RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 TMEM121BQ9BXQ6 578 aaPredicted RBP16.78■□□□□ 0.28
CACNB3-220ENST00000551716 GPRC5CQ9NQ84 441 aa16.78■□□□□ 0.28
CACNB3-220ENST00000551716 GTSE1Q9NYZ3 720 aa16.78■□□□□ 0.28
CACNB3-220ENST00000551716 VWA8A3KMH1 1905 aa16.78■□□□□ 0.28
CACNB3-220ENST00000551716 PODXLO00592 558 aa16.77■□□□□ 0.28
CACNB3-220ENST00000551716 MARCKSP29966 332 aaPredicted RBP16.77■□□□□ 0.28
CACNB3-220ENST00000551716 NAMPTP43490 491 aa16.77■□□□□ 0.28
CACNB3-220ENST00000551716 PXNP49023 591 aaPredicted RBP16.77■□□□□ 0.28
CACNB3-220ENST00000551716 RING1Q06587 406 aa16.77■□□□□ 0.28
CACNB3-220ENST00000551716 KARSQ15046 597 aaKnown RBP16.77■□□□□ 0.28
CACNB3-220ENST00000551716 ITPRIPL2Q3MIP1 535 aa16.77■□□□□ 0.28
CACNB3-220ENST00000551716 XKR4Q5GH76 650 aa16.77■□□□□ 0.28
CACNB3-220ENST00000551716 PIK3AP1Q6ZUJ8 805 aa16.77■□□□□ 0.28
CACNB3-220ENST00000551716 ZCCHC14Q8WYQ9 949 aaKnown RBP16.77■□□□□ 0.28
CACNB3-220ENST00000551716 GATA6Q92908 595 aa16.77■□□□□ 0.28
CACNB3-220ENST00000551716 KIF12Q96FN5 646 aa16.77■□□□□ 0.28
CACNB3-220ENST00000551716 CCDC94Q9BW85 323 aaPredicted RBP16.77■□□□□ 0.28
CACNB3-220ENST00000551716 CCDC113Q9H0I3 377 aa16.77■□□□□ 0.28
CACNB3-220ENST00000551716 SMOC1Q9H4F8 434 aa16.77■□□□□ 0.28
CACNB3-220ENST00000551716 GOLGA2P5Q9HBQ8 144 aa16.77■□□□□ 0.28
CACNB3-220ENST00000551716 KCNJ14Q9UNX9 436 aa16.77■□□□□ 0.28
CACNB3-220ENST00000551716 ASB3Q9Y575 518 aa16.77■□□□□ 0.28
CACNB3-220ENST00000551716 SPEGQ15772 3267 aa16.77■□□□□ 0.27
CACNB3-220ENST00000551716 TICRRQ7Z2Z1 1910 aa16.76■□□□□ 0.27
CACNB3-220ENST00000551716 COL4A2P08572 1712 aa16.76■□□□□ 0.27
CACNB3-220ENST00000551716 A0A1W2PRU2 124 aa16.76■□□□□ 0.27
CACNB3-220ENST00000551716 GIPC1O14908 333 aa16.76■□□□□ 0.27
CACNB3-220ENST00000551716 CPB1P15086 417 aa16.76■□□□□ 0.27
CACNB3-220ENST00000551716 LIG1P18858 919 aa16.76■□□□□ 0.27
CACNB3-220ENST00000551716 WEE1P30291 646 aa16.76■□□□□ 0.27
CACNB3-220ENST00000551716 ALDH1A3P47895 512 aa16.76■□□□□ 0.27
CACNB3-220ENST00000551716 CREB5Q02930 508 aa16.76■□□□□ 0.27
CACNB3-220ENST00000551716 ARHGAP15Q53QZ3 475 aa16.76■□□□□ 0.27
CACNB3-220ENST00000551716 ATF7IP2Q5U623 682 aa16.76■□□□□ 0.27
CACNB3-220ENST00000551716 EEF1DP3Q658K8 133 aa16.76■□□□□ 0.27
CACNB3-220ENST00000551716 ALKAL1Q6UXT8 129 aa16.76■□□□□ 0.27
CACNB3-220ENST00000551716 C11orf74Q86VG3 221 aa16.76■□□□□ 0.27
CACNB3-220ENST00000551716 TTC8Q8TAM2 541 aa16.76■□□□□ 0.27
CACNB3-220ENST00000551716 EXOC4Q96A65 974 aa16.76■□□□□ 0.27
CACNB3-220ENST00000551716 ZNF274Q96GC6 653 aaPredicted RBP16.76■□□□□ 0.27
CACNB3-220ENST00000551716 SUSD3Q96L08 255 aa16.76■□□□□ 0.27
CACNB3-220ENST00000551716 NACC1Q96RE7 527 aa16.76■□□□□ 0.27
CACNB3-220ENST00000551716 SCNM1Q9BWG6 230 aa16.76■□□□□ 0.27
CACNB3-220ENST00000551716 TTC12Q9H892 705 aaPredicted RBP16.76■□□□□ 0.27
CACNB3-220ENST00000551716 TMEM9BQ9NQ34 198 aa16.76■□□□□ 0.27
CACNB3-220ENST00000551716 SNX14Q9Y5W7 946 aa16.76■□□□□ 0.27
CACNB3-220ENST00000551716 NCANO14594 1321 aa16.75■□□□□ 0.27
CACNB3-220ENST00000551716 BCLAF3A2AJT9 711 aaKnown RBP16.75■□□□□ 0.27
CACNB3-220ENST00000551716 KHNYNO15037 678 aaKnown RBP16.75■□□□□ 0.27
CACNB3-220ENST00000551716 CALCRLQ16602 461 aa16.75■□□□□ 0.27
CACNB3-220ENST00000551716 TMEM196Q5HYL7 178 aa16.75■□□□□ 0.27
CACNB3-220ENST00000551716 TCEAL6Q6IPX3 200 aa16.75■□□□□ 0.27
CACNB3-220ENST00000551716 BPIFB1Q8TDL5 484 aa16.75■□□□□ 0.27
CACNB3-220ENST00000551716 TCEAL3Q969E4 200 aa16.75■□□□□ 0.27
CACNB3-220ENST00000551716 COL26A1Q96A83 441 aa16.75■□□□□ 0.27
CACNB3-220ENST00000551716 LRRC3Q9BY71 257 aa16.75■□□□□ 0.27
CACNB3-220ENST00000551716 DUSP15Q9H1R2 295 aaPredicted RBP16.75■□□□□ 0.27
CACNB3-220ENST00000551716 NEUROG3Q9Y4Z2 214 aa16.75■□□□□ 0.27
CACNB3-220ENST00000551716 CDKL5O76039 1030 aa16.74■□□□□ 0.27
CACNB3-220ENST00000551716 KCNE1P15382 129 aa16.74■□□□□ 0.27
CACNB3-220ENST00000551716 SPINK2P20155 84 aa16.74■□□□□ 0.27
CACNB3-220ENST00000551716 HSPA4P34932 840 aa16.74■□□□□ 0.27
CACNB3-220ENST00000551716 GRM5P41594 1212 aa16.74■□□□□ 0.27
CACNB3-220ENST00000551716 SOX4Q06945 474 aaPredicted RBP16.74■□□□□ 0.27
CACNB3-220ENST00000551716 RNF19BQ6ZMZ0 732 aa16.74■□□□□ 0.27
CACNB3-220ENST00000551716 BEST2Q8NFU1 509 aa16.74■□□□□ 0.27
CACNB3-220ENST00000551716 ZFYVE19Q96K21 471 aa16.74■□□□□ 0.27
CACNB3-220ENST00000551716 IFT74Q96LB3 600 aa16.74■□□□□ 0.27
CACNB3-220ENST00000551716 AIFM3Q96NN9 605 aa16.74■□□□□ 0.27
CACNB3-220ENST00000551716 ATXN3LQ9H3M9 355 aa16.74■□□□□ 0.27
CACNB3-220ENST00000551716 ZMYM5Q9UJ78 669 aa16.74■□□□□ 0.27
CACNB3-220ENST00000551716 TNFSF13BQ9Y275 285 aa16.74■□□□□ 0.27
CACNB3-220ENST00000551716 YIPF1Q9Y548 306 aa16.74■□□□□ 0.27
CACNB3-220ENST00000551716 TRDMT1O14717 391 aaKnown RBP16.73■□□□□ 0.27
CACNB3-220ENST00000551716 OAZ2O95190 189 aa16.73■□□□□ 0.27
CACNB3-220ENST00000551716 CYP11B2P19099 503 aa16.73■□□□□ 0.27
CACNB3-220ENST00000551716 HOXC13P31276 330 aa16.73■□□□□ 0.27
CACNB3-220ENST00000551716 MCM4P33991 863 aa16.73■□□□□ 0.27
CACNB3-220ENST00000551716 FBXO43Q4G163 708 aa16.73■□□□□ 0.27
CACNB3-220ENST00000551716 ITIH5Q86UX2 942 aa16.73■□□□□ 0.27
CACNB3-220ENST00000551716 TMC8Q8IU68 726 aa16.73■□□□□ 0.27
CACNB3-220ENST00000551716 DDX12PQ92771 950 aa16.73■□□□□ 0.27
CACNB3-220ENST00000551716 ACAP3Q96P50 834 aa16.73■□□□□ 0.27
CACNB3-220ENST00000551716 LRRC3BQ96PB8 259 aa16.73■□□□□ 0.27
CACNB3-220ENST00000551716 TUFT1Q9NNX1 390 aa16.73■□□□□ 0.27
CACNB3-220ENST00000551716 EBF1Q9UH73 591 aa16.73■□□□□ 0.27
CACNB3-220ENST00000551716 PCDHB8Q9UN66 801 aa16.73■□□□□ 0.27
CACNB3-220ENST00000551716 USP20Q9Y2K6 914 aa16.73■□□□□ 0.27
CACNB3-220ENST00000551716 SPAG17Q6Q759 2223 aa16.73■□□□□ 0.27
CACNB3-220ENST00000551716 A0A087WWV3 80 aa16.72■□□□□ 0.27
CACNB3-220ENST00000551716 LNP1A1A4G5 178 aa16.72■□□□□ 0.27
CACNB3-220ENST00000551716 K7ERI5 159 aa16.72■□□□□ 0.27
CACNB3-220ENST00000551716 TAF4O00268 1085 aa16.72■□□□□ 0.27
CACNB3-220ENST00000551716 CDC45O75419 566 aa16.72■□□□□ 0.27
CACNB3-220ENST00000551716 DRD1P21728 446 aa16.72■□□□□ 0.27
CACNB3-220ENST00000551716 RDXP35241 583 aaKnown RBP16.72■□□□□ 0.27
CACNB3-220ENST00000551716 TXKP42681 527 aa16.72■□□□□ 0.27
CACNB3-220ENST00000551716 MCM2P49736 904 aa16.72■□□□□ 0.27
CACNB3-220ENST00000551716 YWHAHQ04917 246 aaPredicted RBP16.72■□□□□ 0.27
CACNB3-220ENST00000551716 TNK2Q07912 1038 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms