RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 H3BQ06 376 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-223ENST00000553686 WNT9AO14904 365 aa7.1□□□□□ -1.27
ATXN3-223ENST00000553686 NOBOXO60393 691 aa7.1□□□□□ -1.27
ATXN3-223ENST00000553686 SUPT20HL2P0C7V6 817 aa7.1□□□□□ -1.27
ATXN3-223ENST00000553686 PYGMP11217 842 aa7.1□□□□□ -1.27
ATXN3-223ENST00000553686 FAHP16930 419 aa7.1□□□□□ -1.27
ATXN3-223ENST00000553686 VCAM1P19320 739 aa7.1□□□□□ -1.27
ATXN3-223ENST00000553686 NBL1P41271 181 aa7.1□□□□□ -1.27
ATXN3-223ENST00000553686 PUM1Q14671 1186 aaKnown RBP eCLIP7.1□□□□□ -1.27
ATXN3-223ENST00000553686 KCTD2Q14681 263 aa7.1□□□□□ -1.27
ATXN3-223ENST00000553686 PAN2Q504Q3 1202 aaKnown RBP7.1□□□□□ -1.27
ATXN3-223ENST00000553686 PRR31Q5SQ13 230 aa7.1□□□□□ -1.27
ATXN3-223ENST00000553686 MCTP2Q6DN12 878 aa7.1□□□□□ -1.27
ATXN3-223ENST00000553686 ARHGAP36Q6ZRI8 547 aa7.1□□□□□ -1.27
ATXN3-223ENST00000553686 EP400NLQ6ZTU2 488 aa7.1□□□□□ -1.27
ATXN3-223ENST00000553686 FRMD5Q7Z6J6 570 aa7.1□□□□□ -1.27
ATXN3-223ENST00000553686 ZNF761Q86XN6 746 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-223ENST00000553686 ADSSL1Q8N142 457 aa7.1□□□□□ -1.27
ATXN3-223ENST00000553686 ADAMTS17Q8TE56 1095 aa7.1□□□□□ -1.27
ATXN3-223ENST00000553686 GDPD5Q8WTR4 605 aa7.1□□□□□ -1.27
ATXN3-223ENST00000553686 ZSWIM3Q96MP5 696 aa7.1□□□□□ -1.27
ATXN3-223ENST00000553686 TGS1Q96RS0 853 aaKnown RBP7.1□□□□□ -1.27
ATXN3-223ENST00000553686 TMEM209Q96SK2 561 aa7.1□□□□□ -1.27
ATXN3-223ENST00000553686 NOL10Q9BSC4 688 aaKnown RBP7.1□□□□□ -1.27
ATXN3-223ENST00000553686 ADAM7Q9H2U9 754 aa7.1□□□□□ -1.27
ATXN3-223ENST00000553686 RPAP3Q9H6T3 665 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-223ENST00000553686 BAHCC1Q9P281 2608 aa7.1□□□□□ -1.27
ATXN3-223ENST00000553686 C5orf42Q9H799 3197 aa7.1□□□□□ -1.27
ATXN3-223ENST00000553686 UMODL1Q5DID0 1318 aa7.09□□□□□ -1.27
ATXN3-223ENST00000553686 GSTA4O15217 222 aa7.09□□□□□ -1.27
ATXN3-223ENST00000553686 ZEB2O60315 1214 aa7.09□□□□□ -1.27
ATXN3-223ENST00000553686 EFCAB14O75071 495 aa7.09□□□□□ -1.27
ATXN3-223ENST00000553686 ALDH1L1O75891 902 aa7.09□□□□□ -1.27
ATXN3-223ENST00000553686 GH2P01242 217 aa7.09□□□□□ -1.27
ATXN3-223ENST00000553686 RFC2P35250 354 aa7.09□□□□□ -1.27
ATXN3-223ENST00000553686 EPHA5P54756 1037 aa7.09□□□□□ -1.27
ATXN3-223ENST00000553686 GJA9P57773 515 aa7.09□□□□□ -1.27
ATXN3-223ENST00000553686 WDR43Q15061 677 aaKnown RBP eCLIP7.09□□□□□ -1.27
ATXN3-223ENST00000553686 GPR19Q15760 415 aa7.09□□□□□ -1.27
ATXN3-223ENST00000553686 TWISTNBQ3B726 338 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-223ENST00000553686 C2orf27AQ580R0 203 aa7.09□□□□□ -1.27
ATXN3-223ENST00000553686 LCE1DQ5T752 114 aa7.09□□□□□ -1.27
ATXN3-223ENST00000553686 KCTD1Q719H9 257 aa7.09□□□□□ -1.27
ATXN3-223ENST00000553686 DEFB128Q7Z7B8 93 aa7.09□□□□□ -1.27
ATXN3-223ENST00000553686 ZC3H7AQ8IWR0 971 aaKnown RBP7.09□□□□□ -1.27
ATXN3-223ENST00000553686 TEX11Q8IYF3 940 aa7.09□□□□□ -1.27
ATXN3-223ENST00000553686 SLC7A14Q8TBB6 771 aa7.09□□□□□ -1.27
ATXN3-223ENST00000553686 SH3RF2Q8TEC5 729 aa7.09□□□□□ -1.27
ATXN3-223ENST00000553686 DDX1Q92499 740 aaKnown RBP7.09□□□□□ -1.27
ATXN3-223ENST00000553686 UBXN4Q92575 508 aa7.09□□□□□ -1.27
ATXN3-223ENST00000553686 PABPC5Q96DU9 382 aaKnown RBP7.09□□□□□ -1.27
ATXN3-223ENST00000553686 MRFAP1L1Q96HT8 127 aa7.09□□□□□ -1.27
ATXN3-223ENST00000553686 SCLYQ96I15 445 aa7.09□□□□□ -1.27
ATXN3-223ENST00000553686 MAGEB10Q96LZ2 347 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-223ENST00000553686 CD244Q9BZW8 370 aa7.09□□□□□ -1.27
ATXN3-223ENST00000553686 FTOQ9C0B1 505 aaKnown RBP eCLIP7.09□□□□□ -1.27
ATXN3-223ENST00000553686 WNT8AQ9H1J5 351 aa7.09□□□□□ -1.27
ATXN3-223ENST00000553686 RTEL1Q9NZ71 1219 aa7.09□□□□□ -1.27
ATXN3-223ENST00000553686 CROTQ9UKG9 612 aa7.09□□□□□ -1.27
ATXN3-223ENST00000553686 NCOR2Q9Y618 2525 aa7.09□□□□□ -1.27
ATXN3-223ENST00000553686 LRRC37A2A6NM11 1700 aa7.08□□□□□ -1.28
ATXN3-223ENST00000553686 FOXD2O60548 495 aaPredicted RBP7.08□□□□□ -1.28
ATXN3-223ENST00000553686 BAIAP3O94812 1187 aa7.08□□□□□ -1.28
ATXN3-223ENST00000553686 BAG3O95817 575 aa7.08□□□□□ -1.28
ATXN3-223ENST00000553686 APPP05067 770 aa7.08□□□□□ -1.28
ATXN3-223ENST00000553686 HLA-DOAP06340 250 aa7.08□□□□□ -1.28
ATXN3-223ENST00000553686 CKMP06732 381 aa7.08□□□□□ -1.28
ATXN3-223ENST00000553686 PDE6AP16499 860 aa7.08□□□□□ -1.28
ATXN3-223ENST00000553686 KRT15P19012 456 aa7.08□□□□□ -1.28
ATXN3-223ENST00000553686 DNM2P50570 870 aa7.08□□□□□ -1.28
ATXN3-223ENST00000553686 ERVK-21P61565 698 aa7.08□□□□□ -1.28
ATXN3-223ENST00000553686 ZXDAP98168 799 aa7.08□□□□□ -1.28
ATXN3-223ENST00000553686 MECOMQ03112 1051 aa7.08□□□□□ -1.28
ATXN3-223ENST00000553686 ITGA7Q13683 1181 aa7.08□□□□□ -1.28
ATXN3-223ENST00000553686 SMAD2Q15796 467 aaKnown RBP7.08□□□□□ -1.28
ATXN3-223ENST00000553686 CRY1Q16526 586 aa7.08□□□□□ -1.28
ATXN3-223ENST00000553686 CCDC144BQ3MJ40 725 aa7.08□□□□□ -1.28
ATXN3-223ENST00000553686 BTBD8Q5XKL5 378 aa7.08□□□□□ -1.28
ATXN3-223ENST00000553686 PROSER1Q86XN7 944 aa7.08□□□□□ -1.28
ATXN3-223ENST00000553686 NLGN4XQ8N0W4 816 aa7.08□□□□□ -1.28
ATXN3-223ENST00000553686 MRPL38Q96DV4 380 aaKnown RBP7.08□□□□□ -1.28
ATXN3-223ENST00000553686 RAD9AQ99638 391 aa7.08□□□□□ -1.28
ATXN3-223ENST00000553686 LNPKQ9C0E8 428 aa7.08□□□□□ -1.28
ATXN3-223ENST00000553686 UPF3AQ9H1J1 476 aaKnown RBP7.08□□□□□ -1.28
ATXN3-223ENST00000553686 CABP5Q9NP86 173 aa7.08□□□□□ -1.28
ATXN3-223ENST00000553686 ZHX1Q9UKY1 873 aaPredicted RBP7.08□□□□□ -1.28
ATXN3-223ENST00000553686 CBLCQ9ULV8 474 aa7.08□□□□□ -1.28
ATXN3-223ENST00000553686 RLFQ13129 1914 aa7.07□□□□□ -1.28
ATXN3-223ENST00000553686 TNKSO95271 1327 aa7.07□□□□□ -1.28
ATXN3-223ENST00000553686 PLXNB2O15031 1838 aa7.07□□□□□ -1.28
ATXN3-223ENST00000553686 MYADML2A6NDP7 307 aa7.07□□□□□ -1.28
ATXN3-223ENST00000553686 ACOT7O00154 380 aa7.07□□□□□ -1.28
ATXN3-223ENST00000553686 EYA2O00167 538 aa7.07□□□□□ -1.28
ATXN3-223ENST00000553686 CYP7B1O75881 506 aa7.07□□□□□ -1.28
ATXN3-223ENST00000553686 AMY2AP04746 511 aa7.07□□□□□ -1.28
ATXN3-223ENST00000553686 PGK2P07205 417 aa7.07□□□□□ -1.28
ATXN3-223ENST00000553686 AMY2BP19961 511 aa7.07□□□□□ -1.28
ATXN3-223ENST00000553686 COPB2P35606 906 aa7.07□□□□□ -1.28
ATXN3-223ENST00000553686 MLLT6P55198 1093 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-223ENST00000553686 SIGLEC14Q08ET2 396 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms