RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 KRT19P08727 400 aa13.65□□□□□ -0.22
SYNE2-219ENST00000555323 CDK11BP21127 795 aaKnown RBP13.65□□□□□ -0.22
SYNE2-219ENST00000555323 BRCC3P46736 316 aa13.65□□□□□ -0.22
SYNE2-219ENST00000555323 MYL6P60660 151 aa13.65□□□□□ -0.22
SYNE2-219ENST00000555323 MYO1EQ12965 1108 aa13.65□□□□□ -0.22
SYNE2-219ENST00000555323 BIRC3Q13489 604 aa13.65□□□□□ -0.22
SYNE2-219ENST00000555323 GPM6BQ13491 265 aa13.65□□□□□ -0.22
SYNE2-219ENST00000555323 TRPC3Q13507 836 aa13.65□□□□□ -0.22
SYNE2-219ENST00000555323 CAMK1Q14012 370 aa13.65□□□□□ -0.22
SYNE2-219ENST00000555323 KRT31Q15323 416 aa13.65□□□□□ -0.22
SYNE2-219ENST00000555323 SV2CQ496J9 727 aa13.65□□□□□ -0.22
SYNE2-219ENST00000555323 HSP90AA4PQ58FG1 418 aa13.65□□□□□ -0.22
SYNE2-219ENST00000555323 DPH6Q7L8W6 267 aa13.65□□□□□ -0.22
SYNE2-219ENST00000555323 LIMS2Q7Z4I7 341 aa13.65□□□□□ -0.22
SYNE2-219ENST00000555323 LMO3Q8TAP4 145 aa13.65□□□□□ -0.22
SYNE2-219ENST00000555323 POF1BQ8WVV4 589 aa13.65□□□□□ -0.22
SYNE2-219ENST00000555323 ARNTL2Q8WYA1 636 aa13.65□□□□□ -0.22
SYNE2-219ENST00000555323 HPDLQ96IR7 371 aa13.65□□□□□ -0.22
SYNE2-219ENST00000555323 ZNF560Q96MR9 790 aa13.65□□□□□ -0.22
SYNE2-219ENST00000555323 LMAN2LQ9H0V9 348 aa13.65□□□□□ -0.22
SYNE2-219ENST00000555323 NDST4Q9H3R1 872 aa13.65□□□□□ -0.22
SYNE2-219ENST00000555323 ALG13Q9NP73 1137 aaKnown RBP13.65□□□□□ -0.22
SYNE2-219ENST00000555323 R3HCC1Q9Y3T6 440 aaKnown RBP13.65□□□□□ -0.22
SYNE2-219ENST00000555323 EPOPA6NHQ4 379 aa13.64□□□□□ -0.23
SYNE2-219ENST00000555323 GRM6O15303 877 aa13.64□□□□□ -0.23
SYNE2-219ENST00000555323 LILRB3O75022 631 aa13.64□□□□□ -0.23
SYNE2-219ENST00000555323 CYP11A1P05108 521 aa13.64□□□□□ -0.23
SYNE2-219ENST00000555323 ATP1A3P13637 1013 aa13.64□□□□□ -0.23
SYNE2-219ENST00000555323 POU3F3P20264 500 aaPredicted RBP13.64□□□□□ -0.23
SYNE2-219ENST00000555323 FGFR3P22607 806 aa13.64□□□□□ -0.23
SYNE2-219ENST00000555323 TPM4P67936 248 aa13.64□□□□□ -0.23
SYNE2-219ENST00000555323 CETN1Q12798 172 aa13.64□□□□□ -0.23
SYNE2-219ENST00000555323 MRPL58Q14197 206 aaKnown RBP13.64□□□□□ -0.23
SYNE2-219ENST00000555323 KIAA0319Q5VV43 1072 aa13.64□□□□□ -0.23
SYNE2-219ENST00000555323 PDE12Q6L8Q7 609 aaKnown RBP13.64□□□□□ -0.23
SYNE2-219ENST00000555323 TAS1R1Q7RTX1 841 aa13.64□□□□□ -0.23
SYNE2-219ENST00000555323 VPS52Q8N1B4 723 aa13.64□□□□□ -0.23
SYNE2-219ENST00000555323 EHBP1Q8NDI1 1231 aa13.64□□□□□ -0.23
SYNE2-219ENST00000555323 ANKRD20A12PQ8NF67 263 aa13.64□□□□□ -0.23
SYNE2-219ENST00000555323 HASPINQ8TF76 798 aa13.64□□□□□ -0.23
SYNE2-219ENST00000555323 SEMA4DQ92854 862 aa13.64□□□□□ -0.23
SYNE2-219ENST00000555323 SENP8Q96LD8 212 aa13.64□□□□□ -0.23
SYNE2-219ENST00000555323 MMRN2Q9H8L6 949 aa13.64□□□□□ -0.23
SYNE2-219ENST00000555323 CERS4Q9HA82 394 aa13.64□□□□□ -0.23
SYNE2-219ENST00000555323 LMCD1Q9NZU5 365 aa13.64□□□□□ -0.23
SYNE2-219ENST00000555323 MTUS1Q9ULD2 1270 aa13.64□□□□□ -0.23
SYNE2-219ENST00000555323 IRAK3Q9Y616 596 aa13.64□□□□□ -0.23
SYNE2-219ENST00000555323 ARHGEF37A1IGU5 675 aa13.63□□□□□ -0.23
SYNE2-219ENST00000555323 GOLGA6L19H0YKK7 550 aa13.63□□□□□ -0.23
SYNE2-219ENST00000555323 FSCN2O14926 492 aa13.63□□□□□ -0.23
SYNE2-219ENST00000555323 LRRN2O75325 713 aa13.63□□□□□ -0.23
SYNE2-219ENST00000555323 OAZ2O95190 189 aa13.63□□□□□ -0.23
SYNE2-219ENST00000555323 CTSAP10619 480 aa13.63□□□□□ -0.23
SYNE2-219ENST00000555323 TYMPP19971 482 aa13.63□□□□□ -0.23
SYNE2-219ENST00000555323 DNAJB1P25685 340 aa13.63□□□□□ -0.23
SYNE2-219ENST00000555323 COPB1P53618 953 aaKnown RBP13.63□□□□□ -0.23
SYNE2-219ENST00000555323 DSG1Q02413 1049 aa13.63□□□□□ -0.23
SYNE2-219ENST00000555323 GRIN2CQ14957 1233 aa13.63□□□□□ -0.23
SYNE2-219ENST00000555323 USP41Q3LFD5 358 aa13.63□□□□□ -0.23
SYNE2-219ENST00000555323 ZNF697Q5TEC3 545 aa13.63□□□□□ -0.23
SYNE2-219ENST00000555323 FAM171A1Q5VUB5 890 aa13.63□□□□□ -0.23
SYNE2-219ENST00000555323 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.63□□□□□ -0.23
SYNE2-219ENST00000555323 GAS2L3Q86XJ1 694 aa13.63□□□□□ -0.23
SYNE2-219ENST00000555323 SPATA18Q8TC71 538 aa13.63□□□□□ -0.23
SYNE2-219ENST00000555323 HERC2P3Q9BVR0 1158 aa13.63□□□□□ -0.23
SYNE2-219ENST00000555323 ZBP1Q9H171 429 aa13.63□□□□□ -0.23
SYNE2-219ENST00000555323 PCDHB8Q9UN66 801 aa13.63□□□□□ -0.23
SYNE2-219ENST00000555323 SSX2IPQ9Y2D8 614 aa13.63□□□□□ -0.23
SYNE2-219ENST00000555323 CYB561D2O14569 222 aa13.62□□□□□ -0.23
SYNE2-219ENST00000555323 PIK3CAP42336 1068 aa13.62□□□□□ -0.23
SYNE2-219ENST00000555323 FXR1P51114 621 aaKnown RBP eCLIP13.62□□□□□ -0.23
SYNE2-219ENST00000555323 ERVFC1P60507 584 aa13.62□□□□□ -0.23
SYNE2-219ENST00000555323 MYL7Q01449 175 aa13.62□□□□□ -0.23
SYNE2-219ENST00000555323 KCNMA1Q12791 1236 aa13.62□□□□□ -0.23
SYNE2-219ENST00000555323 WDR72Q3MJ13 1102 aa13.62□□□□□ -0.23
SYNE2-219ENST00000555323 ZNF667Q5HYK9 610 aa13.62□□□□□ -0.23
SYNE2-219ENST00000555323 DSTYKQ6XUX3 929 aa13.62□□□□□ -0.23
SYNE2-219ENST00000555323 TOP6BLQ8N6T0 577 aa13.62□□□□□ -0.23
SYNE2-219ENST00000555323 MRPL43Q8N983 215 aaKnown RBP13.62□□□□□ -0.23
SYNE2-219ENST00000555323 CCDC150Q8NCX0 1101 aa13.62□□□□□ -0.23
SYNE2-219ENST00000555323 APPL2Q8NEU8 664 aa13.62□□□□□ -0.23
SYNE2-219ENST00000555323 LNX1Q8TBB1 728 aaPredicted RBP13.62□□□□□ -0.23
SYNE2-219ENST00000555323 PIK3R5Q8WYR1 880 aa13.62□□□□□ -0.23
SYNE2-219ENST00000555323 TTPALQ9BTX7 342 aa13.62□□□□□ -0.23
SYNE2-219ENST00000555323 VPS16Q9H269 839 aa13.62□□□□□ -0.23
SYNE2-219ENST00000555323 APOBEC3GQ9HC16 384 aaKnown RBP13.62□□□□□ -0.23
SYNE2-219ENST00000555323 NGRNQ9NPE2 291 aaKnown RBP13.62□□□□□ -0.23
SYNE2-219ENST00000555323 TLR9Q9NR96 1032 aa13.62□□□□□ -0.23
SYNE2-219ENST00000555323 TAB2Q9NYJ8 693 aa13.62□□□□□ -0.23
SYNE2-219ENST00000555323 DSEQ9UL01 958 aa13.62□□□□□ -0.23
SYNE2-219ENST00000555323 SNX9Q9Y5X1 595 aa13.62□□□□□ -0.23
SYNE2-219ENST00000555323 SCN1AP35498 2009 aa13.62□□□□□ -0.23
SYNE2-219ENST00000555323 KIAA1671Q9BY89 1806 aa13.62□□□□□ -0.23
SYNE2-219ENST00000555323 LGALS16A8MUM7 142 aa13.61□□□□□ -0.23
SYNE2-219ENST00000555323 I3L4J1 428 aa13.61□□□□□ -0.23
SYNE2-219ENST00000555323 RFXAPO00287 272 aa13.61□□□□□ -0.23
SYNE2-219ENST00000555323 GABRDO14764 452 aa13.61□□□□□ -0.23
SYNE2-219ENST00000555323 TBC1D4O60343 1298 aa13.61□□□□□ -0.23
SYNE2-219ENST00000555323 TACC1O75410 805 aa13.61□□□□□ -0.23
SYNE2-219ENST00000555323 TPM2P07951 284 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms