RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 TXLNBQ8N3L3 684 aa8.2□□□□□ -1.1
TDP1-209ENST00000554180 RNF169Q8NCN4 708 aa8.2□□□□□ -1.1
TDP1-209ENST00000554180 URGCPQ8TCY9 931 aa8.2□□□□□ -1.1
TDP1-209ENST00000554180 KAT5Q92993 513 aa8.2□□□□□ -1.1
TDP1-209ENST00000554180 C18orf25Q96B23 403 aaPredicted RBP8.2□□□□□ -1.1
TDP1-209ENST00000554180 TRIM43Q96BQ3 446 aaPredicted RBP8.2□□□□□ -1.1
TDP1-209ENST00000554180 DDX27Q96GQ7 796 aaKnown RBP8.2□□□□□ -1.1
TDP1-209ENST00000554180 ZNF830Q96NB3 372 aaPredicted RBP8.2□□□□□ -1.1
TDP1-209ENST00000554180 MRPL9Q9BYD2 267 aaKnown RBP8.2□□□□□ -1.1
TDP1-209ENST00000554180 CXCL16Q9H2A7 254 aa8.2□□□□□ -1.1
TDP1-209ENST00000554180 DEF6Q9H4E7 631 aa8.2□□□□□ -1.1
TDP1-209ENST00000554180 NHEJ1Q9H9Q4 299 aaPredicted RBP8.2□□□□□ -1.1
TDP1-209ENST00000554180 GDAP2Q9NXN4 497 aa8.2□□□□□ -1.1
TDP1-209ENST00000554180 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.2□□□□□ -1.1
TDP1-209ENST00000554180 PRKAG2Q9UGJ0 569 aa8.2□□□□□ -1.1
TDP1-209ENST00000554180 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.19□□□□□ -1.1
TDP1-209ENST00000554180 GOLGA6L9A6NEM1 432 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 EIF3CLB5ME19 914 aaKnown RBP8.19□□□□□ -1.1
TDP1-209ENST00000554180 RBAK-RBAKDNI3L0D1 243 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 ZSCAN12O43309 604 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 AKR1B10O60218 316 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 OFD1O75665 1012 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 CCDC175P0C221 793 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 EIF4A3P38919 411 aaKnown RBP8.19□□□□□ -1.1
TDP1-209ENST00000554180 AARSP49588 968 aaKnown RBP eCLIP8.19□□□□□ -1.1
TDP1-209ENST00000554180 PDE6CP51160 858 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 GUCY2FP51841 1108 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 KIF11P52732 1056 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 ZNF132P52740 706 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 KRT83P78385 493 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 PTK2Q05397 1052 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 SOX4Q06945 474 aaPredicted RBP8.19□□□□□ -1.1
TDP1-209ENST00000554180 DSC1Q08554 894 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 INCA1Q0VD86 236 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 SLC18A3Q16572 532 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 ASTE1Q2TB18 679 aaPredicted RBP8.19□□□□□ -1.1
TDP1-209ENST00000554180 NOMO2Q5JPE7 1267 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 CLLU1OSQ5K130 101 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 RAD9BQ6WBX8 426 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 DPH6Q7L8W6 267 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 LIMS2Q7Z4I7 341 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 DEFB128Q7Z7B8 93 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 ABI1Q8IZP0 508 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 SPATA18Q8TC71 538 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 EPS8L1Q8TE68 723 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 VWCEQ96DN2 955 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 EIF3CQ99613 913 aaKnown RBP8.19□□□□□ -1.1
TDP1-209ENST00000554180 CHP1Q99653 195 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 ARID3AQ99856 593 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 SYT11Q9BT88 431 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 HTATIP2Q9BUP3 242 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 DNAI2Q9GZS0 605 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 HAUS4Q9H6D7 363 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 LUC7LQ9NQ29 371 aaKnown RBP8.19□□□□□ -1.1
TDP1-209ENST00000554180 PRDM5Q9NQX1 630 aaPredicted RBP8.19□□□□□ -1.1
TDP1-209ENST00000554180 RNF19AQ9NV58 838 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 LRFN2Q9ULH4 789 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 PYCARDQ9ULZ3 195 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 PCDHB7Q9Y5E2 793 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 EPN1Q9Y6I3 576 aaPredicted RBP8.19□□□□□ -1.1
TDP1-209ENST00000554180 ATP8B3O60423 1300 aa8.19□□□□□ -1.1
TDP1-209ENST00000554180 PDCD11Q14690 1871 aaKnown RBP8.18□□□□□ -1.1
TDP1-209ENST00000554180 ARHGEF37A1IGU5 675 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 CARNS1A5YM72 827 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 KPNA7A9QM74 516 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 ESPNB1AK53 854 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 TMEM189-UBE2V1I3L0A0 370 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 PODXLO00592 558 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 PPEF2O14830 753 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 CYP26A1O43174 497 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 CILPO75339 1184 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 TACC1O75410 805 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 PLEKP08567 350 aaPredicted RBP8.18□□□□□ -1.1
TDP1-209ENST00000554180 PAEPP09466 180 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 PNMA6AP0CW24 399 aaPredicted RBP8.18□□□□□ -1.1
TDP1-209ENST00000554180 KRT5P13647 590 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 CSF2RAP15509 400 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 CYP11B1P15538 503 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 ITGB8P26012 769 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 CLCN1P35523 988 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 USP8P40818 1118 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 LILRA4P59901 499 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 ARID5AQ03989 594 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 PPIGQ13427 754 aaKnown RBP eCLIP8.18□□□□□ -1.1
TDP1-209ENST00000554180 MTF1Q14872 753 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 SPA17Q15506 151 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 UPP1Q16831 310 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 TCTN1Q2MV58 587 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 C10orf76Q5T2E6 689 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 TMEM270Q6UE05 265 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 ZNF662Q6ZS27 426 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 TOGARAM2Q6ZUX3 1019 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 ZNF571Q7Z3V5 609 aaPredicted RBP8.18□□□□□ -1.1
TDP1-209ENST00000554180 UNC93AQ86WB7 457 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 TOP6BLQ8N6T0 577 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 RBBP8NLQ8NC74 664 aaPredicted RBP8.18□□□□□ -1.1
TDP1-209ENST00000554180 SMYD3Q9H7B4 428 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 GOLGA2P5Q9HBQ8 144 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 IL23AQ9NPF7 189 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.18□□□□□ -1.12e-9■■■■■ 223.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms