000556628 LRRN4Q8WUT4 740 aa8.37□□□□□ -1.07
HNRNPC-226ENST00000556628 C18orf25Q96B23 403 aaPredicted RBP8.37□□□□□ -1.07
HNRNPC-226ENST00000556628 SUSD3Q96L08 255 aa8.37□□□□□ -1.07
HNRNPC-226ENST00000556628 MYADMQ96S97 322 aa8.37□□□□□ -1.07
HNRNPC-226ENST00000556628 TSPAN18Q96SJ8 248 aa8.37□□□□□ -1.07
HNRNPC-226ENST00000556628 SMOC2Q9H3U7 446 aa8.37□□□□□ -1.07
HNRNPC-226ENST00000556628 RPF1Q9H9Y2 349 aaKnown RBP8.37□□□□□ -1.07
HNRNPC-226ENST00000556628 BLOC1S4Q9NUP1 217 aa8.37□□□□□ -1.07
HNRNPC-226ENST00000556628 UBQLN1Q9UMX0 589 aaKnown RBP8.37□□□□□ -1.07
HNRNPC-226ENST00000556628 SRPRBQ9Y5M8 271 aaKnown RBP8.37□□□□□ -1.07
HNRNPC-226ENST00000556628 CLIC4Q9Y696 253 aa8.37□□□□□ -1.07
HNRNPC-226ENST00000556628 C5orf42Q9H799 3197 aa8.36□□□□□ -1.07
HNRNPC-226ENST00000556628 PRRG1O14668 218 aa8.36□□□□□ -1.07
HNRNPC-226ENST00000556628 ADAM12O43184 909 aa8.36□□□□□ -1.07
HNRNPC-226ENST00000556628 N4BP1O75113 896 aaKnown RBP8.36□□□□□ -1.07
HNRNPC-226ENST00000556628 PIGRP01833 764 aa8.36□□□□□ -1.07
HNRNPC-226ENST00000556628 HSP90AA1P07900 732 aaKnown RBP8.36□□□□□ -1.07
HNRNPC-226ENST00000556628 POU2F2P09086 479 aa8.36□□□□□ -1.07
HNRNPC-226ENST00000556628 CXCL8P10145 99 aa8.36□□□□□ -1.07
HNRNPC-226ENST00000556628 SRFP11831 508 aa8.36□□□□□ -1.07
HNRNPC-226ENST00000556628 CPB1P15086 417 aa8.36□□□□□ -1.07
HNRNPC-226ENST00000556628 CYP3A5P20815 502 aa8.36□□□□□ -1.07
HNRNPC-226ENST00000556628 MRE11P49959 708 aa8.36□□□□□ -1.07
HNRNPC-226ENST00000556628 CLCN5P51795 746 aa8.36□□□□□ -1.07
HNRNPC-226ENST00000556628 ZNF131P52739 623 aa8.36□□□□□ -1.07
HNRNPC-226ENST00000556628 ROR1Q01973 937 aa8.36□□□□□ -1.07
HNRNPC-226ENST00000556628 RESTQ13127 1097 aa8.36□□□□□ -1.07
HNRNPC-226ENST00000556628 CTXN3Q4LDR2 81 aa8.36□□□□□ -1.07
HNRNPC-226ENST00000556628 SPECC1Q5M775 1068 aa8.36□□□□□ -1.07
HNRNPC-226ENST00000556628 LCE2CQ5TA81 110 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms