RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 FAM47E-STBD1D6RA91 191 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 E7ENQ6 273 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 CACNB4O00305 520 aaPredicted RBP6.58□□□□□ -1.36
TDP1-215ENST00000556498 IGF2BP3O00425 579 aaKnown RBP eCLIP6.58□□□□□ -1.36
TDP1-215ENST00000556498 POLR2DO15514 142 aaKnown RBP6.58□□□□□ -1.36
TDP1-215ENST00000556498 PLOD3O60568 738 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 USP1O94782 785 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 TGDSO95455 350 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 DDX58O95786 925 aaKnown RBP6.58□□□□□ -1.36
TDP1-215ENST00000556498 DLGAP3O95886 979 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 CD4P01730 458 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 RETP07949 1114 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 PRKAR1AP10644 381 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 PDGFRAP16234 1089 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 HOXC12P31275 282 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 ADCY8P40145 1251 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 RAD52P43351 418 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 ATP5OP48047 213 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 KCNJ6P48051 423 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 SULT1E1P49888 294 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 HAND2P61296 217 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 ACY1Q03154 408 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 PTPN11Q06124 597 aaPredicted RBP6.58□□□□□ -1.36
TDP1-215ENST00000556498 DHX34Q14147 1143 aaKnown RBP6.58□□□□□ -1.36
TDP1-215ENST00000556498 UBE3CQ15386 1083 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 DUOXA2Q1HG44 320 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 WSCD2Q2TBF2 565 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 KLHL38Q2WGJ6 581 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 ODF2Q5BJF6 829 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 PRRT3Q5FWE3 981 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 KCNT1Q5JUK3 1230 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 KANK2Q63ZY3 851 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 METTL2BQ6P1Q9 378 aaKnown RBP6.58□□□□□ -1.36
TDP1-215ENST00000556498 SLC4A10Q6U841 1118 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 C6orf89Q6UWU4 347 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 AKAP14Q86UN6 197 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 KCNH5Q8NCM2 988 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 ZNF540Q8NDQ6 660 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 OR6C4Q8NGE1 309 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 CDC26Q8NHZ8 85 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 JPH3Q8WXH2 748 aaPredicted RBP6.58□□□□□ -1.36
TDP1-215ENST00000556498 CIDECQ96AQ7 238 aaPredicted RBP6.58□□□□□ -1.36
TDP1-215ENST00000556498 SIKE1Q9BRV8 207 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 KATNAL1Q9BW62 490 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 LMAN2LQ9H0V9 348 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 MMRN2Q9H8L6 949 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 INIPQ9NRY2 104 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 DDX18Q9NVP1 670 aaKnown RBP6.58□□□□□ -1.36
TDP1-215ENST00000556498 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.58□□□□□ -1.36
TDP1-215ENST00000556498 GMIPQ9P107 970 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 LARSQ9P2J5 1176 aaKnown RBP6.58□□□□□ -1.36
TDP1-215ENST00000556498 ASIC3Q9UHC3 531 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 PYCARDQ9ULZ3 195 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 INPP5FQ9Y2H2 1132 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 STON1Q9Y6Q2 735 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 NUMBLQ9Y6R0 609 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 GRIN2BQ13224 1484 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 INSRP06213 1382 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 THOC2Q8NI27 1593 aaKnown RBP6.57□□□□□ -1.36
TDP1-215ENST00000556498 ZNF536O15090 1300 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 TTC41PQ6P2S7 1318 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.57□□□□□ -1.36
TDP1-215ENST00000556498 C1orf232A0A0U1RR37 186 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 MAGEB16A2A368 324 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 FAM221AA4D161 298 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 TSPY2A6NKD2 308 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 HGSO14964 777 aaPredicted RBP6.57□□□□□ -1.36
TDP1-215ENST00000556498 KATNA1O75449 491 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 BAG3O95817 575 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 LMNAP02545 664 aaKnown RBP6.57□□□□□ -1.36
TDP1-215ENST00000556498 KRT1P04264 644 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 S100A9P06702 114 aaKnown RBP6.57□□□□□ -1.36
TDP1-215ENST00000556498 TSPY3P0CV98 308 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 TSPY8P0CW00 308 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 ATF6P18850 670 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 PPP2R1AP30153 589 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 RXRGP48443 463 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 RGS7P49802 495 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 VCPP55072 806 aaKnown RBP6.57□□□□□ -1.36
TDP1-215ENST00000556498 TMPRSS15P98073 1019 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 TSPY1Q01534 308 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 TSC22D1Q15714 1073 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 NFIL3Q16649 462 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 MYLK3Q32MK0 819 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 LEXMQ3ZCV2 418 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 IGSF11Q5DX21 431 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 HABP4Q5JVS0 413 aaKnown RBP6.57□□□□□ -1.36
TDP1-215ENST00000556498 EXOSC6Q5RKV6 272 aaKnown RBP6.57□□□□□ -1.36
TDP1-215ENST00000556498 SNAP47Q5SQN1 464 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 HP1BP3Q5SSJ5 553 aaPredicted RBP6.57□□□□□ -1.36
TDP1-215ENST00000556498 FAM180BQ6P0A1 224 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 POMZP3Q6PJE2 187 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 B3GNT6Q6ZMB0 384 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 BNC2Q6ZN30 1099 aaPredicted RBP6.57□□□□□ -1.36
TDP1-215ENST00000556498 MFSD6Q6ZSS7 791 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 LPCAT2Q7L5N7 544 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 ADCK1Q86TW2 530 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 GATAD2AQ86YP4 633 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 SCUBE1Q8IWY4 988 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 SYTL1Q8IYJ3 562 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms