RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 HOMER1Q86YM7 354 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 RIOX2Q8IUF8 465 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 TMEM151AQ8N4L1 468 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 GBP7Q8N8V2 638 aaPredicted RBP3.68□□□□□ -1.82
SEC23A-207ENST00000554615 IL31RAQ8NI17 732 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 TTC25Q96NG3 672 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 UHRF1Q96T88 793 aaPredicted RBP3.68□□□□□ -1.82
SEC23A-207ENST00000554615 PCDH9Q9HC56 1237 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 PRDM10Q9NQV6 1147 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 SIRPGQ9P1W8 387 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 KLHL14Q9P2G3 628 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 RABGEF1Q9UJ41 708 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 NFU1Q9UMS0 254 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.68□□□□□ -1.82
SEC23A-207ENST00000554615 EP400Q96L91 3159 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 TRIP12Q14669 1992 aaPredicted RBP3.68□□□□□ -1.82
SEC23A-207ENST00000554615 NRCAMQ92823 1304 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 A0A0G2JLL6 359 aaPredicted RBP3.68□□□□□ -1.82
SEC23A-207ENST00000554615 ZSCAN5CA6NGD5 496 aaPredicted RBP3.68□□□□□ -1.82
SEC23A-207ENST00000554615 C19orf81C9J6K1 198 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 GCOM1H8Y6P7 765 aaPredicted RBP3.68□□□□□ -1.82
SEC23A-207ENST00000554615 VWA5AO00534 786 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 TM9SF1O15321 606 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 KIF1CO43896 1103 aaKnown RBP3.68□□□□□ -1.82
SEC23A-207ENST00000554615 ATP9AO75110 1047 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 POLR2MP0CAP2 368 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 TGFB3P10600 412 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 C7P10643 843 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 IL4RP24394 825 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 QARSP47897 775 aaKnown RBP3.68□□□□□ -1.82
SEC23A-207ENST00000554615 MYL7Q01449 175 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 SCAPQ12770 1279 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 MSLNQ13421 630 aaPredicted RBP3.68□□□□□ -1.82
SEC23A-207ENST00000554615 STAT4Q14765 748 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 PRKD1Q15139 912 aaPredicted RBP3.68□□□□□ -1.82
SEC23A-207ENST00000554615 KYAT1Q16773 422 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 FAXCQ5TGI0 409 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 ARHGAP17Q68EM7 881 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 KRT39Q6A163 491 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 PGM2L1Q6PCE3 622 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 BBS12Q6ZW61 710 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 KRT27Q7Z3Y8 459 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 PRRT2Q7Z6L0 340 aaPredicted RBP3.68□□□□□ -1.82
SEC23A-207ENST00000554615 PASD1Q8IV76 773 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 CNTN4Q8IWV2 1026 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 SH2D3CQ8N5H7 860 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 CPSF7Q8N684 471 aaKnown RBP3.68□□□□□ -1.82
SEC23A-207ENST00000554615 ZNF513Q8N8E2 541 aaPredicted RBP3.68□□□□□ -1.82
SEC23A-207ENST00000554615 XXYLT1Q8NBI6 393 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 CHST13Q8NET6 341 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 CCDC26Q8TAB7 109 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 SLC7A3Q8WY07 619 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 RPGRQ92834 1020 aaKnown RBP3.68□□□□□ -1.82
SEC23A-207ENST00000554615 CHMP6Q96FZ7 201 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 PRMT6Q96LA8 375 aaPredicted RBP3.68□□□□□ -1.82
SEC23A-207ENST00000554615 GDAP1L1Q96MZ0 367 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 EPB41L5Q9HCM4 733 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 ATP13A1Q9HD20 1204 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 OSGEPQ9NPF4 335 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 KCNH7Q9NS40 1196 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 MTMR10Q9NXD2 777 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 NINJ2Q9NZG7 142 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 AMFRQ9UKV5 643 aa3.68□□□□□ -1.82
SEC23A-207ENST00000554615 CCDC189A1A4V9 331 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 BACH1O14867 736 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 HSF2BPO75031 334 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 ATP5HO75947 161 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 SNUPNO95149 360 aaKnown RBP3.67□□□□□ -1.82
SEC23A-207ENST00000554615 SUPT20HL2P0C7V6 817 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 TBXAS1P24557 533 aaPredicted RBP3.67□□□□□ -1.82
SEC23A-207ENST00000554615 ATICP31939 592 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 PSEN1P49768 467 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 SLC26A2P50443 739 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 ILF2Q12905 390 aaKnown RBP3.67□□□□□ -1.82
SEC23A-207ENST00000554615 SUPT20HL1Q3ZLR7 823 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 DNTTIP2Q5QJE6 756 aaKnown RBP3.67□□□□□ -1.82
SEC23A-207ENST00000554615 RABGAP1LQ5R372 815 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 TDRD10Q5VZ19 366 aaKnown RBP3.67□□□□□ -1.82
SEC23A-207ENST00000554615 CES4AQ5XG92 561 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 BHLHA9Q7RTU4 235 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 EXOC8Q8IYI6 725 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 THNSL1Q8IYQ7 743 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.67□□□□□ -1.823e-9■■□□□ 13.2
SEC23A-207ENST00000554615 SLC20A1Q8WUM9 679 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 KRT35Q92764 455 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 STAMQ92783 540 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 LRRC39Q96DD0 335 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 SNF8Q96H20 258 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 CCDC43Q96MW1 224 aaKnown RBP3.67□□□□□ -1.82
SEC23A-207ENST00000554615 C7orf26Q96N11 449 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 LXNQ9BS40 222 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 USP29Q9HBJ7 922 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 DDX56Q9NY93 547 aaKnown RBP3.67□□□□□ -1.82
SEC23A-207ENST00000554615 MOCS1Q9NZB8 636 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 CNOT11Q9UKZ1 510 aaKnown RBP3.67□□□□□ -1.82
SEC23A-207ENST00000554615 SORCS3Q9UPU3 1222 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 PCDHB2Q9Y5E7 798 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 MICAL3Q7RTP6 2002 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 EVPLQ92817 2033 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 GSTTP1A0A1W2PQM5 241 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms