RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 PTPRDP23468 1912 aa9.99□□□□□ -0.81
PRKCH-208ENST00000553846 APC2O95996 2303 aa9.99□□□□□ -0.81
PRKCH-208ENST00000553846 CITO14578 2027 aa9.99□□□□□ -0.81
PRKCH-208ENST00000553846 ATG2BQ96BY7 2078 aa9.98□□□□□ -0.81
PRKCH-208ENST00000553846 ABCA7Q8IZY2 2146 aa9.98□□□□□ -0.81
PRKCH-208ENST00000553846 DENND4CQ5VZ89 1909 aa9.98□□□□□ -0.81
PRKCH-208ENST00000553846 SMIM28A0A1B0GU29 152 aa9.98□□□□□ -0.81
PRKCH-208ENST00000553846 LRRIQ4A6NIV6 560 aa9.98□□□□□ -0.81
PRKCH-208ENST00000553846 WNT7AO00755 349 aa9.98□□□□□ -0.81
PRKCH-208ENST00000553846 CDX4O14627 284 aaPredicted RBP9.98□□□□□ -0.81
PRKCH-208ENST00000553846 ABLIM1O14639 778 aa9.98□□□□□ -0.81
PRKCH-208ENST00000553846 USO1O60763 962 aaKnown RBP9.98□□□□□ -0.81
PRKCH-208ENST00000553846 DEXIO95424 95 aa9.98□□□□□ -0.81
PRKCH-208ENST00000553846 PRAMEF12O95522 483 aa9.98□□□□□ -0.81
PRKCH-208ENST00000553846 CSRP1P21291 193 aaKnown RBP9.98□□□□□ -0.81
PRKCH-208ENST00000553846 TNK2Q07912 1038 aa9.98□□□□□ -0.81
PRKCH-208ENST00000553846 PRPF4BQ13523 1007 aaKnown RBP9.98□□□□□ -0.81
PRKCH-208ENST00000553846 PON2Q15165 354 aa9.98□□□□□ -0.81
PRKCH-208ENST00000553846 DCAF4L1Q3SXM0 396 aa9.98□□□□□ -0.81
PRKCH-208ENST00000553846 BMP2KLQ5H9B9 411 aa9.98□□□□□ -0.81
PRKCH-208ENST00000553846 TMEM196Q5HYL7 178 aa9.98□□□□□ -0.81
PRKCH-208ENST00000553846 CYP4A22Q5TCH4 519 aa9.98□□□□□ -0.81
PRKCH-208ENST00000553846 SH3PXD2AQ5TCZ1 1133 aa9.98□□□□□ -0.81
PRKCH-208ENST00000553846 NT5DC1Q5TFE4 455 aa9.98□□□□□ -0.81
PRKCH-208ENST00000553846 RNF43Q68DV7 783 aa9.98□□□□□ -0.81
PRKCH-208ENST00000553846 FSTL4Q6MZW2 842 aa9.98□□□□□ -0.81
PRKCH-208ENST00000553846 RNF19BQ6ZMZ0 732 aa9.98□□□□□ -0.81
PRKCH-208ENST00000553846 GAREM2Q75VX8 874 aa9.98□□□□□ -0.81
PRKCH-208ENST00000553846 CEP120Q8N960 986 aa9.98□□□□□ -0.81
PRKCH-208ENST00000553846 PIGOQ8TEQ8 1089 aa9.98□□□□□ -0.81
PRKCH-208ENST00000553846 COL26A1Q96A83 441 aa9.98□□□□□ -0.81
PRKCH-208ENST00000553846 JAKMIP1Q96N16 626 aaKnown RBP9.98□□□□□ -0.81
PRKCH-208ENST00000553846 SLKQ9H2G2 1235 aaPredicted RBP9.98□□□□□ -0.81
PRKCH-208ENST00000553846 ASAH2Q9NR71 780 aa9.98□□□□□ -0.81
PRKCH-208ENST00000553846 POLR3BQ9NW08 1133 aaPredicted RBP9.98□□□□□ -0.81
PRKCH-208ENST00000553846 KCNJ14Q9UNX9 436 aa9.98□□□□□ -0.81
PRKCH-208ENST00000553846 GDAQ9Y2T3 454 aa9.98□□□□□ -0.81
PRKCH-208ENST00000553846 YIPF1Q9Y548 306 aa9.98□□□□□ -0.81
PRKCH-208ENST00000553846 OBSL1O75147 1896 aa9.98□□□□□ -0.81
PRKCH-208ENST00000553846 ADAMTS20P59510 1910 aa9.97□□□□□ -0.81
PRKCH-208ENST00000553846 A0A087WWV3 80 aa9.97□□□□□ -0.81
PRKCH-208ENST00000553846 A0A1W2PRU2 124 aa9.97□□□□□ -0.81
PRKCH-208ENST00000553846 BCLAF3A2AJT9 711 aaKnown RBP9.97□□□□□ -0.81
PRKCH-208ENST00000553846 OTOL1A6NHN0 477 aaPredicted RBP9.97□□□□□ -0.81
PRKCH-208ENST00000553846 C4orf47A7E2U8 309 aa9.97□□□□□ -0.81
PRKCH-208ENST00000553846 PODXLO00592 558 aa9.97□□□□□ -0.81
PRKCH-208ENST00000553846 TRAPPC3O43617 180 aa9.97□□□□□ -0.81
PRKCH-208ENST00000553846 CCNT1O60563 726 aaKnown RBP9.97□□□□□ -0.81
PRKCH-208ENST00000553846 MYL4P12829 197 aa9.97□□□□□ -0.81
PRKCH-208ENST00000553846 XRCC6P12956 609 aaKnown RBP eCLIP9.97□□□□□ -0.81
PRKCH-208ENST00000553846 CEACAM1P13688 526 aa9.97□□□□□ -0.81
PRKCH-208ENST00000553846 WEE1P30291 646 aa9.97□□□□□ -0.81
PRKCH-208ENST00000553846 ELF1P32519 619 aa9.97□□□□□ -0.81
PRKCH-208ENST00000553846 HSPA4P34932 840 aa9.97□□□□□ -0.81
PRKCH-208ENST00000553846 FOXC1Q12948 553 aa9.97□□□□□ -0.81
PRKCH-208ENST00000553846 MAPK6Q16659 721 aa9.97□□□□□ -0.81
PRKCH-208ENST00000553846 ARID3BQ8IVW6 561 aaPredicted RBP9.97□□□□□ -0.81
PRKCH-208ENST00000553846 SLFN12Q8IYM2 578 aa9.97□□□□□ -0.81
PRKCH-208ENST00000553846 CSGALNACT1Q8TDX6 532 aa9.97□□□□□ -0.81
PRKCH-208ENST00000553846 ZCCHC14Q8WYQ9 949 aaKnown RBP9.97□□□□□ -0.81
PRKCH-208ENST00000553846 EZH1Q92800 747 aaPredicted RBP9.97□□□□□ -0.81
PRKCH-208ENST00000553846 SUSD3Q96L08 255 aa9.97□□□□□ -0.81
PRKCH-208ENST00000553846 SCNM1Q9BWG6 230 aa9.97□□□□□ -0.81
PRKCH-208ENST00000553846 GPR88Q9GZN0 384 aa9.97□□□□□ -0.81
PRKCH-208ENST00000553846 PTPRHQ9HD43 1115 aa9.97□□□□□ -0.81
PRKCH-208ENST00000553846 GJB4Q9NTQ9 266 aa9.97□□□□□ -0.81
PRKCH-208ENST00000553846 OBP2AQ9NY56 170 aa9.97□□□□□ -0.81
PRKCH-208ENST00000553846 LHX6Q9UPM6 363 aa9.97□□□□□ -0.81
PRKCH-208ENST00000553846 TENM4Q6N022 2769 aa9.96□□□□□ -0.81
PRKCH-208ENST00000553846 KCNE1P15382 129 aa9.96□□□□□ -0.82
PRKCH-208ENST00000553846 GRM5P41594 1212 aa9.96□□□□□ -0.82
PRKCH-208ENST00000553846 NAMPTP43490 491 aa9.96□□□□□ -0.82
PRKCH-208ENST00000553846 KPNA1P52294 538 aaPredicted RBP9.96□□□□□ -0.82
PRKCH-208ENST00000553846 FGD1P98174 961 aa9.96□□□□□ -0.82
PRKCH-208ENST00000553846 SSRP1Q08945 709 aaKnown RBP9.96□□□□□ -0.82
PRKCH-208ENST00000553846 ARHGAP29Q52LW3 1261 aa9.96□□□□□ -0.82
PRKCH-208ENST00000553846 BLOC1S2Q6QNY1 142 aa9.96□□□□□ -0.82
PRKCH-208ENST00000553846 PIK3AP1Q6ZUJ8 805 aa9.96□□□□□ -0.82
PRKCH-208ENST00000553846 ZBTB8OSQ8IWT0 167 aa9.96□□□□□ -0.82
PRKCH-208ENST00000553846 TRIM22Q8IYM9 498 aa9.96□□□□□ -0.82
PRKCH-208ENST00000553846 MCPH1Q8NEM0 835 aa9.96□□□□□ -0.82
PRKCH-208ENST00000553846 TTC8Q8TAM2 541 aa9.96□□□□□ -0.82
PRKCH-208ENST00000553846 RIN3Q8TB24 985 aa9.96□□□□□ -0.82
PRKCH-208ENST00000553846 ZNF512Q96ME7 567 aaPredicted RBP9.96□□□□□ -0.82
PRKCH-208ENST00000553846 MTMR9Q96QG7 549 aa9.96□□□□□ -0.82
PRKCH-208ENST00000553846 FAM83CQ9BQN1 747 aa9.96□□□□□ -0.82
PRKCH-208ENST00000553846 KIFC3Q9BVG8 833 aa9.96□□□□□ -0.82
PRKCH-208ENST00000553846 C2orf40Q9H1Z8 148 aa9.96□□□□□ -0.82
PRKCH-208ENST00000553846 CDT1Q9H211 546 aa9.96□□□□□ -0.82
PRKCH-208ENST00000553846 HPS4Q9NQG7 708 aa9.96□□□□□ -0.82
PRKCH-208ENST00000553846 CNTN3Q9P232 1028 aa9.96□□□□□ -0.82
PRKCH-208ENST00000553846 DAXXQ9UER7 740 aaPredicted RBP9.96□□□□□ -0.82
PRKCH-208ENST00000553846 NEUROG3Q9Y4Z2 214 aa9.96□□□□□ -0.82
PRKCH-208ENST00000553846 ACACAQ13085 2346 aa9.96□□□□□ -0.82
PRKCH-208ENST00000553846 CCDC194A0A1B0GVG4 234 aa9.95□□□□□ -0.82
PRKCH-208ENST00000553846 FAM221BA6H8Z2 402 aa9.95□□□□□ -0.82
PRKCH-208ENST00000553846 H7C4K7 107 aa9.95□□□□□ -0.82
PRKCH-208ENST00000553846 TRDMT1O14717 391 aaKnown RBP9.95□□□□□ -0.82
PRKCH-208ENST00000553846 DCLK1O15075 740 aa9.95□□□□□ -0.82
PRKCH-208ENST00000553846 OAZ2O95190 189 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms