RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 BHMT2Q9H2M3 363 aa4.84□□□□□ -1.63
USP44-207ENST00000552237 PCDH12Q9NPG4 1184 aa4.84□□□□□ -1.63
USP44-207ENST00000552237 DPP7Q9UHL4 492 aa4.84□□□□□ -1.63
USP44-207ENST00000552237 ST3GAL5Q9UNP4 418 aa4.84□□□□□ -1.63
USP44-207ENST00000552237 WASHC2AQ641Q2 1341 aa4.83□□□□□ -1.64
USP44-207ENST00000552237 LINC00473A8K010 186 aa4.83□□□□□ -1.64
USP44-207ENST00000552237 TEX33O43247 280 aa4.83□□□□□ -1.64
USP44-207ENST00000552237 CHRM2P08172 466 aa4.83□□□□□ -1.64
USP44-207ENST00000552237 IBSPP21815 317 aaPredicted RBP4.83□□□□□ -1.64
USP44-207ENST00000552237 CCKBRP32239 447 aa4.83□□□□□ -1.64
USP44-207ENST00000552237 POLGP54098 1239 aaPredicted RBP4.83□□□□□ -1.64
USP44-207ENST00000552237 CCT2P78371 535 aaKnown RBP4.83□□□□□ -1.64
USP44-207ENST00000552237 PTPROQ16827 1216 aa4.83□□□□□ -1.64
USP44-207ENST00000552237 TOR2AQ5JU69 321 aa4.83□□□□□ -1.64
USP44-207ENST00000552237 MORN5Q5VZ52 161 aa4.83□□□□□ -1.64
USP44-207ENST00000552237 ZNF517Q6ZMY9 492 aaPredicted RBP4.83□□□□□ -1.64
USP44-207ENST00000552237 Q6ZVL8 140 aa4.83□□□□□ -1.64
USP44-207ENST00000552237 RASAL3Q86YV0 1011 aa4.83□□□□□ -1.64
USP44-207ENST00000552237 PRPF38AQ8NAV1 312 aaKnown RBP4.83□□□□□ -1.64
USP44-207ENST00000552237 ZCRB1Q8TBF4 217 aaKnown RBP4.83□□□□□ -1.64
USP44-207ENST00000552237 SEMA4CQ9C0C4 833 aa4.83□□□□□ -1.64
USP44-207ENST00000552237 TMEM140Q9NV12 185 aa4.83□□□□□ -1.64
USP44-207ENST00000552237 INTS13Q9NVM9 706 aa4.83□□□□□ -1.64
USP44-207ENST00000552237 FAM30AQ9NZY2 134 aa4.83□□□□□ -1.64
USP44-207ENST00000552237 HSFX1Q9UBD0 423 aa4.83□□□□□ -1.64
USP44-207ENST00000552237 CDHR4A6H8M9 788 aa4.82□□□□□ -1.64
USP44-207ENST00000552237 GCOM1H8Y6P7 765 aaPredicted RBP4.82□□□□□ -1.64
USP44-207ENST00000552237 EPHB2P29323 1055 aa4.82□□□□□ -1.64
USP44-207ENST00000552237 NOMO3P69849 1222 aa4.82□□□□□ -1.64
USP44-207ENST00000552237 ITKQ08881 620 aa4.82□□□□□ -1.64
USP44-207ENST00000552237 NOMO1Q15155 1222 aa4.82□□□□□ -1.64
USP44-207ENST00000552237 NOMO2Q5JPE7 1267 aa4.82□□□□□ -1.64
USP44-207ENST00000552237 OTUD7BQ6GQQ9 843 aa4.82□□□□□ -1.64
USP44-207ENST00000552237 ZNF782Q6ZMW2 699 aaPredicted RBP4.82□□□□□ -1.64
USP44-207ENST00000552237 NECAB2Q7Z6G3 386 aa4.82□□□□□ -1.64
USP44-207ENST00000552237 TECPR1Q7Z6L1 1165 aa4.82□□□□□ -1.64
USP44-207ENST00000552237 RAX2Q96IS3 184 aa4.82□□□□□ -1.64
USP44-207ENST00000552237 PGBD1Q96JS3 809 aa4.82□□□□□ -1.64
USP44-207ENST00000552237 PUS7LQ9H0K6 701 aaKnown RBP4.82□□□□□ -1.64
USP44-207ENST00000552237 LDAHQ9H6V9 325 aa4.82□□□□□ -1.64
USP44-207ENST00000552237 DNAJC28Q9NX36 388 aa4.82□□□□□ -1.64
USP44-207ENST00000552237 AJAP1Q9UKB5 411 aaPredicted RBP4.82□□□□□ -1.64
USP44-207ENST00000552237 ADM5C9JUS6 153 aa4.81□□□□□ -1.64
USP44-207ENST00000552237 H3BNC9 293 aa4.81□□□□□ -1.64
USP44-207ENST00000552237 WNT10BO00744 389 aa4.81□□□□□ -1.64
USP44-207ENST00000552237 PROM1O43490 865 aa4.81□□□□□ -1.64
USP44-207ENST00000552237 MOSPD3O75425 235 aa4.81□□□□□ -1.64
USP44-207ENST00000552237 KATNA1O75449 491 aa4.81□□□□□ -1.64
USP44-207ENST00000552237 CD1AP06126 327 aa4.81□□□□□ -1.64
USP44-207ENST00000552237 GPR3P46089 330 aa4.81□□□□□ -1.64
USP44-207ENST00000552237 ERVK-21P61565 698 aa4.81□□□□□ -1.64
USP44-207ENST00000552237 MRPS9P82933 396 aaKnown RBP4.81□□□□□ -1.64
USP44-207ENST00000552237 SRSF2Q01130 221 aaKnown RBP4.81□□□□□ -1.64
USP44-207ENST00000552237 FPGSQ05932 587 aa4.81□□□□□ -1.64
USP44-207ENST00000552237 KLF1Q13351 362 aaPredicted RBP4.81□□□□□ -1.64
USP44-207ENST00000552237 CLUL1Q15846 466 aa4.81□□□□□ -1.64
USP44-207ENST00000552237 PREPLQ4J6C6 727 aaPredicted RBP4.81□□□□□ -1.64
USP44-207ENST00000552237 TSHZ1Q6ZSZ6 1077 aa4.81□□□□□ -1.64
USP44-207ENST00000552237 NEK8Q86SG6 692 aa4.81□□□□□ -1.64
USP44-207ENST00000552237 TBC1D15Q8TC07 691 aa4.81□□□□□ -1.64
USP44-207ENST00000552237 AUTS2Q8WXX7 1259 aa4.81□□□□□ -1.64
USP44-207ENST00000552237 MTMR8Q96EF0 704 aa4.81□□□□□ -1.64
USP44-207ENST00000552237 GPATCH3Q96I76 525 aa4.81□□□□□ -1.64
USP44-207ENST00000552237 CCDC8Q9H0W5 538 aaPredicted RBP4.81□□□□□ -1.64
USP44-207ENST00000552237 ANLNQ9NQW6 1124 aa4.81□□□□□ -1.64
USP44-207ENST00000552237 ZNF580Q9UK33 172 aa4.81□□□□□ -1.64
USP44-207ENST00000552237 ADAM21Q9UKJ8 722 aa4.81□□□□□ -1.64
USP44-207ENST00000552237 ZBTB21Q9ULJ3 1066 aa4.81□□□□□ -1.64
USP44-207ENST00000552237 NTN1O95631 604 aa4.8□□□□□ -1.64
USP44-207ENST00000552237 ELFN1P0C7U0 828 aa4.8□□□□□ -1.64
USP44-207ENST00000552237 OSMP13725 252 aa4.8□□□□□ -1.64
USP44-207ENST00000552237 MTHFD2P13995 350 aa4.8□□□□□ -1.64
USP44-207ENST00000552237 GUCY1A2P33402 732 aa4.8□□□□□ -1.64
USP44-207ENST00000552237 PLCD1P51178 756 aa4.8□□□□□ -1.64
USP44-207ENST00000552237 MTMR1Q13613 665 aa4.8□□□□□ -1.64
USP44-207ENST00000552237 PTPRRQ15256 657 aa4.8□□□□□ -1.64
USP44-207ENST00000552237 TXNRD1Q16881 649 aa4.8□□□□□ -1.64
USP44-207ENST00000552237 PGM2L1Q6PCE3 622 aa4.8□□□□□ -1.64
USP44-207ENST00000552237 CLNKQ7Z7G1 428 aa4.8□□□□□ -1.64
USP44-207ENST00000552237 AMOTL1Q8IY63 956 aa4.8□□□□□ -1.64
USP44-207ENST00000552237 SLC30A5Q8TAD4 765 aa4.8□□□□□ -1.64
USP44-207ENST00000552237 LPIN2Q92539 896 aa4.8□□□□□ -1.64
USP44-207ENST00000552237 MYOCQ99972 504 aa4.8□□□□□ -1.64
USP44-207ENST00000552237 GSTO2Q9H4Y5 243 aa4.8□□□□□ -1.64
USP44-207ENST00000552237 IFT122Q9HBG6 1241 aa4.8□□□□□ -1.64
USP44-207ENST00000552237 CCM2LQ9NUG4 571 aaPredicted RBP4.8□□□□□ -1.64
USP44-207ENST00000552237 SLC23A1Q9UHI7 598 aa4.8□□□□□ -1.64
USP44-207ENST00000552237 TRHDEQ9UKU6 1024 aa4.8□□□□□ -1.64
USP44-207ENST00000552237 RUVBL1Q9Y265 456 aaKnown RBP4.8□□□□□ -1.64
USP44-207ENST00000552237 BTBD3Q9Y2F9 522 aa4.8□□□□□ -1.64
USP44-207ENST00000552237 A0A1W2PS29 197 aa4.79□□□□□ -1.64
USP44-207ENST00000552237 ALG1L2C9J202 215 aa4.79□□□□□ -1.64
USP44-207ENST00000552237 MT-CO1P00395 513 aa4.79□□□□□ -1.64
USP44-207ENST00000552237 SNHG28P0DPA3 235 aa4.79□□□□□ -1.64
USP44-207ENST00000552237 FPR1P21462 350 aa4.79□□□□□ -1.64
USP44-207ENST00000552237 CERS1P27544 350 aa4.79□□□□□ -1.64
USP44-207ENST00000552237 FOXG1P55316 489 aaPredicted RBP4.79□□□□□ -1.64
USP44-207ENST00000552237 RPS7P62081 194 aaKnown RBP4.79□□□□□ -1.64
USP44-207ENST00000552237 MUM1Q2TAK8 710 aa4.79□□□□□ -1.64
USP44-207ENST00000552237 SEM1Q6ZVN7 128 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms