RNA–Protein interactions for RNA: ENST00000549525.1

COX6A1-202, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

Gene COX6A1, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-202ENST00000549525 TPM3P06753 285 aa7.27□□□□□ -1.25
COX6A1-202ENST00000549525 GJB1P08034 283 aa7.27□□□□□ -1.25
COX6A1-202ENST00000549525 CCDC192P0DO97 292 aa7.27□□□□□ -1.25
COX6A1-202ENST00000549525 GNAT1P11488 350 aa7.27□□□□□ -1.25
COX6A1-202ENST00000549525 UBA1P22314 1058 aaKnown RBP7.27□□□□□ -1.25
COX6A1-202ENST00000549525 ADCYAP1R1P41586 468 aa7.27□□□□□ -1.25
COX6A1-202ENST00000549525 PMS1P54277 932 aaKnown RBP7.27□□□□□ -1.25
COX6A1-202ENST00000549525 GJA9P57773 515 aa7.27□□□□□ -1.25
COX6A1-202ENST00000549525 NKX3-2P78367 333 aa7.27□□□□□ -1.25
COX6A1-202ENST00000549525 EPHA7Q15375 998 aa7.27□□□□□ -1.25
COX6A1-202ENST00000549525 FSCN1Q16658 493 aaKnown RBP7.27□□□□□ -1.25
COX6A1-202ENST00000549525 PRAMEF19Q5SWL8 479 aa7.27□□□□□ -1.25
COX6A1-202ENST00000549525 TDRD10Q5VZ19 366 aaKnown RBP7.27□□□□□ -1.25
COX6A1-202ENST00000549525 ADALQ6DHV7 355 aa7.27□□□□□ -1.25
COX6A1-202ENST00000549525 PLPPR4Q7Z2D5 763 aa7.27□□□□□ -1.25
COX6A1-202ENST00000549525 MIER3Q7Z3K6 550 aa7.27□□□□□ -1.25
COX6A1-202ENST00000549525 FAM169BQ8N8A8 192 aa7.27□□□□□ -1.25
COX6A1-202ENST00000549525 IGSF22Q8N9C0 903 aa7.27□□□□□ -1.25
COX6A1-202ENST00000549525 HAS1Q92839 578 aa7.27□□□□□ -1.25
COX6A1-202ENST00000549525 GLG1Q92896 1179 aa7.27□□□□□ -1.25
COX6A1-202ENST00000549525 LENG9Q96B70 501 aa7.27□□□□□ -1.25
COX6A1-202ENST00000549525 FAM167AQ96KS9 214 aa7.27□□□□□ -1.25
COX6A1-202ENST00000549525 CCDC43Q96MW1 224 aaKnown RBP7.27□□□□□ -1.25
COX6A1-202ENST00000549525 USP28Q96RU2 1077 aa7.27□□□□□ -1.25
COX6A1-202ENST00000549525 LRRC27Q9C0I9 530 aa7.27□□□□□ -1.25
COX6A1-202ENST00000549525 MKRN2Q9H000 416 aaKnown RBP7.27□□□□□ -1.25
COX6A1-202ENST00000549525 KATNBL1Q9H079 304 aa7.27□□□□□ -1.25
COX6A1-202ENST00000549525 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.27□□□□□ -1.25
COX6A1-202ENST00000549525 ZSWIM4Q9H7M6 989 aa7.27□□□□□ -1.25
COX6A1-202ENST00000549525 TUFT1Q9NNX1 390 aa7.27□□□□□ -1.25
COX6A1-202ENST00000549525 NRBP2Q9NSY0 501 aa7.27□□□□□ -1.25
COX6A1-202ENST00000549525 ERAP1Q9NZ08 941 aa7.27□□□□□ -1.25
COX6A1-202ENST00000549525 USP25Q9UHP3 1055 aa7.27□□□□□ -1.25
COX6A1-202ENST00000549525 KCNG1Q9UIX4 513 aa7.27□□□□□ -1.25
COX6A1-202ENST00000549525 HOOK1Q9UJC3 728 aaKnown RBP7.27□□□□□ -1.25
COX6A1-202ENST00000549525 CTNND2Q9UQB3 1225 aa7.27□□□□□ -1.25
COX6A1-202ENST00000549525 CLIC4Q9Y696 253 aa7.27□□□□□ -1.25
COX6A1-202ENST00000549525 PLXNA1Q9UIW2 1896 aa7.27□□□□□ -1.25
COX6A1-202ENST00000549525 DOCK3Q8IZD9 2030 aa7.27□□□□□ -1.25
COX6A1-202ENST00000549525 FARP2O94887 1054 aaPredicted RBP7.26□□□□□ -1.25
COX6A1-202ENST00000549525 PRAMEF1O95521 474 aa7.26□□□□□ -1.25
COX6A1-202ENST00000549525 C6orf222P0C671 652 aaPredicted RBP7.26□□□□□ -1.25
COX6A1-202ENST00000549525 CCL5P13501 91 aa7.26□□□□□ -1.25
COX6A1-202ENST00000549525 CMA1P23946 247 aa7.26□□□□□ -1.25
COX6A1-202ENST00000549525 RPA1P27694 616 aa7.26□□□□□ -1.25
COX6A1-202ENST00000549525 CST5P28325 142 aaPredicted RBP7.26□□□□□ -1.25
COX6A1-202ENST00000549525 QARSP47897 775 aaKnown RBP7.26□□□□□ -1.25
COX6A1-202ENST00000549525 ACTR2P61160 394 aa7.26□□□□□ -1.25
COX6A1-202ENST00000549525 PSMC5P62195 406 aa7.26□□□□□ -1.25
COX6A1-202ENST00000549525 AMPD3Q01432 767 aa7.26□□□□□ -1.25
COX6A1-202ENST00000549525 DHX8Q14562 1220 aaKnown RBP7.26□□□□□ -1.25
COX6A1-202ENST00000549525 RALGPS1Q5JS13 557 aa7.26□□□□□ -1.25
COX6A1-202ENST00000549525 NCAPH2Q6IBW4 605 aa7.26□□□□□ -1.25
COX6A1-202ENST00000549525 CCDC73Q6ZRK6 1079 aa7.26□□□□□ -1.25
COX6A1-202ENST00000549525 CKAP2LQ8IYA6 745 aa7.26□□□□□ -1.25
COX6A1-202ENST00000549525 C4orf32Q8N8J7 132 aa7.26□□□□□ -1.25
COX6A1-202ENST00000549525 SH3TC2Q8TF17 1288 aa7.26□□□□□ -1.25
COX6A1-202ENST00000549525 LEO1Q8WVC0 666 aaPredicted RBP7.26□□□□□ -1.25
COX6A1-202ENST00000549525 ZNF333Q96JL9 665 aa7.26□□□□□ -1.25
COX6A1-202ENST00000549525 DHRS1Q96LJ7 313 aa7.26□□□□□ -1.25
COX6A1-202ENST00000549525 GLT1D1Q96MS3 346 aa7.26□□□□□ -1.25
COX6A1-202ENST00000549525 JPH2Q9BR39 696 aaPredicted RBP7.26□□□□□ -1.25
COX6A1-202ENST00000549525 POLR3CQ9BUI4 534 aaPredicted RBP7.26□□□□□ -1.25
COX6A1-202ENST00000549525 UPF3AQ9H1J1 476 aaKnown RBP7.26□□□□□ -1.25
COX6A1-202ENST00000549525 CUEDC2Q9H467 287 aa7.26□□□□□ -1.25
COX6A1-202ENST00000549525 PDGFCQ9NRA1 345 aa7.26□□□□□ -1.25
COX6A1-202ENST00000549525 SLAMF8Q9P0V8 285 aa7.26□□□□□ -1.25
COX6A1-202ENST00000549525 DNM3Q9UQ16 869 aa7.26□□□□□ -1.25
COX6A1-202ENST00000549525 A0A1W2PQ27 194 aa7.25□□□□□ -1.25
COX6A1-202ENST00000549525 A0A1W2PQ64 194 aa7.25□□□□□ -1.25
COX6A1-202ENST00000549525 A0A1W2PQD8 194 aa7.25□□□□□ -1.25
COX6A1-202ENST00000549525 A0A1W2PQH9 124 aa7.25□□□□□ -1.25
COX6A1-202ENST00000549525 RRN3P2A6NIE6 340 aa7.25□□□□□ -1.25
COX6A1-202ENST00000549525 DNM1LO00429 736 aa7.25□□□□□ -1.25
COX6A1-202ENST00000549525 ADAMTS3O15072 1205 aa7.25□□□□□ -1.25
COX6A1-202ENST00000549525 CHMP2AO43633 222 aa7.25□□□□□ -1.25
COX6A1-202ENST00000549525 ATP9AO75110 1047 aa7.25□□□□□ -1.25
COX6A1-202ENST00000549525 SGPL1O95470 568 aa7.25□□□□□ -1.25
COX6A1-202ENST00000549525 SUPT20HL2P0C7V6 817 aa7.25□□□□□ -1.25
COX6A1-202ENST00000549525 MARCKSP29966 332 aaPredicted RBP7.25□□□□□ -1.25
COX6A1-202ENST00000549525 CCND3P30281 292 aaPredicted RBP7.25□□□□□ -1.25
COX6A1-202ENST00000549525 TCF7P36402 384 aaPredicted RBP7.25□□□□□ -1.25
COX6A1-202ENST00000549525 CCT6AP40227 531 aaKnown RBP7.25□□□□□ -1.25
COX6A1-202ENST00000549525 STAT5BP51692 787 aa7.25□□□□□ -1.25
COX6A1-202ENST00000549525 CDC42EP1Q00587 391 aa7.25□□□□□ -1.25
COX6A1-202ENST00000549525 SP2Q02086 613 aa7.25□□□□□ -1.25
COX6A1-202ENST00000549525 EGR3Q06889 387 aa7.25□□□□□ -1.25
COX6A1-202ENST00000549525 ARHGAP1Q07960 439 aa7.25□□□□□ -1.25
COX6A1-202ENST00000549525 ITGB3BPQ13352 177 aaPredicted RBP7.25□□□□□ -1.25
COX6A1-202ENST00000549525 AUHQ13825 339 aaKnown RBP7.25□□□□□ -1.25
COX6A1-202ENST00000549525 PTPAQ15257 358 aa7.25□□□□□ -1.25
COX6A1-202ENST00000549525 CLEC16AQ2KHT3 1053 aa7.25□□□□□ -1.25
COX6A1-202ENST00000549525 XKR3Q5GH77 459 aa7.25□□□□□ -1.25
COX6A1-202ENST00000549525 SWSAP1Q6NVH7 229 aa7.25□□□□□ -1.25
COX6A1-202ENST00000549525 FAM173BQ6P4H8 233 aa7.25□□□□□ -1.25
COX6A1-202ENST00000549525 ABHD15Q6UXT9 468 aa7.25□□□□□ -1.25
COX6A1-202ENST00000549525 ATG4DQ86TL0 474 aaPredicted RBP7.25□□□□□ -1.25
COX6A1-202ENST00000549525 TPH2Q8IWU9 490 aa7.25□□□□□ -1.25
COX6A1-202ENST00000549525 C19orf47Q8N9M1 422 aaKnown RBP7.25□□□□□ -1.25
COX6A1-202ENST00000549525 IQUBQ8NA54 791 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms