RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 NOP14P78316 857 aaKnown RBP11.58□□□□□ -0.56
TDP1-211ENST00000555178 ZBED6P86452 979 aa11.58□□□□□ -0.56
TDP1-211ENST00000555178 CETN1Q12798 172 aa11.58□□□□□ -0.56
TDP1-211ENST00000555178 HSP90AA2PQ14568 343 aaPredicted RBP11.58□□□□□ -0.56
TDP1-211ENST00000555178 SURF1Q15526 300 aa11.58□□□□□ -0.56
TDP1-211ENST00000555178 GLB1LQ6UWU2 654 aa11.58□□□□□ -0.56
TDP1-211ENST00000555178 C17orf53Q8N3J3 647 aaPredicted RBP11.58□□□□□ -0.56
TDP1-211ENST00000555178 ZNF689Q96CS4 500 aaPredicted RBP11.58□□□□□ -0.56
TDP1-211ENST00000555178 CHP1Q99653 195 aa11.58□□□□□ -0.56
TDP1-211ENST00000555178 MYO7AQ13402 2215 aa11.58□□□□□ -0.56
TDP1-211ENST00000555178 PIRO00625 290 aa11.57□□□□□ -0.56
TDP1-211ENST00000555178 TPM1P09493 284 aa11.57□□□□□ -0.56
TDP1-211ENST00000555178 SKIP12755 728 aa11.57□□□□□ -0.56
TDP1-211ENST00000555178 SKILP12757 684 aa11.57□□□□□ -0.56
TDP1-211ENST00000555178 CDH8P55286 799 aa11.57□□□□□ -0.56
TDP1-211ENST00000555178 JAM2P57087 298 aa11.57□□□□□ -0.56
TDP1-211ENST00000555178 POU5F1Q01860 360 aaKnown RBP11.57□□□□□ -0.56
TDP1-211ENST00000555178 DSC1Q08554 894 aa11.57□□□□□ -0.56
TDP1-211ENST00000555178 RASIP1Q5U651 963 aa11.57□□□□□ -0.56
TDP1-211ENST00000555178 SCARA5Q6ZMJ2 495 aa11.57□□□□□ -0.56
TDP1-211ENST00000555178 CD302Q8IX05 232 aa11.57□□□□□ -0.56
TDP1-211ENST00000555178 COLGALT2Q8IYK4 626 aa11.57□□□□□ -0.56
TDP1-211ENST00000555178 HERVK_113Q902F9 699 aa11.57□□□□□ -0.56
TDP1-211ENST00000555178 LBHD1Q9BQE6 289 aaPredicted RBP11.57□□□□□ -0.56
TDP1-211ENST00000555178 CWH43Q9H720 699 aa11.57□□□□□ -0.56
TDP1-211ENST00000555178 ACP6Q9NPH0 428 aa11.57□□□□□ -0.56
TDP1-211ENST00000555178 UBQLN1Q9UMX0 589 aaKnown RBP11.57□□□□□ -0.56
TDP1-211ENST00000555178 MYO9BQ13459 2157 aa11.57□□□□□ -0.56
TDP1-211ENST00000555178 FAM170AA1A519 330 aa11.56□□□□□ -0.56
TDP1-211ENST00000555178 F8VZ95 297 aa11.56□□□□□ -0.56
TDP1-211ENST00000555178 ASS1P00966 412 aaKnown RBP11.56□□□□□ -0.56
TDP1-211ENST00000555178 PFKMP08237 780 aa11.56□□□□□ -0.56
TDP1-211ENST00000555178 BRCC3P46736 316 aa11.56□□□□□ -0.56
TDP1-211ENST00000555178 DRAP1Q14919 205 aaPredicted RBP11.56□□□□□ -0.56
TDP1-211ENST00000555178 UPP1Q16831 310 aa11.56□□□□□ -0.56
TDP1-211ENST00000555178 OR8K1Q8NGG5 319 aa11.56□□□□□ -0.56
TDP1-211ENST00000555178 NT5C1BQ96P26 610 aa11.56□□□□□ -0.56
TDP1-211ENST00000555178 PANX2Q96RD6 677 aa11.56□□□□□ -0.56
TDP1-211ENST00000555178 BAG1Q99933 345 aaPredicted RBP11.56□□□□□ -0.56
TDP1-211ENST00000555178 NXF1Q9UBU9 619 aaKnown RBP11.56□□□□□ -0.56
TDP1-211ENST00000555178 PRG3Q9Y2Y8 225 aaPredicted RBP11.56□□□□□ -0.56
TDP1-211ENST00000555178 DERAQ9Y315 318 aa11.56□□□□□ -0.56
TDP1-211ENST00000555178 KIF4AO95239 1232 aa11.56□□□□□ -0.56
TDP1-211ENST00000555178 AMHP03971 560 aa11.56□□□□□ -0.56
TDP1-211ENST00000555178 LINC00271P0C7V0 271 aa11.56□□□□□ -0.56
TDP1-211ENST00000555178 SLC11A1P49279 550 aa11.56□□□□□ -0.56
TDP1-211ENST00000555178 AP3M2P53677 418 aa11.56□□□□□ -0.56
TDP1-211ENST00000555178 BCAR1P56945 870 aa11.56□□□□□ -0.56
TDP1-211ENST00000555178 GRIK3Q13003 919 aa11.56□□□□□ -0.56
TDP1-211ENST00000555178 ORC1Q13415 861 aa11.56□□□□□ -0.56
TDP1-211ENST00000555178 TRPC3Q13507 836 aa11.56□□□□□ -0.56
TDP1-211ENST00000555178 HACE1Q8IYU2 909 aa11.56□□□□□ -0.56
TDP1-211ENST00000555178 BEST2Q8NFU1 509 aa11.56□□□□□ -0.56
TDP1-211ENST00000555178 HPDLQ96IR7 371 aa11.56□□□□□ -0.56
TDP1-211ENST00000555178 B3GALT6Q96L58 329 aa11.56□□□□□ -0.56
TDP1-211ENST00000555178 SPAG5Q96R06 1193 aa11.56□□□□□ -0.56
TDP1-211ENST00000555178 GDF15Q99988 308 aa11.56□□□□□ -0.56
TDP1-211ENST00000555178 LPIN3Q9BQK8 851 aa11.56□□□□□ -0.56
TDP1-211ENST00000555178 SMYD3Q9H7B4 428 aa11.56□□□□□ -0.56
TDP1-211ENST00000555178 MRPL42Q9Y6G3 142 aaKnown RBP11.56□□□□□ -0.56
TDP1-211ENST00000555178 ATG2AQ2TAZ0 1938 aa11.55□□□□□ -0.56
TDP1-211ENST00000555178 FOXN3O00409 490 aaPredicted RBP11.55□□□□□ -0.56
TDP1-211ENST00000555178 PODXLO00592 558 aa11.55□□□□□ -0.56
TDP1-211ENST00000555178 ZC3H11AO75152 810 aaKnown RBP eCLIP11.55□□□□□ -0.56
TDP1-211ENST00000555178 GFPT2O94808 682 aa11.55□□□□□ -0.56
TDP1-211ENST00000555178 BAIAP3O94812 1187 aa11.55□□□□□ -0.56
TDP1-211ENST00000555178 GJB5O95377 273 aa11.55□□□□□ -0.56
TDP1-211ENST00000555178 WEE2P0C1S8 567 aa11.55□□□□□ -0.56
TDP1-211ENST00000555178 LRPAP1P30533 357 aa11.55□□□□□ -0.56
TDP1-211ENST00000555178 TUSC3Q13454 348 aa11.55□□□□□ -0.56
TDP1-211ENST00000555178 CCDC142Q17RM4 750 aa11.55□□□□□ -0.56
TDP1-211ENST00000555178 ZNF699Q32M78 642 aa11.55□□□□□ -0.56
TDP1-211ENST00000555178 PSRC1Q6PGN9 363 aaPredicted RBP11.55□□□□□ -0.56
TDP1-211ENST00000555178 RAD9BQ6WBX8 426 aa11.55□□□□□ -0.56
TDP1-211ENST00000555178 MARCH5Q9NX47 278 aa11.55□□□□□ -0.56
TDP1-211ENST00000555178 HMGXB4Q9UGU5 601 aa11.55□□□□□ -0.56
TDP1-211ENST00000555178 FBXL5Q9UKA1 691 aa11.55□□□□□ -0.56
TDP1-211ENST00000555178 TIMM13Q9Y5L4 95 aaPredicted RBP11.55□□□□□ -0.56
TDP1-211ENST00000555178 ASPAP45381 313 aa11.55□□□□□ -0.56
TDP1-211ENST00000555178 OR1G1P47890 313 aa11.55□□□□□ -0.56
TDP1-211ENST00000555178 KCNJ6P48051 423 aa11.55□□□□□ -0.56
TDP1-211ENST00000555178 LILRA4P59901 499 aa11.55□□□□□ -0.56
TDP1-211ENST00000555178 RNASELQ05823 741 aaKnown RBP11.55□□□□□ -0.56
TDP1-211ENST00000555178 MEA1Q16626 185 aa11.55□□□□□ -0.56
TDP1-211ENST00000555178 WDR72Q3MJ13 1102 aa11.55□□□□□ -0.56
TDP1-211ENST00000555178 WDR44Q5JSH3 913 aa11.55□□□□□ -0.56
TDP1-211ENST00000555178 HGSNATQ68CP4 663 aa11.55□□□□□ -0.56
TDP1-211ENST00000555178 TAS1R1Q7RTX1 841 aa11.55□□□□□ -0.56
TDP1-211ENST00000555178 HERC6Q8IVU3 1022 aa11.55□□□□□ -0.56
TDP1-211ENST00000555178 ABI1Q8IZP0 508 aa11.55□□□□□ -0.56
TDP1-211ENST00000555178 ZNF397Q8NF99 534 aaPredicted RBP11.55□□□□□ -0.56
TDP1-211ENST00000555178 DESI2Q9BSY9 194 aa11.55□□□□□ -0.56
TDP1-211ENST00000555178 VN1R3Q9BXE9 311 aa11.55□□□□□ -0.56
TDP1-211ENST00000555178 UBN1Q9NPG3 1134 aa11.55□□□□□ -0.56
TDP1-211ENST00000555178 ARHGAP20Q9P2F6 1191 aa11.55□□□□□ -0.56
TDP1-211ENST00000555178 ITGA11Q9UKX5 1188 aa11.55□□□□□ -0.56
TDP1-211ENST00000555178 NR2E3Q9Y5X4 410 aa11.55□□□□□ -0.56
TDP1-211ENST00000555178 SLC4A7Q9Y6M7 1214 aa11.55□□□□□ -0.56
TDP1-211ENST00000555178 NRP1O14786 923 aa11.54□□□□□ -0.56
TDP1-211ENST00000555178 CYP3A5P20815 502 aa11.54□□□□□ -0.56
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