RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 C1orf162Q8NEQ5 155 aaPredicted RBP5.65□□□□□ -1.5
CCDC38-208ENST00000549876 DDB2Q92466 427 aa5.65□□□□□ -1.5
CCDC38-208ENST00000549876 C7orf25Q9BPX7 421 aa5.65□□□□□ -1.5
CCDC38-208ENST00000549876 MANSC1Q9H8J5 431 aa5.65□□□□□ -1.5
CCDC38-208ENST00000549876 ATP8A1Q9Y2Q0 1164 aa5.65□□□□□ -1.5
CCDC38-208ENST00000549876 MANSC4A6NHS7 340 aaPredicted RBP5.64□□□□□ -1.51
CCDC38-208ENST00000549876 PCDHGA12O60330 932 aa5.64□□□□□ -1.51
CCDC38-208ENST00000549876 FCER1AP12319 257 aa5.64□□□□□ -1.51
CCDC38-208ENST00000549876 ITPKBP27987 946 aa5.64□□□□□ -1.51
CCDC38-208ENST00000549876 SLC6A4P31645 630 aa5.64□□□□□ -1.51
CCDC38-208ENST00000549876 IARSP41252 1262 aaKnown RBP5.64□□□□□ -1.51
CCDC38-208ENST00000549876 SOX10P56693 466 aa5.64□□□□□ -1.51
CCDC38-208ENST00000549876 NBPF8Q3BBV2 869 aa5.64□□□□□ -1.51
CCDC38-208ENST00000549876 KAZNQ674X7 775 aa5.64□□□□□ -1.51
CCDC38-208ENST00000549876 PGM2L1Q6PCE3 622 aa5.64□□□□□ -1.51
CCDC38-208ENST00000549876 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.64□□□□□ -1.51
CCDC38-208ENST00000549876 NECAB2Q7Z6G3 386 aa5.64□□□□□ -1.51
CCDC38-208ENST00000549876 RHOT1Q8IXI2 618 aa5.64□□□□□ -1.51
CCDC38-208ENST00000549876 AMOTL1Q8IY63 956 aa5.64□□□□□ -1.51
CCDC38-208ENST00000549876 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.64□□□□□ -1.51
CCDC38-208ENST00000549876 SSH1Q8WYL5 1049 aa5.64□□□□□ -1.51
CCDC38-208ENST00000549876 SPC25Q9HBM1 224 aa5.64□□□□□ -1.51
CCDC38-208ENST00000549876 PCDHGA9Q9Y5G4 932 aaKnown RBP5.64□□□□□ -1.51
CCDC38-208ENST00000549876 PCDHGA8Q9Y5G5 932 aa5.64□□□□□ -1.51
CCDC38-208ENST00000549876 PCDHGA7Q9Y5G6 932 aa5.64□□□□□ -1.51
CCDC38-208ENST00000549876 PCDHGA6Q9Y5G7 932 aa5.64□□□□□ -1.51
CCDC38-208ENST00000549876 PCDHGA3Q9Y5H0 932 aa5.64□□□□□ -1.51
CCDC38-208ENST00000549876 AOX1Q06278 1338 aa5.64□□□□□ -1.51
CCDC38-208ENST00000549876 ORC4O43929 436 aa5.63□□□□□ -1.51
CCDC38-208ENST00000549876 NDUFS2O75306 463 aa5.63□□□□□ -1.51
CCDC38-208ENST00000549876 PRKCGP05129 697 aa5.63□□□□□ -1.51
CCDC38-208ENST00000549876 C5AR1P21730 350 aa5.63□□□□□ -1.51
CCDC38-208ENST00000549876 CTXN1P60606 82 aa5.63□□□□□ -1.51
CCDC38-208ENST00000549876 TARDBPQ13148 414 aaKnown RBP eCLIP5.63□□□□□ -1.51
CCDC38-208ENST00000549876 CLUL1Q15846 466 aa5.63□□□□□ -1.51
CCDC38-208ENST00000549876 TBC1D15Q8TC07 691 aa5.63□□□□□ -1.51
CCDC38-208ENST00000549876 TFAP2BQ92481 460 aa5.63□□□□□ -1.51
CCDC38-208ENST00000549876 RAB24Q969Q5 203 aa5.63□□□□□ -1.51
CCDC38-208ENST00000549876 FAXDC2Q96IV6 333 aa5.63□□□□□ -1.51
CCDC38-208ENST00000549876 KRTAP1-5Q9BYS1 174 aa5.63□□□□□ -1.51
CCDC38-208ENST00000549876 VSX1Q9NZR4 365 aaPredicted RBP5.63□□□□□ -1.51
CCDC38-208ENST00000549876 PCDHA13Q9Y5I0 950 aa5.63□□□□□ -1.51
CCDC38-208ENST00000549876 FZD9O00144 591 aa5.62□□□□□ -1.51
CCDC38-208ENST00000549876 KIAA0391O15091 583 aaKnown RBP5.62□□□□□ -1.51
CCDC38-208ENST00000549876 IGSF3O75054 1194 aa5.62□□□□□ -1.51
CCDC38-208ENST00000549876 SBK3P0C264 359 aa5.62□□□□□ -1.51
CCDC38-208ENST00000549876 GATA3P23771 443 aa5.62□□□□□ -1.51
CCDC38-208ENST00000549876 EDNRBP24530 442 aa5.62□□□□□ -1.51
CCDC38-208ENST00000549876 SSBP2P81877 361 aaPredicted RBP5.62□□□□□ -1.51
CCDC38-208ENST00000549876 PTPRRQ15256 657 aa5.62□□□□□ -1.51
CCDC38-208ENST00000549876 TSTD2Q5T7W7 516 aa5.62□□□□□ -1.51
CCDC38-208ENST00000549876 LPIN2Q92539 896 aa5.62□□□□□ -1.51
CCDC38-208ENST00000549876 FBXL20Q96IG2 436 aa5.62□□□□□ -1.51
CCDC38-208ENST00000549876 C11orf54Q9H0W9 315 aaPredicted RBP5.62□□□□□ -1.51
CCDC38-208ENST00000549876 INTS13Q9NVM9 706 aa5.62□□□□□ -1.51
CCDC38-208ENST00000549876 ADAM21Q9UKJ8 722 aa5.62□□□□□ -1.51
CCDC38-208ENST00000549876 SBNO2Q9Y2G9 1366 aa5.62□□□□□ -1.51
CCDC38-208ENST00000549876 PRAMEF33A0A0G2JMD5 474 aa5.61□□□□□ -1.51
CCDC38-208ENST00000549876 PRAMEF10O60809 474 aa5.61□□□□□ -1.51
CCDC38-208ENST00000549876 MT-CO1P00395 513 aa5.61□□□□□ -1.51
CCDC38-208ENST00000549876 MTMR1Q13613 665 aa5.61□□□□□ -1.51
CCDC38-208ENST00000549876 SYDE2Q5VT97 1194 aa5.61□□□□□ -1.51
CCDC38-208ENST00000549876 FCRLBQ6BAA4 426 aa5.61□□□□□ -1.51
CCDC38-208ENST00000549876 SLC30A5Q8TAD4 765 aa5.61□□□□□ -1.51
CCDC38-208ENST00000549876 IFI44Q8TCB0 444 aa5.61□□□□□ -1.51
CCDC38-208ENST00000549876 TMEM125Q96AQ2 219 aa5.61□□□□□ -1.51
CCDC38-208ENST00000549876 CCDC8Q9H0W5 538 aaPredicted RBP5.61□□□□□ -1.51
CCDC38-208ENST00000549876 MKS1Q9NXB0 559 aa5.61□□□□□ -1.51
CCDC38-208ENST00000549876 FLRT1Q9NZU1 646 aa5.61□□□□□ -1.51
CCDC38-208ENST00000549876 TRHDEQ9UKU6 1024 aa5.61□□□□□ -1.51
CCDC38-208ENST00000549876 CADPSQ9ULU8 1353 aa5.61□□□□□ -1.51
CCDC38-208ENST00000549876 LIMCH1Q9UPQ0 1083 aa5.61□□□□□ -1.51
CCDC38-208ENST00000549876 IPPQ9Y573 584 aa5.61□□□□□ -1.51
CCDC38-208ENST00000549876 ADM5C9JUS6 153 aa5.6□□□□□ -1.51
CCDC38-208ENST00000549876 HTRA2O43464 458 aaPredicted RBP5.6□□□□□ -1.51
CCDC38-208ENST00000549876 CDKN1CP49918 316 aaPredicted RBP5.6□□□□□ -1.51
CCDC38-208ENST00000549876 CDC42EP1Q00587 391 aa5.6□□□□□ -1.51
CCDC38-208ENST00000549876 CREMQ03060 361 aa5.6□□□□□ -1.51
CCDC38-208ENST00000549876 EZH2Q15910 746 aaKnown RBP5.6□□□□□ -1.51
CCDC38-208ENST00000549876 TSHZ1Q6ZSZ6 1077 aa5.6□□□□□ -1.51
CCDC38-208ENST00000549876 PDPRQ8NCN5 879 aa5.6□□□□□ -1.51
CCDC38-208ENST00000549876 NLGN4YQ8NFZ3 816 aaPredicted RBP5.6□□□□□ -1.51
CCDC38-208ENST00000549876 DMRTA2Q96SC8 542 aa5.6□□□□□ -1.51
CCDC38-208ENST00000549876 TLR10Q9BXR5 811 aa5.6□□□□□ -1.51
CCDC38-208ENST00000549876 CTTNBP2NLQ9P2B4 639 aa5.6□□□□□ -1.51
CCDC38-208ENST00000549876 WNT6Q9Y6F9 365 aa5.6□□□□□ -1.51
CCDC38-208ENST00000549876 KAT6AQ92794 2004 aa5.6□□□□□ -1.51
CCDC38-208ENST00000549876 GRM6O15303 877 aa5.59□□□□□ -1.51
CCDC38-208ENST00000549876 KCNA2P16389 499 aa5.59□□□□□ -1.51
CCDC38-208ENST00000549876 GUCY2FP51841 1108 aa5.59□□□□□ -1.51
CCDC38-208ENST00000549876 ZNF280AP59817 542 aaPredicted RBP5.59□□□□□ -1.51
CCDC38-208ENST00000549876 RPS7P62081 194 aaKnown RBP5.59□□□□□ -1.51
CCDC38-208ENST00000549876 AMPD3Q01432 767 aa5.59□□□□□ -1.51
CCDC38-208ENST00000549876 EXOSC10Q01780 885 aaKnown RBP5.59□□□□□ -1.51
CCDC38-208ENST00000549876 IL10RAQ13651 578 aa5.59□□□□□ -1.51
CCDC38-208ENST00000549876 ACAP2Q15057 778 aa5.59□□□□□ -1.51
CCDC38-208ENST00000549876 PCBP2Q15366 365 aaKnown RBP eCLIP5.59□□□□□ -1.51
CCDC38-208ENST00000549876 SRSF7Q16629 238 aaKnown RBP eCLIP5.59□□□□□ -1.51
CCDC38-208ENST00000549876 TXNRD1Q16881 649 aa5.59□□□□□ -1.51
CCDC38-208ENST00000549876 ABCB5Q2M3G0 1257 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms