RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 POLR3FQ9H1D9 316 aaPredicted RBP10.08□□□□□ -0.8
SYNE2-213ENST00000554805 COQ4Q9Y3A0 265 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 PCDHA10Q9Y5I2 948 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 LRRD1A4D1F6 860 aa10.07□□□□□ -0.8
SYNE2-213ENST00000554805 SGK1O00141 431 aa10.07□□□□□ -0.8
SYNE2-213ENST00000554805 GRIN3BO60391 1043 aa10.07□□□□□ -0.8
SYNE2-213ENST00000554805 ZBED4O75132 1171 aa10.07□□□□□ -0.8
SYNE2-213ENST00000554805 FOXN2P32314 431 aa10.07□□□□□ -0.8
SYNE2-213ENST00000554805 BNIP1Q12981 228 aa10.07□□□□□ -0.8
SYNE2-213ENST00000554805 ANKMY2Q8IV38 441 aa10.07□□□□□ -0.8
SYNE2-213ENST00000554805 ZBED8Q8IZ13 594 aa10.07□□□□□ -0.8
SYNE2-213ENST00000554805 CLEC4DQ8WXI8 215 aa10.07□□□□□ -0.8
SYNE2-213ENST00000554805 ATP6V0A1Q93050 837 aa10.07□□□□□ -0.8
SYNE2-213ENST00000554805 MFSD14AQ96MC6 490 aa10.07□□□□□ -0.8
SYNE2-213ENST00000554805 TCHPQ9BT92 498 aa10.07□□□□□ -0.8
SYNE2-213ENST00000554805 FHDC1Q9C0D6 1143 aaPredicted RBP10.07□□□□□ -0.8
SYNE2-213ENST00000554805 KIF9Q9HAQ2 790 aa10.07□□□□□ -0.8
SYNE2-213ENST00000554805 AVENQ9NQS1 362 aaPredicted RBP10.07□□□□□ -0.8
SYNE2-213ENST00000554805 GJA3Q9Y6H8 435 aa10.07□□□□□ -0.8
SYNE2-213ENST00000554805 SFNP31947 248 aa10.07□□□□□ -0.8
SYNE2-213ENST00000554805 GCNT1Q02742 428 aa10.07□□□□□ -0.8
SYNE2-213ENST00000554805 NFX1Q12986 1120 aaKnown RBP10.07□□□□□ -0.8
SYNE2-213ENST00000554805 SPARCL1Q14515 664 aa10.07□□□□□ -0.8
SYNE2-213ENST00000554805 PGM5Q15124 567 aa10.07□□□□□ -0.8
SYNE2-213ENST00000554805 SEZ6Q53EL9 994 aa10.07□□□□□ -0.8
SYNE2-213ENST00000554805 TNFAIP8L3Q5GJ75 292 aa10.07□□□□□ -0.8
SYNE2-213ENST00000554805 SLC39A4Q6P5W5 647 aa10.07□□□□□ -0.8
SYNE2-213ENST00000554805 SPOCK2Q92563 424 aa10.07□□□□□ -0.8
SYNE2-213ENST00000554805 AKT1S1Q96B36 256 aa10.07□□□□□ -0.8
SYNE2-213ENST00000554805 ST6GALNAC4Q9H4F1 302 aa10.07□□□□□ -0.8
SYNE2-213ENST00000554805 LYPLA2O95372 231 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 UNGP13051 313 aaPredicted RBP10.06□□□□□ -0.8
SYNE2-213ENST00000554805 TAC1P20366 129 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 CDC25CP30307 473 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 GTF2H1P32780 548 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 LMNB2Q03252 620 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 BAATQ14032 418 aaPredicted RBP10.06□□□□□ -0.8
SYNE2-213ENST00000554805 RSBN1LQ6PCB5 846 aaPredicted RBP10.06□□□□□ -0.8
SYNE2-213ENST00000554805 CEP128Q6ZU80 1094 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 NIPA1Q7RTP0 329 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 ECHDC2Q86YB7 292 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 RBBP8NLQ8NC74 664 aaPredicted RBP10.06□□□□□ -0.8
SYNE2-213ENST00000554805 SUPT20HQ8NEM7 779 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 DEPTORQ8TB45 409 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 SLCO2A1Q92959 643 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 TMEM143Q96AN5 459 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 RAB3IPQ96QF0 476 aaPredicted RBP10.06□□□□□ -0.8
SYNE2-213ENST00000554805 PDCD2LQ9BRP1 358 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 MOV10L1Q9BXT6 1211 aaKnown RBP10.06□□□□□ -0.8
SYNE2-213ENST00000554805 IMPG2Q9BZV3 1241 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 SLCO1B3Q9NPD5 702 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 TXLNGQ9NUQ3 528 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 DNPEPQ9ULA0 475 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 AGTPBP1Q9UPW5 1226 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 C15orf41Q9Y2V0 281 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 SLX4Q8IY92 1834 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 MYPNQ86TC9 1320 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 PMM2O15305 246 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 NEBLO76041 1014 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 DPEP1P16444 411 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 TARSP26639 723 aaKnown RBP10.06□□□□□ -0.8
SYNE2-213ENST00000554805 DSG3P32926 999 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 PTGER2P43116 358 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 POLGP54098 1239 aaPredicted RBP10.06□□□□□ -0.8
SYNE2-213ENST00000554805 NOP14P78316 857 aaKnown RBP10.06□□□□□ -0.8
SYNE2-213ENST00000554805 PDIA2Q13087 525 aaKnown RBP10.06□□□□□ -0.8
SYNE2-213ENST00000554805 ZNF268Q14587 947 aaPredicted RBP10.06□□□□□ -0.8
SYNE2-213ENST00000554805 PKN2Q16513 984 aaKnown RBP10.06□□□□□ -0.8
SYNE2-213ENST00000554805 MIS18BP1Q6P0N0 1132 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 ERICH1Q86X53 443 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 MICAL1Q8TDZ2 1067 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 AGO2Q9UKV8 859 aaKnown RBP10.06□□□□□ -0.8
SYNE2-213ENST00000554805 PHTF1Q9UMS5 762 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 TP73O15350 636 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 PSTPIP1O43586 416 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 PIAS1O75925 651 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 CCND1P24385 295 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 NLRP11P59045 1033 aaKnown RBP10.06□□□□□ -0.8
SYNE2-213ENST00000554805 RIPK1Q13546 671 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 MTFR1Q15390 333 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 TRIM68Q6AZZ1 485 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 CRELD2Q6UXH1 353 aaPredicted RBP10.06□□□□□ -0.8
SYNE2-213ENST00000554805 FEZF2Q8TBJ5 459 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 ZNF516Q92618 1163 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 GRAMD1AQ96CP6 724 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 ZBTB45Q96K62 511 aaPredicted RBP10.06□□□□□ -0.8
SYNE2-213ENST00000554805 TMEM237Q96Q45 408 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 LRRC37BQ96QE4 947 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 MYLK2Q9H1R3 596 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 HAO1Q9UJM8 370 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 SCINQ9Y6U3 715 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 ZNF536O15090 1300 aa10.06□□□□□ -0.8
SYNE2-213ENST00000554805 H0Y3Z8 333 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 TJP3O95049 919 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 PECAM1P16284 738 aaPredicted RBP10.05□□□□□ -0.8
SYNE2-213ENST00000554805 WDR4P57081 412 aaKnown RBP10.05□□□□□ -0.8
SYNE2-213ENST00000554805 MAMLD1Q13495 774 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 PRKG1Q13976 671 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 DNAJC24Q6P3W2 148 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 MFSD7Q6UXD7 560 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms