RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 NEUROD6Q96NK8 337 aa3.85□□□□□ -1.79
SLIRP-202ENST00000553981 KCNJ15Q99712 375 aa3.85□□□□□ -1.79
SLIRP-202ENST00000553981 RIOK1Q9BRS2 568 aaKnown RBP3.85□□□□□ -1.79
SLIRP-202ENST00000553981 TACO1Q9BSH4 297 aaKnown RBP3.85□□□□□ -1.79
SLIRP-202ENST00000553981 RPAP3Q9H6T3 665 aaPredicted RBP3.85□□□□□ -1.79
SLIRP-202ENST00000553981 FBXO28Q9NVF7 368 aa3.85□□□□□ -1.79
SLIRP-202ENST00000553981 RAI14Q9P0K7 980 aa3.85□□□□□ -1.79
SLIRP-202ENST00000553981 PI4KBQ9UBF8 816 aa3.85□□□□□ -1.79
SLIRP-202ENST00000553981 DBNLQ9UJU6 430 aaKnown RBP3.85□□□□□ -1.79
SLIRP-202ENST00000553981 ATP11BQ9Y2G3 1177 aa3.85□□□□□ -1.79
SLIRP-202ENST00000553981 UMODL1Q5DID0 1318 aa3.85□□□□□ -1.79
SLIRP-202ENST00000553981 PTPRSQ13332 1948 aa3.85□□□□□ -1.79
SLIRP-202ENST00000553981 LCTP09848 1927 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 MCM3APO60318 1980 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 CYP2D7A0A087X1C5 515 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 TCRBV5S4A2TA0A5A2 114 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 SLC15A5A6NIM6 579 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 C19orf81C9J6K1 198 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 ACOT7O00154 380 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 PRKAB2O43741 272 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 SNAI1O95863 264 aaPredicted RBP3.84□□□□□ -1.79
SLIRP-202ENST00000553981 PGK2P07205 417 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 ASNSP08243 561 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 GNAT1P11488 350 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 TRIM27P14373 513 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 AKR1B1P15121 316 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 MYOGP15173 224 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 ADORA2AP29274 412 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 CNGA1P29973 690 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 MAPK4P31152 587 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 EPHA5P54756 1037 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 IRX3P78415 501 aaPredicted RBP3.84□□□□□ -1.79
SLIRP-202ENST00000553981 SMAD3P84022 425 aaKnown RBP3.84□□□□□ -1.79
SLIRP-202ENST00000553981 SPIRE1Q08AE8 756 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 TMEM132BQ14DG7 1078 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 ALDH1L2Q3SY69 923 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 USP39Q53GS9 565 aaKnown RBP3.84□□□□□ -1.79
SLIRP-202ENST00000553981 TMEM240Q5SV17 173 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 AGBL4Q5VU57 503 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 KRT40Q6A162 431 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 NAA16Q6N069 864 aaPredicted RBP3.84□□□□□ -1.79
SLIRP-202ENST00000553981 KCNT2Q6UVM3 1135 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 KCTD1Q719H9 257 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 FOXP4Q8IVH2 680 aaPredicted RBP3.84□□□□□ -1.79
SLIRP-202ENST00000553981 TMEM57Q8N5G2 664 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 KLHDC9Q8NEP7 349 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 SDR42E1Q8WUS8 393 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 SOCS4Q8WXH5 440 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 ANKS1AQ92625 1134 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 EDAQ92838 391 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 EXTL1Q92935 676 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 MAML3Q96JK9 1138 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.84□□□□□ -1.796e-7■■■□□ 18.5
SLIRP-202ENST00000553981 CCDC8Q9H0W5 538 aaPredicted RBP3.84□□□□□ -1.79
SLIRP-202ENST00000553981 AS3MTQ9HBK9 375 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 SMC4Q9NTJ3 1288 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 HERC5Q9UII4 1024 aaKnown RBP3.84□□□□□ -1.79
SLIRP-202ENST00000553981 DSEQ9UL01 958 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 RABGAP1Q9Y3P9 1069 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 RIPK3Q9Y572 518 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 NUB1Q9Y5A7 615 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 FPGT-TNNI3KV9GXZ4 949 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 ASTN1O14525 1302 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 GRIN2DO15399 1336 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 MUC3AQ02505 3323 aa3.84□□□□□ -1.79
SLIRP-202ENST00000553981 NAV1Q8NEY1 1877 aa3.84□□□□□ -1.8
SLIRP-202ENST00000553981 GREB1LQ9C091 1923 aaPredicted RBP3.83□□□□□ -1.8
SLIRP-202ENST00000553981 BAZ2AQ9UIF9 1905 aaKnown RBP3.83□□□□□ -1.8
SLIRP-202ENST00000553981 SCN5AQ14524 2016 aa3.83□□□□□ -1.8
SLIRP-202ENST00000553981 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.83□□□□□ -1.8
SLIRP-202ENST00000553981 E9PSI1 815 aa3.83□□□□□ -1.8
SLIRP-202ENST00000553981 KIAA0355O15063 1070 aa3.83□□□□□ -1.8
SLIRP-202ENST00000553981 SEPT4O43236 478 aa3.83□□□□□ -1.8
SLIRP-202ENST00000553981 FOSL2P15408 326 aa3.83□□□□□ -1.8
SLIRP-202ENST00000553981 CAPN2P17655 700 aa3.83□□□□□ -1.8
SLIRP-202ENST00000553981 COMTP21964 271 aa3.83□□□□□ -1.8
SLIRP-202ENST00000553981 CDK7P50613 346 aa3.83□□□□□ -1.8
SLIRP-202ENST00000553981 TFF2Q03403 129 aa3.83□□□□□ -1.8
SLIRP-202ENST00000553981 KRTAP1-1Q07627 177 aa3.83□□□□□ -1.8
SLIRP-202ENST00000553981 MVPQ14764 893 aaKnown RBP3.83□□□□□ -1.8
SLIRP-202ENST00000553981 NTRK3Q16288 839 aa3.83□□□□□ -1.8
SLIRP-202ENST00000553981 RNF151Q2KHN1 245 aa3.83□□□□□ -1.8
SLIRP-202ENST00000553981 KIZQ2M2Z5 673 aa3.83□□□□□ -1.8
SLIRP-202ENST00000553981 TCTN1Q2MV58 587 aa3.83□□□□□ -1.8
SLIRP-202ENST00000553981 ZNF568Q3ZCX4 644 aa3.83□□□□□ -1.8
SLIRP-202ENST00000553981 NRN1LQ496H8 165 aa3.83□□□□□ -1.8
SLIRP-202ENST00000553981 Q6ZSN1 163 aa3.83□□□□□ -1.8
SLIRP-202ENST00000553981 RASGRP2Q7LDG7 609 aa3.83□□□□□ -1.8
SLIRP-202ENST00000553981 LCORLQ8N3X6 602 aa3.83□□□□□ -1.8
SLIRP-202ENST00000553981 ZGPATQ8N5A5 531 aaKnown RBP3.83□□□□□ -1.8
SLIRP-202ENST00000553981 MAGEB6Q8N7X4 407 aa3.83□□□□□ -1.8
SLIRP-202ENST00000553981 SSH3Q8TE77 659 aa3.83□□□□□ -1.8
SLIRP-202ENST00000553981 DCAF4Q8WV16 495 aa3.83□□□□□ -1.8
SLIRP-202ENST00000553981 PPM1EQ8WY54 764 aa3.83□□□□□ -1.8
SLIRP-202ENST00000553981 SPATC1LQ9H0A9 340 aa3.83□□□□□ -1.8
SLIRP-202ENST00000553981 KIAA1683Q9H0B3 1180 aa3.83□□□□□ -1.8
SLIRP-202ENST00000553981 PRDM12Q9H4Q4 367 aa3.83□□□□□ -1.8
SLIRP-202ENST00000553981 EPHX3Q9H6B9 360 aa3.83□□□□□ -1.8
SLIRP-202ENST00000553981 GNL3LQ9NVN8 582 aaKnown RBP3.83□□□□□ -1.8
SLIRP-202ENST00000553981 TMOD4Q9NZQ9 345 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms