RNA–Protein interactions for RNA: ENST00000554813.5

APEX1-208, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-208ENST00000554813 EFCAB13Q8IY85 973 aa14.31□□□□□ -0.12
APEX1-208ENST00000554813 FMR1NBQ8N0W7 255 aaPredicted RBP14.31□□□□□ -0.12
APEX1-208ENST00000554813 TMEM130Q8N3G9 435 aa14.31□□□□□ -0.12
APEX1-208ENST00000554813 XXYLT1Q8NBI6 393 aa14.31□□□□□ -0.12
APEX1-208ENST00000554813 ZNF461Q8TAF7 563 aa14.31□□□□□ -0.12
APEX1-208ENST00000554813 SMG7Q92540 1137 aaKnown RBP14.31□□□□□ -0.12
APEX1-208ENST00000554813 SENP8Q96LD8 212 aa14.31□□□□□ -0.12
APEX1-208ENST00000554813 PRKD2Q9BZL6 878 aa14.31□□□□□ -0.12
APEX1-208ENST00000554813 PDE11AQ9HCR9 933 aa14.31□□□□□ -0.12
APEX1-208ENST00000554813 TSHZ2Q9NRE2 1034 aa14.31□□□□□ -0.12
APEX1-208ENST00000554813 CHMP5Q9NZZ3 219 aa14.31□□□□□ -0.12
APEX1-208ENST00000554813 CDH22Q9UJ99 828 aa14.31□□□□□ -0.12
APEX1-208ENST00000554813 FBXL5Q9UKA1 691 aa14.31□□□□□ -0.12
APEX1-208ENST00000554813 FBXW11Q9UKB1 542 aa14.31□□□□□ -0.12
APEX1-208ENST00000554813 R3HCC1Q9Y3T6 440 aaKnown RBP14.31□□□□□ -0.12
APEX1-208ENST00000554813 NCOR1O75376 2440 aa14.3□□□□□ -0.12
APEX1-208ENST00000554813 PPEF2O14830 753 aa14.3□□□□□ -0.12
APEX1-208ENST00000554813 RFPL2O75678 378 aa14.3□□□□□ -0.12
APEX1-208ENST00000554813 RHOBTB3O94955 611 aa14.3□□□□□ -0.12
APEX1-208ENST00000554813 PAPLNO95428 1278 aa14.3□□□□□ -0.12
APEX1-208ENST00000554813 HNRNPA1P09651 372 aaKnown RBP eCLIP14.3□□□□□ -0.12
APEX1-208ENST00000554813 PRR29P0C7W0 189 aa14.3□□□□□ -0.12
APEX1-208ENST00000554813 TYMPP19971 482 aa14.3□□□□□ -0.12
APEX1-208ENST00000554813 PNPLA4P41247 253 aa14.3□□□□□ -0.12
APEX1-208ENST00000554813 TAF6P49848 677 aa14.3□□□□□ -0.12
APEX1-208ENST00000554813 CYP2J2P51589 502 aa14.3□□□□□ -0.12
APEX1-208ENST00000554813 ARPP19P56211 112 aa14.3□□□□□ -0.12
APEX1-208ENST00000554813 FAM160A1Q05DH4 1040 aa14.3□□□□□ -0.12
APEX1-208ENST00000554813 KCNB1Q14721 858 aa14.3□□□□□ -0.12
APEX1-208ENST00000554813 SNRNP35Q16560 246 aaKnown RBP14.3□□□□□ -0.12
APEX1-208ENST00000554813 SV2CQ496J9 727 aa14.3□□□□□ -0.12
APEX1-208ENST00000554813 PPM1LQ5SGD2 360 aa14.3□□□□□ -0.12
APEX1-208ENST00000554813 TPGS2Q68CL5 300 aa14.3□□□□□ -0.12
APEX1-208ENST00000554813 CCDC149Q6ZUS6 474 aa14.3□□□□□ -0.12
APEX1-208ENST00000554813 RNF135Q8IUD6 432 aa14.3□□□□□ -0.12
APEX1-208ENST00000554813 CBWD2Q8IUF1 395 aa14.3□□□□□ -0.12
APEX1-208ENST00000554813 CSGALNACT2Q8N6G5 542 aa14.3□□□□□ -0.12
APEX1-208ENST00000554813 RDH13Q8NBN7 331 aa14.3□□□□□ -0.12
APEX1-208ENST00000554813 KIAA0895Q8NCT3 520 aa14.3□□□□□ -0.12
APEX1-208ENST00000554813 ANKRD36BP1Q96IX9 119 aa14.3□□□□□ -0.12
APEX1-208ENST00000554813 HOOK1Q9UJC3 728 aaKnown RBP14.3□□□□□ -0.12
APEX1-208ENST00000554813 ITGA11Q9UKX5 1188 aa14.3□□□□□ -0.12
APEX1-208ENST00000554813 DSEQ9UL01 958 aa14.3□□□□□ -0.12
APEX1-208ENST00000554813 MAFFQ9ULX9 164 aa14.3□□□□□ -0.12
APEX1-208ENST00000554813 USTQ9Y2C2 406 aa14.3□□□□□ -0.12
APEX1-208ENST00000554813 TIMM13Q9Y5L4 95 aaPredicted RBP14.3□□□□□ -0.12
APEX1-208ENST00000554813 VWA8A3KMH1 1905 aa14.3□□□□□ -0.12
APEX1-208ENST00000554813 KPNA7A9QM74 516 aa14.29□□□□□ -0.12
APEX1-208ENST00000554813 PI4K2BG5E9Z4 385 aa14.29□□□□□ -0.12
APEX1-208ENST00000554813 PDXKO00764 312 aa14.29□□□□□ -0.12
APEX1-208ENST00000554813 CYB561D2O14569 222 aa14.29□□□□□ -0.12
APEX1-208ENST00000554813 SPTLC1O15269 473 aa14.29□□□□□ -0.12
APEX1-208ENST00000554813 EXOC3O60645 756 aa14.29□□□□□ -0.12
APEX1-208ENST00000554813 XYLBO75191 536 aa14.29□□□□□ -0.12
APEX1-208ENST00000554813 PRPF40AO75400 957 aaKnown RBP14.29□□□□□ -0.12
APEX1-208ENST00000554813 ABLIM3O94929 683 aa14.29□□□□□ -0.12
APEX1-208ENST00000554813 TNNC2P02585 160 aa14.29□□□□□ -0.12
APEX1-208ENST00000554813 C8AP07357 584 aa14.29□□□□□ -0.12
APEX1-208ENST00000554813 TMEM191BP0C7N4 346 aa14.29□□□□□ -0.12
APEX1-208ENST00000554813 ATF2P15336 505 aa14.29□□□□□ -0.12
APEX1-208ENST00000554813 HOXA9P31269 272 aa14.29□□□□□ -0.12
APEX1-208ENST00000554813 WNT7BP56706 349 aa14.29□□□□□ -0.12
APEX1-208ENST00000554813 RBP5P82980 135 aa14.29□□□□□ -0.12
APEX1-208ENST00000554813 ROR1Q01973 937 aa14.29□□□□□ -0.12
APEX1-208ENST00000554813 SNW1Q13573 536 aaKnown RBP14.29□□□□□ -0.12
APEX1-208ENST00000554813 DUOXA2Q1HG44 320 aa14.29□□□□□ -0.12
APEX1-208ENST00000554813 OVOS1Q6IE37 1185 aa14.29□□□□□ -0.12
APEX1-208ENST00000554813 OTOP3Q7RTS5 596 aa14.29□□□□□ -0.12
APEX1-208ENST00000554813 METTL23Q86XA0 190 aa14.29□□□□□ -0.12
APEX1-208ENST00000554813 PLCD3Q8N3E9 789 aa14.29□□□□□ -0.12
APEX1-208ENST00000554813 ENGASEQ8NFI3 743 aa14.29□□□□□ -0.12
APEX1-208ENST00000554813 SLC7A14Q8TBB6 771 aa14.29□□□□□ -0.12
APEX1-208ENST00000554813 ZNF707Q96C28 371 aaPredicted RBP14.29□□□□□ -0.12
APEX1-208ENST00000554813 ACSF2Q96CM8 615 aaPredicted RBP14.29□□□□□ -0.12
APEX1-208ENST00000554813 ZNF560Q96MR9 790 aa14.29□□□□□ -0.12
APEX1-208ENST00000554813 TIGD1Q96MW7 591 aa14.29□□□□□ -0.12
APEX1-208ENST00000554813 FNBP1Q96RU3 617 aa14.29□□□□□ -0.12
APEX1-208ENST00000554813 C1QTNF1Q9BXJ1 281 aa14.29□□□□□ -0.12
APEX1-208ENST00000554813 WDR6Q9NNW5 1121 aaKnown RBP14.29□□□□□ -0.12
APEX1-208ENST00000554813 INTS13Q9NVM9 706 aa14.29□□□□□ -0.12
APEX1-208ENST00000554813 RMND1Q9NWS8 449 aa14.29□□□□□ -0.12
APEX1-208ENST00000554813 AGAP1Q9UPQ3 857 aa14.29□□□□□ -0.12
APEX1-208ENST00000554813 PLXNA3P51805 1871 aa14.29□□□□□ -0.12
APEX1-208ENST00000554813 OR6C75A6NL08 312 aa14.28□□□□□ -0.12
APEX1-208ENST00000554813 PRRG1O14668 218 aa14.28□□□□□ -0.12
APEX1-208ENST00000554813 DCXO43602 365 aa14.28□□□□□ -0.12
APEX1-208ENST00000554813 SMC2O95347 1197 aa14.28□□□□□ -0.12
APEX1-208ENST00000554813 ITGB3P05106 788 aa14.28□□□□□ -0.12
APEX1-208ENST00000554813 KRT19P08727 400 aa14.28□□□□□ -0.12
APEX1-208ENST00000554813 ANK1P16157 1881 aa14.28□□□□□ -0.12
APEX1-208ENST00000554813 SP100P23497 879 aaPredicted RBP14.28□□□□□ -0.12
APEX1-208ENST00000554813 POLR2BP30876 1174 aaKnown RBP14.28□□□□□ -0.12
APEX1-208ENST00000554813 WDR49Q8IV35 697 aa14.28□□□□□ -0.12
APEX1-208ENST00000554813 THEM5Q8N1Q8 247 aa14.28□□□□□ -0.12
APEX1-208ENST00000554813 LRRC52Q8N7C0 313 aa14.28□□□□□ -0.12
APEX1-208ENST00000554813 C1orf127Q8N9H9 656 aa14.28□□□□□ -0.12
APEX1-208ENST00000554813 TDRD5Q8NAT2 981 aaKnown RBP14.28□□□□□ -0.12
APEX1-208ENST00000554813 TMEM174Q8WUU8 243 aa14.28□□□□□ -0.12
APEX1-208ENST00000554813 KCTD10Q9H3F6 313 aa14.28□□□□□ -0.12
APEX1-208ENST00000554813 MTCL1Q9Y4B5 1905 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms