RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 CENPCQ03188 943 aa8.85□□□□□ -0.99
LINC00641-201ENST00000555379 NCOA4Q13772 614 aa8.85□□□□□ -0.99
LINC00641-201ENST00000555379 PTPROQ16827 1216 aa8.85□□□□□ -0.99
LINC00641-201ENST00000555379 EFCAB12Q6NXP0 572 aa8.85□□□□□ -0.99
LINC00641-201ENST00000555379 DSG4Q86SJ6 1040 aa8.85□□□□□ -0.99
LINC00641-201ENST00000555379 SKAP1Q86WV1 359 aa8.85□□□□□ -0.99
LINC00641-201ENST00000555379 UNC45BQ8IWX7 931 aa8.85□□□□□ -0.99
LINC00641-201ENST00000555379 SYT2Q8N9I0 419 aaPredicted RBP8.85□□□□□ -0.99
LINC00641-201ENST00000555379 ULK4Q96C45 1275 aa8.85□□□□□ -0.99
LINC00641-201ENST00000555379 SENP7Q9BQF6 1050 aa8.85□□□□□ -0.99
LINC00641-201ENST00000555379 TRIM9Q9C026 710 aa8.85□□□□□ -0.99
LINC00641-201ENST00000555379 FBXO44Q9H4M3 255 aa8.85□□□□□ -0.99
LINC00641-201ENST00000555379 ASB7Q9H672 318 aa8.85□□□□□ -0.99
LINC00641-201ENST00000555379 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.85□□□□□ -0.99
LINC00641-201ENST00000555379 AGAP1Q9UPQ3 857 aa8.85□□□□□ -0.99
LINC00641-201ENST00000555379 DCTN3O75935 186 aa8.85□□□□□ -0.99
LINC00641-201ENST00000555379 CHGBP05060 677 aa8.85□□□□□ -0.99
LINC00641-201ENST00000555379 HIST1H2AGP0C0S8 130 aaPredicted RBP8.85□□□□□ -0.99
LINC00641-201ENST00000555379 VDRP11473 427 aa8.85□□□□□ -0.99
LINC00641-201ENST00000555379 HIST1H2ADP20671 130 aa8.85□□□□□ -0.99
LINC00641-201ENST00000555379 NFIAQ12857 509 aa8.85□□□□□ -0.99
LINC00641-201ENST00000555379 SNX1Q13596 522 aa8.85□□□□□ -0.99
LINC00641-201ENST00000555379 FAM102AQ5T9C2 384 aaPredicted RBP8.85□□□□□ -0.99
LINC00641-201ENST00000555379 CCDC149Q6ZUS6 474 aa8.85□□□□□ -0.99
LINC00641-201ENST00000555379 FMR1NBQ8N0W7 255 aaPredicted RBP8.85□□□□□ -0.99
LINC00641-201ENST00000555379 TMEM199Q8N511 208 aa8.85□□□□□ -0.99
LINC00641-201ENST00000555379 ATP8B4Q8TF62 1192 aa8.85□□□□□ -0.99
LINC00641-201ENST00000555379 HIST1H2AHQ96KK5 128 aa8.85□□□□□ -0.99
LINC00641-201ENST00000555379 COQ7Q99807 217 aa8.85□□□□□ -0.99
LINC00641-201ENST00000555379 HIST1H2AJQ99878 128 aa8.85□□□□□ -0.99
LINC00641-201ENST00000555379 AGPAT1Q99943 283 aa8.85□□□□□ -0.99
LINC00641-201ENST00000555379 NAT9Q9BTE0 207 aa8.85□□□□□ -0.99
LINC00641-201ENST00000555379 H2AFJQ9BTM1 129 aa8.85□□□□□ -0.99
LINC00641-201ENST00000555379 SPATC1LQ9H0A9 340 aa8.85□□□□□ -0.99
LINC00641-201ENST00000555379 C10orf88Q9H8K7 445 aa8.85□□□□□ -0.99
LINC00641-201ENST00000555379 ZMYM5Q9UJ78 669 aa8.85□□□□□ -0.99
LINC00641-201ENST00000555379 GSTA4O15217 222 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 ERBB2P04626 1255 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 VIL1P09327 827 aaKnown RBP8.84□□□□□ -0.99
LINC00641-201ENST00000555379 CXCL9Q07325 125 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 PTK6Q13882 451 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 NAIF1Q69YI7 327 aaPredicted RBP8.84□□□□□ -0.99
LINC00641-201ENST00000555379 ARHGAP22Q7Z5H3 698 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 TMEM86AQ8N2M4 240 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 UBR1Q8IWV7 1749 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 NVLO15381 856 aaKnown RBP8.84□□□□□ -0.99
LINC00641-201ENST00000555379 PSMA3P25788 255 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 FDFT1P37268 417 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 SERPINB4P48594 390 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 SLC45A4Q5BKX6 768 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 ARMC6Q6NXE6 501 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 ZPBP2Q6X784 338 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 PRUNE1Q86TP1 453 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 RIOX2Q8IUF8 465 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 CRLF3Q8IUI8 442 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 PARP9Q8IXQ6 854 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 RIBC1Q8N443 379 aaPredicted RBP8.84□□□□□ -0.99
LINC00641-201ENST00000555379 ATPAF2Q8N5M1 289 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 ARL8AQ96BM9 186 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 ATG4CQ96DT6 458 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 C1QTNF7Q9BXJ2 289 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 SLC25A13Q9UJS0 675 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 ACTR2P61160 394 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 NAA20P61599 178 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 MED21Q13503 144 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 ITGA9Q13797 1035 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 DRAP1Q14919 205 aaPredicted RBP8.84□□□□□ -0.99
LINC00641-201ENST00000555379 ZNF827Q17R98 1081 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 DPCR1Q3MIW9 517 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 NUDCD3Q8IVD9 361 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 PDZD8Q8NEN9 1154 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 RTFDC1Q9BY42 306 aaPredicted RBP8.84□□□□□ -0.99
LINC00641-201ENST00000555379 TRPM5Q9NZQ8 1165 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 PAK5Q9P286 719 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 TUBE1Q9UJT0 475 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 CAPN11Q9UMQ6 739 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 SLC4A7Q9Y6M7 1214 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 GTPBP10A4D1E9 387 aaKnown RBP8.84□□□□□ -0.99
LINC00641-201ENST00000555379 HGSO14964 777 aaPredicted RBP8.84□□□□□ -0.99
LINC00641-201ENST00000555379 CTIFO43310 598 aaKnown RBP8.84□□□□□ -0.99
LINC00641-201ENST00000555379 MAP4P27816 1152 aaKnown RBP8.84□□□□□ -0.99
LINC00641-201ENST00000555379 GCLMP48507 274 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 ARL4DP49703 201 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 SKP1P63208 163 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 SPARCL1Q14515 664 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 PDIA6Q15084 440 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 WDR49Q8IV35 697 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 CCDC197Q8NCU1 140 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 KCNB2Q92953 911 aa8.84□□□□□ -0.99
LINC00641-201ENST00000555379 POTEFA5A3E0 1075 aa8.83□□□□□ -1
LINC00641-201ENST00000555379 TOM1L1O75674 476 aa8.83□□□□□ -1
LINC00641-201ENST00000555379 POTEIP0CG38 1075 aa8.83□□□□□ -1
LINC00641-201ENST00000555379 ZBTB48P10074 688 aaPredicted RBP8.83□□□□□ -1
LINC00641-201ENST00000555379 CYP2C18P33260 490 aa8.83□□□□□ -1
LINC00641-201ENST00000555379 HERVK_113P62684 666 aa8.83□□□□□ -1
LINC00641-201ENST00000555379 GUCY2DQ02846 1103 aa8.83□□□□□ -1
LINC00641-201ENST00000555379 PDK2Q15119 407 aa8.83□□□□□ -1
LINC00641-201ENST00000555379 PABPC1LQ4VXU2 614 aaKnown RBP8.83□□□□□ -1
LINC00641-201ENST00000555379 NAPEPLDQ6IQ20 393 aa8.83□□□□□ -1
LINC00641-201ENST00000555379 POTEGQ6S5H5 508 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms