RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 TMEM191CA6NGB0 347 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 LRRIQ3A6PVS8 624 aaPredicted RBP7.2□□□□□ -1.26
SYNE2-216ENST00000555002 ZBTB39O15060 712 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 CAND2O75155 1236 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 PLEKHA8P1O95397 391 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 FTLP02792 175 aaPredicted RBP7.2□□□□□ -1.26
SYNE2-216ENST00000555002 AKAP5P24588 427 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 VAMP7P51809 220 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 DTX3LQ8TDB6 740 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 ROGDIQ9GZN7 287 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 STRNO43815 780 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 RPN2P04844 631 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 CCDC130P13994 396 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 CBFBQ13951 182 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 NSUN6Q8TEA1 469 aaKnown RBP7.2□□□□□ -1.26
SYNE2-216ENST00000555002 AHCYL2Q96HN2 611 aaKnown RBP7.2□□□□□ -1.26
SYNE2-216ENST00000555002 SLC9A8Q9Y2E8 581 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 KIF21AQ7Z4S6 1674 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 PSMD12O00232 456 aaPredicted RBP7.2□□□□□ -1.26
SYNE2-216ENST00000555002 TRIM49P0CI25 452 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 TRIM49CP0CI26 452 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 P3H1Q32P28 736 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 ZNF618Q5T7W0 954 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 CACUL1Q86Y37 369 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 MFSD1Q9H3U5 465 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 FAM49BQ9NUQ9 324 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 TRPC4Q9UBN4 977 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 LIMA1Q9UHB6 759 aaKnown RBP7.2□□□□□ -1.26
SYNE2-216ENST00000555002 RNASEH1O60930 286 aaKnown RBP7.2□□□□□ -1.26
SYNE2-216ENST00000555002 NDUFA10O95299 355 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 MYBL1P10243 752 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 ZBED6P86452 979 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 FOXR1Q6PIV2 292 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 PI16Q6UXB8 463 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 ASXL2Q76L83 1435 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 BBOX1O75936 387 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 RHOBTB1O94844 696 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 RRM2P31350 389 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 CCR4P51679 360 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 NFRKBQ6P4R8 1299 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 MICU2Q8IYU8 434 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 SLC7A14Q8TBB6 771 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.19□□□□□ -1.26
SYNE2-216ENST00000555002 FBXO40Q9UH90 709 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 PCDHA6Q9UN73 950 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 PCDHA8Q9Y5H6 950 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 EDC4Q6P2E9 1401 aaKnown RBP7.19□□□□□ -1.26
SYNE2-216ENST00000555002 FAM25AB3EWG3 89 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 FAM25CB3EWG5 89 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 FAM25GB3EWG6 89 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 SH2B2O14492 632 aaPredicted RBP7.19□□□□□ -1.26
SYNE2-216ENST00000555002 MKRN4PQ13434 485 aaPredicted RBP7.19□□□□□ -1.26
SYNE2-216ENST00000555002 USP10Q14694 798 aaKnown RBP7.19□□□□□ -1.26
SYNE2-216ENST00000555002 ARMC4Q5T2S8 1044 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 HAUS6Q7Z4H7 955 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 CENPLQ8N0S6 344 aaPredicted RBP7.19□□□□□ -1.26
SYNE2-216ENST00000555002 CARNMT1Q8N4J0 409 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 SPATA18Q8TC71 538 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.19□□□□□ -1.26
SYNE2-216ENST00000555002 STAMBPL1Q96FJ0 436 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 OLFM1Q99784 485 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 COQ7Q99807 217 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 LXNQ9BS40 222 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 GID8Q9NWU2 228 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 ADAMTS1Q9UHI8 967 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 MYO3BQ8WXR4 1341 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 C16orf96A6NNT2 1141 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.19□□□□□ -1.26
SYNE2-216ENST00000555002 USP17L10C9JJH3 530 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 ZBTB7BO15156 539 aaPredicted RBP7.19□□□□□ -1.26
SYNE2-216ENST00000555002 C6orf222P0C671 652 aaPredicted RBP7.19□□□□□ -1.26
SYNE2-216ENST00000555002 VCLP18206 1134 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 DRAP1Q14919 205 aaPredicted RBP7.19□□□□□ -1.26
SYNE2-216ENST00000555002 OR8H2Q8N162 312 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 RNF149Q8NC42 400 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 TMEM143Q96AN5 459 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 MAGED4Q96JG8 741 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 SIKE1Q9BRV8 207 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 ACAD9Q9H845 621 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 HOXC10Q9NYD6 342 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 BLOC1S6Q9UL45 172 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 NPHP3-ACAD11A0A0J9YXS1 232 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 GNG14A0A1W2PPG7 69 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 USP17L15C9J2P7 530 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 USP17L13C9JLJ4 530 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 USP17L11C9JVI0 530 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 USP17L18D6R9N7 530 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 USP17L22D6RA61 530 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 USP17L17D6RBQ6 530 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 USP17L19D6RCP7 530 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 USP17L20D6RJB6 530 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 SMNDC1O75940 238 aaKnown RBP eCLIP7.19□□□□□ -1.26
SYNE2-216ENST00000555002 ACADMP11310 421 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 USP17L24Q0WX57 530 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 USP17L6PQ6QN14 398 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 TMEM179Q6ZVK1 233 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 SPIRE2Q8WWL2 714 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 C19orf60Q96EN9 201 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 TASP1Q9H6P5 420 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 JPH1Q9HDC5 661 aaPredicted RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms