RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 ADPGKQ9BRR6 497 aa14.2□□□□□ -0.14
VPS29-211ENST00000553128 ADAM33Q9BZ11 813 aa14.2□□□□□ -0.14
VPS29-211ENST00000553128 CRISPLD1Q9H336 500 aa14.2□□□□□ -0.14
VPS29-211ENST00000553128 BAG4O95429 457 aaKnown RBP14.19□□□□□ -0.14
VPS29-211ENST00000553128 SPATA31C1P0DKV0 1188 aa14.19□□□□□ -0.14
VPS29-211ENST00000553128 ATP2B1P20020 1258 aa14.19□□□□□ -0.14
VPS29-211ENST00000553128 HSPA4P34932 840 aa14.19□□□□□ -0.14
VPS29-211ENST00000553128 CTXN3Q4LDR2 81 aa14.19□□□□□ -0.14
VPS29-211ENST00000553128 BMP2KLQ5H9B9 411 aa14.19□□□□□ -0.14
VPS29-211ENST00000553128 SH3PXD2AQ5TCZ1 1133 aa14.19□□□□□ -0.14
VPS29-211ENST00000553128 TPGS2Q68CL5 300 aa14.19□□□□□ -0.14
VPS29-211ENST00000553128 LRSAM1Q6UWE0 723 aa14.19□□□□□ -0.14
VPS29-211ENST00000553128 ALKAL1Q6UXT8 129 aa14.19□□□□□ -0.14
VPS29-211ENST00000553128 ARID3BQ8IVW6 561 aaPredicted RBP14.19□□□□□ -0.14
VPS29-211ENST00000553128 C18orf25Q96B23 403 aaPredicted RBP14.19□□□□□ -0.14
VPS29-211ENST00000553128 EDEM2Q9BV94 578 aa14.19□□□□□ -0.14
VPS29-211ENST00000553128 DNAJC25Q9H1X3 360 aa14.19□□□□□ -0.14
VPS29-211ENST00000553128 VPS45Q9NRW7 570 aa14.19□□□□□ -0.14
VPS29-211ENST00000553128 AFF4Q9UHB7 1163 aaKnown RBP14.19□□□□□ -0.14
VPS29-211ENST00000553128 PCDHA12Q9UN75 941 aa14.19□□□□□ -0.14
VPS29-211ENST00000553128 YIPF1Q9Y548 306 aa14.19□□□□□ -0.14
VPS29-211ENST00000553128 PCDHGA5Q9Y5G8 931 aa14.19□□□□□ -0.14
VPS29-211ENST00000553128 TRIP11Q15643 1979 aa14.19□□□□□ -0.14
VPS29-211ENST00000553128 EML5Q05BV3 1969 aa14.18□□□□□ -0.14
VPS29-211ENST00000553128 SPAG17Q6Q759 2223 aa14.18□□□□□ -0.14
VPS29-211ENST00000553128 H7C4K7 107 aa14.18□□□□□ -0.14
VPS29-211ENST00000553128 CPLX1O14810 134 aa14.18□□□□□ -0.14
VPS29-211ENST00000553128 SYN3O14994 580 aa14.18□□□□□ -0.14
VPS29-211ENST00000553128 DCLK1O15075 740 aa14.18□□□□□ -0.14
VPS29-211ENST00000553128 MEFVO15553 781 aaPredicted RBP14.18□□□□□ -0.14
VPS29-211ENST00000553128 OR4Q2P0C623 313 aa14.18□□□□□ -0.14
VPS29-211ENST00000553128 OSTNP61366 133 aa14.18□□□□□ -0.14
VPS29-211ENST00000553128 CACNB1Q02641 598 aaPredicted RBP14.18□□□□□ -0.14
VPS29-211ENST00000553128 NR5A1Q13285 461 aa14.18□□□□□ -0.14
VPS29-211ENST00000553128 DCAF4L1Q3SXM0 396 aa14.18□□□□□ -0.14
VPS29-211ENST00000553128 PLK5Q496M5 336 aa14.18□□□□□ -0.14
VPS29-211ENST00000553128 XKR4Q5GH76 650 aa14.18□□□□□ -0.14
VPS29-211ENST00000553128 C1orf228Q6PIY5 440 aa14.18□□□□□ -0.14
VPS29-211ENST00000553128 FAM200AQ8TCP9 573 aa14.18□□□□□ -0.14
VPS29-211ENST00000553128 E2F7Q96AV8 911 aa14.18□□□□□ -0.14
VPS29-211ENST00000553128 CHFRQ96EP1 664 aa14.18□□□□□ -0.14
VPS29-211ENST00000553128 ZC3H10Q96K80 434 aaKnown RBP14.18□□□□□ -0.14
VPS29-211ENST00000553128 SCNM1Q9BWG6 230 aa14.18□□□□□ -0.14
VPS29-211ENST00000553128 DUSP15Q9H1R2 295 aaPredicted RBP14.18□□□□□ -0.14
VPS29-211ENST00000553128 C2orf40Q9H1Z8 148 aa14.18□□□□□ -0.14
VPS29-211ENST00000553128 TTC12Q9H892 705 aaPredicted RBP14.18□□□□□ -0.14
VPS29-211ENST00000553128 ITPR1Q14643 2758 aa14.18□□□□□ -0.14
VPS29-211ENST00000553128 PRAMEF12O95522 483 aa14.17□□□□□ -0.14
VPS29-211ENST00000553128 TXKP42681 527 aa14.17□□□□□ -0.14
VPS29-211ENST00000553128 ATF7IP2Q5U623 682 aa14.17□□□□□ -0.14
VPS29-211ENST00000553128 GAREM2Q75VX8 874 aa14.17□□□□□ -0.14
VPS29-211ENST00000553128 FAM177A1Q8N128 213 aaPredicted RBP14.17□□□□□ -0.14
VPS29-211ENST00000553128 SYNPOQ8N3V7 929 aa14.17□□□□□ -0.14
VPS29-211ENST00000553128 LEMD2Q8NC56 503 aa14.17□□□□□ -0.14
VPS29-211ENST00000553128 MCPH1Q8NEM0 835 aa14.17□□□□□ -0.14
VPS29-211ENST00000553128 PGLYRP2Q96PD5 576 aa14.17□□□□□ -0.14
VPS29-211ENST00000553128 GPR88Q9GZN0 384 aa14.17□□□□□ -0.14
VPS29-211ENST00000553128 LHX6Q9UPM6 363 aa14.17□□□□□ -0.14
VPS29-211ENST00000553128 KIF26AQ9ULI4 1882 aaPredicted RBP14.16□□□□□ -0.14
VPS29-211ENST00000553128 CCDC163A0A0D9SF12 145 aa14.16□□□□□ -0.14
VPS29-211ENST00000553128 LNP1A1A4G5 178 aa14.16□□□□□ -0.14
VPS29-211ENST00000553128 SOBPA7XYQ1 873 aa14.16□□□□□ -0.14
VPS29-211ENST00000553128 MED24O75448 989 aa14.16□□□□□ -0.14
VPS29-211ENST00000553128 CPB1P15086 417 aa14.16□□□□□ -0.14
VPS29-211ENST00000553128 CALCRLQ16602 461 aa14.16□□□□□ -0.14
VPS29-211ENST00000553128 FSTL4Q6MZW2 842 aa14.16□□□□□ -0.14
VPS29-211ENST00000553128 ZNF280DQ6N043 979 aa14.16□□□□□ -0.14
VPS29-211ENST00000553128 KIAA1211LQ6NV74 962 aa14.16□□□□□ -0.14
VPS29-211ENST00000553128 CATSPER3Q86XQ3 398 aa14.16□□□□□ -0.14
VPS29-211ENST00000553128 BEST2Q8NFU1 509 aa14.16□□□□□ -0.14
VPS29-211ENST00000553128 DEPTORQ8TB45 409 aa14.16□□□□□ -0.14
VPS29-211ENST00000553128 ZCCHC14Q8WYQ9 949 aaKnown RBP14.16□□□□□ -0.14
VPS29-211ENST00000553128 DDX12PQ92771 950 aa14.16□□□□□ -0.14
VPS29-211ENST00000553128 TNFRSF25Q93038 417 aa14.16□□□□□ -0.14
VPS29-211ENST00000553128 SUSD3Q96L08 255 aa14.16□□□□□ -0.14
VPS29-211ENST00000553128 HHIPQ96QV1 700 aa14.16□□□□□ -0.14
VPS29-211ENST00000553128 TMEM209Q96SK2 561 aa14.16□□□□□ -0.14
VPS29-211ENST00000553128 NAP1L4Q99733 375 aaKnown RBP14.16□□□□□ -0.14
VPS29-211ENST00000553128 SMG9Q9H0W8 520 aaKnown RBP14.16□□□□□ -0.14
VPS29-211ENST00000553128 CDT1Q9H211 546 aa14.16□□□□□ -0.14
VPS29-211ENST00000553128 NUB1Q9Y5A7 615 aa14.16□□□□□ -0.14
VPS29-211ENST00000553128 OTOL1A6NHN0 477 aaPredicted RBP14.15□□□□□ -0.14
VPS29-211ENST00000553128 CDC45O75419 566 aa14.15□□□□□ -0.14
VPS29-211ENST00000553128 SOAT2O75908 522 aa14.15□□□□□ -0.14
VPS29-211ENST00000553128 AKAP3O75969 853 aa14.15□□□□□ -0.14
VPS29-211ENST00000553128 XRCC6P12956 609 aaKnown RBP eCLIP14.15□□□□□ -0.14
VPS29-211ENST00000553128 GRM5P41594 1212 aa14.15□□□□□ -0.14
VPS29-211ENST00000553128 NAMPTP43490 491 aa14.15□□□□□ -0.14
VPS29-211ENST00000553128 CREB5Q02930 508 aa14.15□□□□□ -0.14
VPS29-211ENST00000553128 DUSP4Q13115 394 aa14.15□□□□□ -0.14
VPS29-211ENST00000553128 ARHGAP29Q52LW3 1261 aa14.15□□□□□ -0.14
VPS29-211ENST00000553128 TMEM196Q5HYL7 178 aa14.15□□□□□ -0.14
VPS29-211ENST00000553128 NAIF1Q69YI7 327 aaPredicted RBP14.15□□□□□ -0.14
VPS29-211ENST00000553128 PADI6Q6TGC4 694 aa14.15□□□□□ -0.14
VPS29-211ENST00000553128 RUFY3Q7L099 469 aa14.15□□□□□ -0.14
VPS29-211ENST00000553128 TTC9BQ8N6N2 239 aa14.15□□□□□ -0.14
VPS29-211ENST00000553128 ZNF274Q96GC6 653 aaPredicted RBP14.15□□□□□ -0.14
VPS29-211ENST00000553128 TBC1D32Q96NH3 1257 aa14.15□□□□□ -0.14
VPS29-211ENST00000553128 FBRSL1Q9HCM7 1045 aaKnown RBP14.15□□□□□ -0.14
VPS29-211ENST00000553128 SLC8A2Q9UPR5 921 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms