RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 MPP5Q8N3R9 675 aa6.7□□□□□ -1.34
SCFD1-208ENST00000553278 Q8N3U1 123 aa6.7□□□□□ -1.34
SCFD1-208ENST00000553278 VGLL2Q8N8G2 317 aa6.7□□□□□ -1.34
SCFD1-208ENST00000553278 DCBLD1Q8N8Z6 715 aa6.7□□□□□ -1.34
SCFD1-208ENST00000553278 GLIS1Q8NBF1 620 aa6.7□□□□□ -1.34
SCFD1-208ENST00000553278 PCYOX1LQ8NBM8 494 aa6.7□□□□□ -1.34
SCFD1-208ENST00000553278 REPS2Q8NFH8 660 aa6.7□□□□□ -1.34
SCFD1-208ENST00000553278 STT3BQ8TCJ2 826 aa6.7□□□□□ -1.34
SCFD1-208ENST00000553278 ERP27Q96DN0 273 aa6.7□□□□□ -1.34
SCFD1-208ENST00000553278 SNX27Q96L92 541 aa6.7□□□□□ -1.34
SCFD1-208ENST00000553278 KATNAL1Q9BW62 490 aa6.7□□□□□ -1.34
SCFD1-208ENST00000553278 SLC6A17Q9H1V8 727 aa6.7□□□□□ -1.34
SCFD1-208ENST00000553278 CHST8Q9H2A9 424 aa6.7□□□□□ -1.34
SCFD1-208ENST00000553278 BRD9Q9H8M2 597 aa6.7□□□□□ -1.34
SCFD1-208ENST00000553278 SAYSD1Q9NPB0 183 aa6.7□□□□□ -1.34
SCFD1-208ENST00000553278 TBC1D22BQ9NU19 505 aa6.7□□□□□ -1.34
SCFD1-208ENST00000553278 GGA3Q9NZ52 723 aa6.7□□□□□ -1.34
SCFD1-208ENST00000553278 CLIC5Q9NZA1 410 aa6.7□□□□□ -1.34
SCFD1-208ENST00000553278 RGL1Q9NZL6 768 aa6.7□□□□□ -1.34
SCFD1-208ENST00000553278 IGSF9Q9P2J2 1179 aa6.7□□□□□ -1.34
SCFD1-208ENST00000553278 RGS17Q9UGC6 210 aaPredicted RBP6.7□□□□□ -1.34
SCFD1-208ENST00000553278 CTNND2Q9UQB3 1225 aa6.7□□□□□ -1.34
SCFD1-208ENST00000553278 A6NLC8 198 aa6.69□□□□□ -1.34
SCFD1-208ENST00000553278 MYO1CO00159 1063 aa6.69□□□□□ -1.34
SCFD1-208ENST00000553278 COBLO75128 1261 aa6.69□□□□□ -1.34
SCFD1-208ENST00000553278 CYP7B1O75881 506 aa6.69□□□□□ -1.34
SCFD1-208ENST00000553278 SOAT2O75908 522 aa6.69□□□□□ -1.34
SCFD1-208ENST00000553278 ITGA2BP08514 1039 aa6.69□□□□□ -1.34
SCFD1-208ENST00000553278 TXNP10599 105 aaKnown RBP6.69□□□□□ -1.34
SCFD1-208ENST00000553278 IL1R1P14778 569 aa6.69□□□□□ -1.34
SCFD1-208ENST00000553278 FPR1P21462 350 aa6.69□□□□□ -1.34
SCFD1-208ENST00000553278 GABRB3P28472 473 aa6.69□□□□□ -1.34
SCFD1-208ENST00000553278 PHKA1P46020 1223 aa6.69□□□□□ -1.34
SCFD1-208ENST00000553278 STAT5BP51692 787 aa6.69□□□□□ -1.34
SCFD1-208ENST00000553278 COPAP53621 1224 aa6.69□□□□□ -1.34
SCFD1-208ENST00000553278 YBX1P67809 324 aaKnown RBP6.69□□□□□ -1.34
SCFD1-208ENST00000553278 DUSP2Q05923 314 aa6.69□□□□□ -1.34
SCFD1-208ENST00000553278 SP140Q13342 867 aa6.69□□□□□ -1.34
SCFD1-208ENST00000553278 EFR3AQ14156 821 aa6.69□□□□□ -1.34
SCFD1-208ENST00000553278 EIF4HQ15056 248 aaKnown RBP6.69□□□□□ -1.34
SCFD1-208ENST00000553278 FAM110CQ1W6H9 321 aa6.69□□□□□ -1.34
SCFD1-208ENST00000553278 C2CD5Q86YS7 1000 aa6.69□□□□□ -1.34
SCFD1-208ENST00000553278 LILRA3Q8N6C8 439 aaPredicted RBP6.69□□□□□ -1.34
SCFD1-208ENST00000553278 FBXO18Q8NFZ0 1043 aa6.69□□□□□ -1.34
SCFD1-208ENST00000553278 OTUD7AQ8TE49 926 aaPredicted RBP6.69□□□□□ -1.34
SCFD1-208ENST00000553278 PRPF18Q99633 342 aaKnown RBP6.69□□□□□ -1.34
SCFD1-208ENST00000553278 PACSIN1Q9BY11 444 aa6.69□□□□□ -1.34
SCFD1-208ENST00000553278 ALG13Q9NP73 1137 aaKnown RBP6.69□□□□□ -1.34
SCFD1-208ENST00000553278 BLOC1S4Q9NUP1 217 aa6.69□□□□□ -1.34
SCFD1-208ENST00000553278 USP40Q9NVE5 1235 aa6.69□□□□□ -1.34
SCFD1-208ENST00000553278 RLIMQ9NVW2 624 aa6.69□□□□□ -1.34
SCFD1-208ENST00000553278 HERC5Q9UII4 1024 aaKnown RBP6.69□□□□□ -1.34
SCFD1-208ENST00000553278 CROTQ9UKG9 612 aa6.69□□□□□ -1.34
SCFD1-208ENST00000553278 ANGEL1Q9UNK9 670 aaKnown RBP6.69□□□□□ -1.34
SCFD1-208ENST00000553278 B4E171 279 aa6.68□□□□□ -1.34
SCFD1-208ENST00000553278 K7ENM7 598 aa6.68□□□□□ -1.34
SCFD1-208ENST00000553278 GRM6O15303 877 aa6.68□□□□□ -1.34
SCFD1-208ENST00000553278 HOXC11O43248 304 aaPredicted RBP6.68□□□□□ -1.34
SCFD1-208ENST00000553278 RASSF9O75901 435 aa6.68□□□□□ -1.34
SCFD1-208ENST00000553278 INMTO95050 263 aa6.68□□□□□ -1.34
SCFD1-208ENST00000553278 TNFRSF6BO95407 300 aa6.68□□□□□ -1.34
SCFD1-208ENST00000553278 RARBP10826 455 aa6.68□□□□□ -1.34
SCFD1-208ENST00000553278 IL1R2P27930 398 aa6.68□□□□□ -1.34
SCFD1-208ENST00000553278 TSPAN7P41732 249 aa6.68□□□□□ -1.34
SCFD1-208ENST00000553278 KCNQ1P51787 676 aa6.68□□□□□ -1.34
SCFD1-208ENST00000553278 ITGA1P56199 1179 aa6.68□□□□□ -1.34
SCFD1-208ENST00000553278 TLE2Q04725 743 aa6.68□□□□□ -1.34
SCFD1-208ENST00000553278 PRKG2Q13237 762 aa6.68□□□□□ -1.34
SCFD1-208ENST00000553278 PLCL1Q15111 1095 aa6.68□□□□□ -1.34
SCFD1-208ENST00000553278 TARBP2Q15633 366 aaKnown RBP6.68□□□□□ -1.34
SCFD1-208ENST00000553278 LIN54Q6MZP7 749 aa6.68□□□□□ -1.34
SCFD1-208ENST00000553278 USP17L6PQ6QN14 398 aa6.68□□□□□ -1.34
SCFD1-208ENST00000553278 KLHL17Q6TDP4 642 aa6.68□□□□□ -1.34
SCFD1-208ENST00000553278 ZNF572Q7Z3I7 529 aaPredicted RBP6.68□□□□□ -1.34
SCFD1-208ENST00000553278 RTKN2Q8IZC4 609 aa6.68□□□□□ -1.34
SCFD1-208ENST00000553278 DNAJC5GQ8N7S2 189 aa6.68□□□□□ -1.34
SCFD1-208ENST00000553278 PLA2G15Q8NCC3 412 aa6.68□□□□□ -1.34
SCFD1-208ENST00000553278 IL17RDQ8NFM7 739 aa6.68□□□□□ -1.34
SCFD1-208ENST00000553278 ZNF384Q8TF68 577 aa6.68□□□□□ -1.34
SCFD1-208ENST00000553278 MAELQ96JY0 434 aaKnown RBP6.68□□□□□ -1.34
SCFD1-208ENST00000553278 ZSWIM3Q96MP5 696 aa6.68□□□□□ -1.34
SCFD1-208ENST00000553278 JMJD4Q9H9V9 463 aa6.68□□□□□ -1.34
SCFD1-208ENST00000553278 IRAK4Q9NWZ3 460 aa6.68□□□□□ -1.34
SCFD1-208ENST00000553278 ING3Q9NXR8 418 aa6.68□□□□□ -1.34
SCFD1-208ENST00000553278 SRP68Q9UHB9 627 aaKnown RBP6.68□□□□□ -1.34
SCFD1-208ENST00000553278 ASAP1Q9ULH1 1129 aa6.68□□□□□ -1.34
SCFD1-208ENST00000553278 PLA2G2DQ9UNK4 145 aa6.68□□□□□ -1.34
SCFD1-208ENST00000553278 SLC45A1Q9Y2W3 748 aa6.68□□□□□ -1.34
SCFD1-208ENST00000553278 A0A0B4J269 797 aa6.67□□□□□ -1.34
SCFD1-208ENST00000553278 KLHL18O94889 574 aa6.67□□□□□ -1.34
SCFD1-208ENST00000553278 KNG1P01042 644 aa6.67□□□□□ -1.34
SCFD1-208ENST00000553278 HMGCRP04035 888 aa6.67□□□□□ -1.34
SCFD1-208ENST00000553278 ITGB2P05107 769 aa6.67□□□□□ -1.34
SCFD1-208ENST00000553278 GJB1P08034 283 aa6.67□□□□□ -1.34
SCFD1-208ENST00000553278 KIR2DL3P43628 341 aa6.67□□□□□ -1.34
SCFD1-208ENST00000553278 ALDH1A3P47895 512 aa6.67□□□□□ -1.34
SCFD1-208ENST00000553278 POU5F1Q01860 360 aaKnown RBP6.67□□□□□ -1.34
SCFD1-208ENST00000553278 ADAM9Q13443 819 aa6.67□□□□□ -1.34
SCFD1-208ENST00000553278 TRPC3Q13507 836 aa6.67□□□□□ -1.34
SCFD1-208ENST00000553278 NKAPLQ5M9Q1 402 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms