RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 TMEM196Q5HYL7 178 aa15.19■□□□□ 0.02
PRPF39-204ENST00000553605 STXBP5Q5T5C0 1151 aa15.19■□□□□ 0.02
PRPF39-204ENST00000553605 PPP4R3AQ6IN85 833 aa15.19■□□□□ 0.02
PRPF39-204ENST00000553605 ZBTB8OSQ8IWT0 167 aa15.19■□□□□ 0.02
PRPF39-204ENST00000553605 RASEFQ8IZ41 740 aa15.19■□□□□ 0.02
PRPF39-204ENST00000553605 HAS1Q92839 578 aa15.19■□□□□ 0.02
PRPF39-204ENST00000553605 LRRC3Q9BY71 257 aa15.19■□□□□ 0.02
PRPF39-204ENST00000553605 OBP2AQ9NY56 170 aa15.19■□□□□ 0.02
PRPF39-204ENST00000553605 NID2Q14112 1375 aa15.19■□□□□ 0.02
PRPF39-204ENST00000553605 PATE3B3GLJ2 98 aa15.18■□□□□ 0.02
PRPF39-204ENST00000553605 CAPNS1P04632 268 aa15.18■□□□□ 0.02
PRPF39-204ENST00000553605 HMGB1P09429 215 aaKnown RBP15.18■□□□□ 0.02
PRPF39-204ENST00000553605 IRX4P78413 519 aa15.18■□□□□ 0.02
PRPF39-204ENST00000553605 CACNB1Q02641 598 aaPredicted RBP15.18■□□□□ 0.02
PRPF39-204ENST00000553605 CDCA2Q69YH5 1023 aaPredicted RBP15.18■□□□□ 0.02
PRPF39-204ENST00000553605 FSTL4Q6MZW2 842 aa15.18■□□□□ 0.02
PRPF39-204ENST00000553605 RNF19BQ6ZMZ0 732 aa15.18■□□□□ 0.02
PRPF39-204ENST00000553605 Q6ZUG5 572 aa15.18■□□□□ 0.02
PRPF39-204ENST00000553605 MAEAQ7L5Y9 396 aa15.18■□□□□ 0.02
PRPF39-204ENST00000553605 TMC8Q8IU68 726 aa15.18■□□□□ 0.02
PRPF39-204ENST00000553605 BRF1Q92994 677 aa15.18■□□□□ 0.02
PRPF39-204ENST00000553605 CCDC43Q96MW1 224 aaKnown RBP15.18■□□□□ 0.02
PRPF39-204ENST00000553605 MKNK1Q9BUB5 465 aa15.18■□□□□ 0.02
PRPF39-204ENST00000553605 GPRC5CQ9NQ84 441 aa15.18■□□□□ 0.02
PRPF39-204ENST00000553605 ASH1LQ9NR48 2969 aaKnown RBP15.18■□□□□ 0.02
PRPF39-204ENST00000553605 TPCN1Q9ULQ1 816 aa15.18■□□□□ 0.02
PRPF39-204ENST00000553605 USP20Q9Y2K6 914 aa15.18■□□□□ 0.02
PRPF39-204ENST00000553605 SMIM28A0A1B0GU29 152 aa15.17■□□□□ 0.02
PRPF39-204ENST00000553605 FAM221BA6H8Z2 402 aa15.17■□□□□ 0.02
PRPF39-204ENST00000553605 MEFVO15553 781 aaPredicted RBP15.17■□□□□ 0.02
PRPF39-204ENST00000553605 RNF40O75150 1001 aa15.17■□□□□ 0.02
PRPF39-204ENST00000553605 LYPLA2O95372 231 aa15.17■□□□□ 0.02
PRPF39-204ENST00000553605 RARRES1P49788 294 aa15.17■□□□□ 0.02
PRPF39-204ENST00000553605 SOX4Q06945 474 aaPredicted RBP15.17■□□□□ 0.02
PRPF39-204ENST00000553605 KRT32Q14532 448 aa15.17■□□□□ 0.02
PRPF39-204ENST00000553605 MAPK6Q16659 721 aa15.17■□□□□ 0.02
PRPF39-204ENST00000553605 COL28A1Q2UY09 1125 aa15.17■□□□□ 0.02
PRPF39-204ENST00000553605 EEF1DP3Q658K8 133 aa15.17■□□□□ 0.02
PRPF39-204ENST00000553605 KRT25Q7Z3Z0 450 aa15.17■□□□□ 0.02
PRPF39-204ENST00000553605 DAGLBQ8NCG7 672 aa15.17■□□□□ 0.02
PRPF39-204ENST00000553605 BPIFB1Q8TDL5 484 aa15.17■□□□□ 0.02
PRPF39-204ENST00000553605 EIF2AK1Q9BQI3 630 aaKnown RBP15.17■□□□□ 0.02
PRPF39-204ENST00000553605 C2orf40Q9H1Z8 148 aa15.17■□□□□ 0.02
PRPF39-204ENST00000553605 THG1LQ9NWX6 298 aaKnown RBP15.17■□□□□ 0.02
PRPF39-204ENST00000553605 EBF1Q9UH73 591 aa15.17■□□□□ 0.02
PRPF39-204ENST00000553605 YIPF1Q9Y548 306 aa15.17■□□□□ 0.02
PRPF39-204ENST00000553605 SPAARA0A1B0GVQ0 90 aa15.16■□□□□ 0.02
PRPF39-204ENST00000553605 EIF4E1BA6NMX2 242 aaKnown RBP15.16■□□□□ 0.02
PRPF39-204ENST00000553605 ACKR2O00590 384 aa15.16■□□□□ 0.02
PRPF39-204ENST00000553605 PODXLO00592 558 aa15.16■□□□□ 0.02
PRPF39-204ENST00000553605 TRDMT1O14717 391 aaKnown RBP15.16■□□□□ 0.02
PRPF39-204ENST00000553605 CCNT1O60563 726 aaKnown RBP15.16■□□□□ 0.02
PRPF39-204ENST00000553605 SEC24BO95487 1268 aa15.16■□□□□ 0.02
PRPF39-204ENST00000553605 APBB3O95704 486 aa15.16■□□□□ 0.02
PRPF39-204ENST00000553605 EGFP01133 1207 aa15.16■□□□□ 0.02
PRPF39-204ENST00000553605 CPA1P15085 419 aa15.16■□□□□ 0.02
PRPF39-204ENST00000553605 CPB1P15086 417 aa15.16■□□□□ 0.02
PRPF39-204ENST00000553605 GCFC2P16383 781 aaKnown RBP15.16■□□□□ 0.02
PRPF39-204ENST00000553605 RDXP35241 583 aaKnown RBP15.16■□□□□ 0.02
PRPF39-204ENST00000553605 SIM1P81133 766 aaPredicted RBP15.16■□□□□ 0.02
PRPF39-204ENST00000553605 PLD1Q13393 1074 aa15.16■□□□□ 0.02
PRPF39-204ENST00000553605 NPY5RQ15761 445 aa15.16■□□□□ 0.02
PRPF39-204ENST00000553605 DCAF4L1Q3SXM0 396 aa15.16■□□□□ 0.02
PRPF39-204ENST00000553605 PMS2CLQ68D20 193 aa15.16■□□□□ 0.02
PRPF39-204ENST00000553605 GALNT17Q6IS24 598 aa15.16■□□□□ 0.02
PRPF39-204ENST00000553605 ZNF280DQ6N043 979 aa15.16■□□□□ 0.02
PRPF39-204ENST00000553605 HSD17B14Q9BPX1 270 aa15.16■□□□□ 0.02
PRPF39-204ENST00000553605 ATXN3LQ9H3M9 355 aa15.16■□□□□ 0.02
PRPF39-204ENST00000553605 INVSQ9Y283 1065 aa15.16■□□□□ 0.02
PRPF39-204ENST00000553605 NUB1Q9Y5A7 615 aa15.16■□□□□ 0.02
PRPF39-204ENST00000553605 IGSF10Q6WRI0 2623 aa15.16■□□□□ 0.02
PRPF39-204ENST00000553605 KIF26AQ9ULI4 1882 aaPredicted RBP15.15■□□□□ 0.02
PRPF39-204ENST00000553605 H0Y626 953 aa15.15■□□□□ 0.02
PRPF39-204ENST00000553605 USO1O60763 962 aaKnown RBP15.15■□□□□ 0.02
PRPF39-204ENST00000553605 TRIM16O95361 564 aa15.15■□□□□ 0.02
PRPF39-204ENST00000553605 LIG1P18858 919 aa15.15■□□□□ 0.02
PRPF39-204ENST00000553605 EPHB3P54753 998 aa15.15■□□□□ 0.02
PRPF39-204ENST00000553605 GPR158Q5T848 1215 aa15.15■□□□□ 0.02
PRPF39-204ENST00000553605 SYT13Q7L8C5 426 aa15.15■□□□□ 0.02
PRPF39-204ENST00000553605 CYP2U1Q7Z449 544 aa15.15■□□□□ 0.02
PRPF39-204ENST00000553605 NEK8Q86SG6 692 aa15.15■□□□□ 0.02
PRPF39-204ENST00000553605 C11orf74Q86VG3 221 aa15.15■□□□□ 0.02
PRPF39-204ENST00000553605 TRIM22Q8IYM9 498 aa15.15■□□□□ 0.02
PRPF39-204ENST00000553605 PIGOQ8TEQ8 1089 aa15.15■□□□□ 0.02
PRPF39-204ENST00000553605 BBC3Q96PG8 261 aaPredicted RBP15.15■□□□□ 0.02
PRPF39-204ENST00000553605 DNAJC25Q9H1X3 360 aa15.15■□□□□ 0.02
PRPF39-204ENST00000553605 GKN1Q9NS71 199 aa15.15■□□□□ 0.02
PRPF39-204ENST00000553605 SLC38A7Q9NVC3 462 aa15.15■□□□□ 0.02
PRPF39-204ENST00000553605 DAXXQ9UER7 740 aaPredicted RBP15.15■□□□□ 0.02
PRPF39-204ENST00000553605 ATG2BQ96BY7 2078 aa15.15■□□□□ 0.02
PRPF39-204ENST00000553605 NUP205Q92621 2012 aa15.14■□□□□ 0.01
PRPF39-204ENST00000553605 A0A087WWV3 80 aa15.14■□□□□ 0.01
PRPF39-204ENST00000553605 CCDC194A0A1B0GVG4 234 aa15.14■□□□□ 0.01
PRPF39-204ENST00000553605 BAG4O95429 457 aaKnown RBP15.14■□□□□ 0.01
PRPF39-204ENST00000553605 EDN1P05305 212 aa15.14■□□□□ 0.01
PRPF39-204ENST00000553605 ALDH1A3P47895 512 aa15.14■□□□□ 0.01
PRPF39-204ENST00000553605 MCM2P49736 904 aa15.14■□□□□ 0.01
PRPF39-204ENST00000553605 DGKEP52429 567 aa15.14■□□□□ 0.01
PRPF39-204ENST00000553605 CCT2P78371 535 aaKnown RBP15.14■□□□□ 0.01
PRPF39-204ENST00000553605 SSRP1Q08945 709 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms